RNA–Protein interactions for RNA: ENST00000498474.2

PUDP-205, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 4

Gene PUDP, Length 1,040 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-205ENST00000498474 NR6A1Q15406 480 aa10.01□□□□□ -0.81
PUDP-205ENST00000498474 MEIOBQ8N635 442 aa10.01□□□□□ -0.81
PUDP-205ENST00000498474 ANKRD44Q8N8A2 993 aa10.01□□□□□ -0.81
PUDP-205ENST00000498474 MAP4K5Q9Y4K4 846 aa10.01□□□□□ -0.81
PUDP-205ENST00000498474 KIF23Q02241 960 aaPredicted RBP10□□□□□ -0.81
PUDP-205ENST00000498474 LINC00528Q8N1L1 170 aa10□□□□□ -0.81
PUDP-205ENST00000498474 OGFOD1Q8N543 542 aa10□□□□□ -0.81
PUDP-205ENST00000498474 HHIPL1Q96JK4 782 aa10□□□□□ -0.81
PUDP-205ENST00000498474 GNL3Q9BVP2 549 aaKnown RBP eCLIP10□□□□□ -0.81
PUDP-205ENST00000498474 IQSEC3Q9UPP2 1182 aaPredicted RBP10□□□□□ -0.81
PUDP-205ENST00000498474 CLRN2A0PK11 232 aa9.99□□□□□ -0.81
PUDP-205ENST00000498474 MAN1A2O60476 641 aa9.99□□□□□ -0.81
PUDP-205ENST00000498474 IL1R1P14778 569 aa9.99□□□□□ -0.81
PUDP-205ENST00000498474 GRIK5Q16478 980 aa9.99□□□□□ -0.81
PUDP-205ENST00000498474 SH3D19Q5HYK7 790 aa9.99□□□□□ -0.81
PUDP-205ENST00000498474 ZNF804AQ7Z570 1209 aa9.99□□□□□ -0.81
PUDP-205ENST00000498474 TRMT2AQ8IZ69 625 aaKnown RBP9.99□□□□□ -0.81
PUDP-205ENST00000498474 USP44Q9H0E7 712 aa9.99□□□□□ -0.81
PUDP-205ENST00000498474 SMC4Q9NTJ3 1288 aa9.99□□□□□ -0.81
PUDP-205ENST00000498474 RIPOR2Q9Y4F9 1068 aa9.99□□□□□ -0.81
PUDP-205ENST00000498474 UTYO14607 1347 aa9.99□□□□□ -0.81
PUDP-205ENST00000498474 ECM29Q5VYK3 1845 aa9.98□□□□□ -0.81
PUDP-205ENST00000498474 TRPA1O75762 1119 aa9.98□□□□□ -0.81
PUDP-205ENST00000498474 BRPF1P55201 1214 aaPredicted RBP9.98□□□□□ -0.81
PUDP-205ENST00000498474 NOGQ13253 232 aa9.98□□□□□ -0.81
PUDP-205ENST00000498474 CFAP100Q494V2 611 aa9.98□□□□□ -0.81
PUDP-205ENST00000498474 C15orf52Q6ZUT6 534 aaKnown RBP9.98□□□□□ -0.81
PUDP-205ENST00000498474 RASAL3Q86YV0 1011 aa9.98□□□□□ -0.81
PUDP-205ENST00000498474 ZBED3Q96IU2 234 aaPredicted RBP9.98□□□□□ -0.81
PUDP-205ENST00000498474 FAM84BQ96KN1 310 aaPredicted RBP9.98□□□□□ -0.81
PUDP-205ENST00000498474 FKBPLQ9UIM3 349 aa9.98□□□□□ -0.81
PUDP-205ENST00000498474 HDAC9Q9UKV0 1011 aa9.98□□□□□ -0.81
PUDP-205ENST00000498474 NOB1Q9ULX3 412 aaKnown RBP9.98□□□□□ -0.81
PUDP-205ENST00000498474 PTPRCP08575 1304 aa9.98□□□□□ -0.81
PUDP-205ENST00000498474 MYO3BQ8WXR4 1341 aa9.98□□□□□ -0.81
PUDP-205ENST00000498474 PITPNM2Q9BZ72 1349 aa9.98□□□□□ -0.81
PUDP-205ENST00000498474 PAPPA2Q9BXP8 1791 aa9.98□□□□□ -0.81
PUDP-205ENST00000498474 RBM5P52756 815 aaKnown RBP eCLIP9.97□□□□□ -0.81
PUDP-205ENST00000498474 CHAF1AQ13111 956 aaPredicted RBP9.97□□□□□ -0.81
PUDP-205ENST00000498474 DLGAP5Q15398 846 aa9.97□□□□□ -0.81
PUDP-205ENST00000498474 RABL6Q3YEC7 729 aaPredicted RBP9.97□□□□□ -0.81
PUDP-205ENST00000498474 METTL24Q5JXM2 366 aa9.97□□□□□ -0.81
PUDP-205ENST00000498474 PDXDC2PQ6P474 469 aa9.97□□□□□ -0.81
PUDP-205ENST00000498474 CCDC116Q8IYX3 515 aa9.97□□□□□ -0.81
PUDP-205ENST00000498474 EPS8L1Q8TE68 723 aa9.97□□□□□ -0.81
PUDP-205ENST00000498474 GPKOWQ92917 476 aaPredicted RBP eCLIP9.97□□□□□ -0.81
PUDP-205ENST00000498474 PRMT6Q96LA8 375 aaPredicted RBP9.97□□□□□ -0.81
PUDP-205ENST00000498474 CSRNP1Q96S65 589 aa9.97□□□□□ -0.81
PUDP-205ENST00000498474 OCSTAMPQ9BR26 566 aa9.97□□□□□ -0.81
PUDP-205ENST00000498474 ARHGAP9Q9BRR9 750 aa9.97□□□□□ -0.81
PUDP-205ENST00000498474 DNMT3LQ9UJW3 386 aa9.97□□□□□ -0.81
PUDP-205ENST00000498474 TNNQ9UQP3 1299 aa9.97□□□□□ -0.81
PUDP-205ENST00000498474 CCER2I3L3R5 266 aa9.96□□□□□ -0.82
PUDP-205ENST00000498474 AP1G2O75843 785 aa9.96□□□□□ -0.82
PUDP-205ENST00000498474 UPP2O95045 317 aa9.96□□□□□ -0.82
PUDP-205ENST00000498474 HIBADHP31937 336 aaKnown RBP9.96□□□□□ -0.82
PUDP-205ENST00000498474 PTPN12Q05209 780 aaKnown RBP9.96□□□□□ -0.82
PUDP-205ENST00000498474 CBLBQ13191 982 aa9.96□□□□□ -0.82
PUDP-205ENST00000498474 UBE4AQ14139 1066 aa9.96□□□□□ -0.82
PUDP-205ENST00000498474 ALDH1L2Q3SY69 923 aa9.96□□□□□ -0.82
PUDP-205ENST00000498474 PPP1R26Q5T8A7 1209 aaPredicted RBP9.96□□□□□ -0.82
PUDP-205ENST00000498474 PPP2R2DQ66LE6 453 aa9.96□□□□□ -0.82
PUDP-205ENST00000498474 TDRD7Q8NHU6 1098 aaKnown RBP9.96□□□□□ -0.82
PUDP-205ENST00000498474 ABHD8Q96I13 439 aa9.96□□□□□ -0.82
PUDP-205ENST00000498474 SIL1Q9H173 461 aa9.96□□□□□ -0.82
PUDP-205ENST00000498474 VEZTQ9HBM0 779 aa9.96□□□□□ -0.82
PUDP-205ENST00000498474 RNF186Q9NXI6 227 aa9.96□□□□□ -0.82
PUDP-205ENST00000498474 CENPFP49454 3210 aa9.96□□□□□ -0.82
PUDP-205ENST00000498474 RFX5P48382 616 aaPredicted RBP9.95□□□□□ -0.82
PUDP-205ENST00000498474 MFSD14BQ5SR56 506 aa9.95□□□□□ -0.82
PUDP-205ENST00000498474 FBXO33Q7Z6M2 555 aa9.95□□□□□ -0.82
PUDP-205ENST00000498474 APOBEC3FQ8IUX4 373 aaKnown RBP9.95□□□□□ -0.82
PUDP-205ENST00000498474 VGLL2Q8N8G2 317 aa9.95□□□□□ -0.82
PUDP-205ENST00000498474 ZSCAN1Q8NBB4 408 aa9.95□□□□□ -0.82
PUDP-205ENST00000498474 DEFB129Q9H1M3 183 aa9.95□□□□□ -0.82
PUDP-205ENST00000498474 ANGEL1Q9UNK9 670 aaKnown RBP9.95□□□□□ -0.82
PUDP-205ENST00000498474 TTF2Q9UNY4 1162 aaKnown RBP9.95□□□□□ -0.82
PUDP-205ENST00000498474 PA2G4Q9UQ80 394 aaKnown RBP9.95□□□□□ -0.82
PUDP-205ENST00000498474 MYH13Q9UKX3 1938 aa9.95□□□□□ -0.82
PUDP-205ENST00000498474 ARAP2Q8WZ64 1704 aa9.94□□□□□ -0.82
PUDP-205ENST00000498474 SSC5DA1L4H1 1573 aa9.94□□□□□ -0.82
PUDP-205ENST00000498474 FAM205AQ6ZU69 1335 aa9.94□□□□□ -0.82
PUDP-205ENST00000498474 MROH5Q6ZUA9 1318 aa9.94□□□□□ -0.82
PUDP-205ENST00000498474 CCDC85CA6NKD9 419 aa9.94□□□□□ -0.82
PUDP-205ENST00000498474 RARSP54136 660 aaKnown RBP9.94□□□□□ -0.82
PUDP-205ENST00000498474 NBPF12Q5TAG4 269 aaPredicted RBP9.94□□□□□ -0.82
PUDP-205ENST00000498474 VPS37DQ86XT2 251 aa9.94□□□□□ -0.82
PUDP-205ENST00000498474 MTMR14Q8NCE2 650 aa9.94□□□□□ -0.82
PUDP-205ENST00000498474 DDRGK1Q96HY6 314 aa9.94□□□□□ -0.82
PUDP-205ENST00000498474 CLMNQ96JQ2 1002 aa9.94□□□□□ -0.82
PUDP-205ENST00000498474 MEIS3Q99687 375 aa9.94□□□□□ -0.82
PUDP-205ENST00000498474 MCOLN1Q9GZU1 580 aa9.94□□□□□ -0.82
PUDP-205ENST00000498474 TDRD3Q9H7E2 651 aaKnown RBP9.94□□□□□ -0.82
PUDP-205ENST00000498474 CA12O43570 354 aa9.93□□□□□ -0.82
PUDP-205ENST00000498474 PPFIA3O75145 1194 aa9.93□□□□□ -0.82
PUDP-205ENST00000498474 FRAT2O75474 233 aaPredicted RBP9.93□□□□□ -0.82
PUDP-205ENST00000498474 BCAR3O75815 825 aa9.93□□□□□ -0.82
PUDP-205ENST00000498474 PDE8BO95263 885 aa9.93□□□□□ -0.82
PUDP-205ENST00000498474 TBC1D8O95759 1140 aa9.93□□□□□ -0.82
PUDP-205ENST00000498474 NF2P35240 595 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms