RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 ATL2Q8NHH9 583 aa11.07□□□□□ -0.64
SNX13-212ENST00000498463 RELTQ969Z4 430 aa11.07□□□□□ -0.64
SNX13-212ENST00000498463 ADAM30Q9UKF2 790 aa11.07□□□□□ -0.64
SNX13-212ENST00000498463 TRAV20A0A0B4J274 112 aa11.06□□□□□ -0.64
SNX13-212ENST00000498463 PRAMEF27A3QJZ7 478 aa11.06□□□□□ -0.64
SNX13-212ENST00000498463 C2CD2LO14523 706 aa11.06□□□□□ -0.64
SNX13-212ENST00000498463 ZNF862O60290 1169 aa11.06□□□□□ -0.64
SNX13-212ENST00000498463 RAG1P15918 1043 aa11.06□□□□□ -0.64
SNX13-212ENST00000498463 GRK4P32298 578 aa11.06□□□□□ -0.64
SNX13-212ENST00000498463 POU4F3Q15319 338 aa11.06□□□□□ -0.64
SNX13-212ENST00000498463 NFE2Q16621 373 aaPredicted RBP11.06□□□□□ -0.64
SNX13-212ENST00000498463 AXDND1Q5T1B0 1012 aaPredicted RBP11.06□□□□□ -0.64
SNX13-212ENST00000498463 WASHC2CQ9Y4E1 1318 aa11.06□□□□□ -0.64
SNX13-212ENST00000498463 TRBV23-1A0A0A0MS06 115 aa11.05□□□□□ -0.64
SNX13-212ENST00000498463 DCDC2CA8MYV0 355 aa11.05□□□□□ -0.64
SNX13-212ENST00000498463 CHURC1-FNTBB4DL54 471 aa11.05□□□□□ -0.64
SNX13-212ENST00000498463 GPR25O00155 361 aa11.05□□□□□ -0.64
SNX13-212ENST00000498463 TSPAN6O43657 245 aa11.05□□□□□ -0.64
SNX13-212ENST00000498463 EIF4EBP3O60516 100 aaPredicted RBP11.05□□□□□ -0.64
SNX13-212ENST00000498463 PGRP06401 933 aa11.05□□□□□ -0.64
SNX13-212ENST00000498463 ARAFP10398 606 aa11.05□□□□□ -0.64
SNX13-212ENST00000498463 MAOBP27338 520 aa11.05□□□□□ -0.64
SNX13-212ENST00000498463 ZNF143P52747 638 aaPredicted RBP11.05□□□□□ -0.64
SNX13-212ENST00000498463 C19orf57Q0VDD7 668 aa11.05□□□□□ -0.64
SNX13-212ENST00000498463 BBS9Q3SYG4 887 aa11.05□□□□□ -0.64
SNX13-212ENST00000498463 LRRTM3Q86VH5 581 aa11.05□□□□□ -0.64
SNX13-212ENST00000498463 WDR75Q8IWA0 830 aaKnown RBP11.05□□□□□ -0.64
SNX13-212ENST00000498463 CACTIN-AS1Q8N1I8 211 aa11.05□□□□□ -0.64
SNX13-212ENST00000498463 IPO9Q96P70 1041 aaKnown RBP11.05□□□□□ -0.64
SNX13-212ENST00000498463 DNAJC25-GNG10A0A024R161 153 aa11.04□□□□□ -0.64
SNX13-212ENST00000498463 NAT2P11245 290 aa11.04□□□□□ -0.64
SNX13-212ENST00000498463 BMP4P12644 408 aa11.04□□□□□ -0.64
SNX13-212ENST00000498463 GUCY2FP51841 1108 aa11.04□□□□□ -0.64
SNX13-212ENST00000498463 PIP4K2BP78356 416 aa11.04□□□□□ -0.64
SNX13-212ENST00000498463 PSAPL1Q6NUJ1 521 aa11.04□□□□□ -0.64
SNX13-212ENST00000498463 CNNM4Q6P4Q7 775 aa11.04□□□□□ -0.64
SNX13-212ENST00000498463 TXNDC11Q6PKC3 985 aa11.04□□□□□ -0.64
SNX13-212ENST00000498463 CRIPAKQ8N1N5 446 aa11.04□□□□□ -0.64
SNX13-212ENST00000498463 TTC9Q92623 222 aa11.04□□□□□ -0.64
SNX13-212ENST00000498463 ACSF2Q96CM8 615 aaPredicted RBP11.04□□□□□ -0.64
SNX13-212ENST00000498463 AARSD1Q9BTE6 412 aaKnown RBP11.04□□□□□ -0.64
SNX13-212ENST00000498463 MRPL4Q9BYD3 311 aaKnown RBP11.04□□□□□ -0.64
SNX13-212ENST00000498463 ATP13A2Q9NQ11 1180 aa11.04□□□□□ -0.64
SNX13-212ENST00000498463 AVENQ9NQS1 362 aaPredicted RBP11.04□□□□□ -0.64
SNX13-212ENST00000498463 INTS7Q9NVH2 962 aaKnown RBP11.04□□□□□ -0.64
SNX13-212ENST00000498463 DACH1Q9UI36 760 aa11.04□□□□□ -0.64
SNX13-212ENST00000498463 ADARB2-AS1A8MUL3 147 aa11.03□□□□□ -0.64
SNX13-212ENST00000498463 SDSP20132 328 aa11.03□□□□□ -0.64
SNX13-212ENST00000498463 HNRNPUQ00839 825 aaKnown RBP eCLIP11.03□□□□□ -0.64
SNX13-212ENST00000498463 PDE3AQ14432 1141 aa11.03□□□□□ -0.64
SNX13-212ENST00000498463 HSP90AA2PQ14568 343 aaPredicted RBP11.03□□□□□ -0.64
SNX13-212ENST00000498463 FOXR1Q6PIV2 292 aa11.03□□□□□ -0.64
SNX13-212ENST00000498463 PPFIBP1Q86W92 1011 aa11.03□□□□□ -0.64
SNX13-212ENST00000498463 RIN3Q8TB24 985 aa11.03□□□□□ -0.64
SNX13-212ENST00000498463 ZNF526Q8TF50 670 aaPredicted RBP11.03□□□□□ -0.64
SNX13-212ENST00000498463 FAM86C1Q9NVL1 165 aa11.03□□□□□ -0.64
SNX13-212ENST00000498463 SUSD2Q9UGT4 822 aa11.03□□□□□ -0.64
SNX13-212ENST00000498463 ANKRD34BA5PLL1 514 aa11.02□□□□□ -0.65
SNX13-212ENST00000498463 CTSBP07858 339 aa11.02□□□□□ -0.65
SNX13-212ENST00000498463 ARL4DP49703 201 aa11.02□□□□□ -0.65
SNX13-212ENST00000498463 PMS1P54277 932 aaKnown RBP11.02□□□□□ -0.65
SNX13-212ENST00000498463 RHBDL3P58872 404 aa11.02□□□□□ -0.65
SNX13-212ENST00000498463 PPP2R5AQ15172 486 aa11.02□□□□□ -0.65
SNX13-212ENST00000498463 STRA8Q7Z7C7 330 aa11.02□□□□□ -0.65
SNX13-212ENST00000498463 SCUBE1Q8IWY4 988 aa11.02□□□□□ -0.65
SNX13-212ENST00000498463 WNT8BQ93098 351 aa11.02□□□□□ -0.65
SNX13-212ENST00000498463 WDR89Q96FK6 387 aaPredicted RBP11.02□□□□□ -0.65
SNX13-212ENST00000498463 MDFIQ99750 246 aa11.02□□□□□ -0.65
SNX13-212ENST00000498463 KLF15Q9UIH9 416 aa11.02□□□□□ -0.65
SNX13-212ENST00000498463 KATNA1O75449 491 aa11.01□□□□□ -0.65
SNX13-212ENST00000498463 LIG1P18858 919 aa11.01□□□□□ -0.65
SNX13-212ENST00000498463 PPP2R2AP63151 447 aa11.01□□□□□ -0.65
SNX13-212ENST00000498463 KIF4BQ2VIQ3 1234 aa11.01□□□□□ -0.65
SNX13-212ENST00000498463 CCSAPQ6IQ19 270 aaPredicted RBP11.01□□□□□ -0.65
SNX13-212ENST00000498463 C12orf40Q86WS4 652 aa11.01□□□□□ -0.65
SNX13-212ENST00000498463 IL22RA1Q8N6P7 574 aa11.01□□□□□ -0.65
SNX13-212ENST00000498463 DHRS1Q96LJ7 313 aa11.01□□□□□ -0.65
SNX13-212ENST00000498463 SLC6A18Q96N87 628 aa11.01□□□□□ -0.65
SNX13-212ENST00000498463 ASPSCR1Q9BZE9 553 aa11.01□□□□□ -0.65
SNX13-212ENST00000498463 CSADQ9Y600 493 aa11.01□□□□□ -0.65
SNX13-212ENST00000498463 KIF3BO15066 747 aa11□□□□□ -0.65
SNX13-212ENST00000498463 EYA4O95677 639 aa11□□□□□ -0.65
SNX13-212ENST00000498463 EPHX1P07099 455 aa11□□□□□ -0.65
SNX13-212ENST00000498463 ADH6P28332 368 aa11□□□□□ -0.65
SNX13-212ENST00000498463 ETF1P62495 437 aaKnown RBP11□□□□□ -0.65
SNX13-212ENST00000498463 SUMO1P63165 101 aaKnown RBP11□□□□□ -0.65
SNX13-212ENST00000498463 MCL1Q07820 350 aa11□□□□□ -0.65
SNX13-212ENST00000498463 MAP7Q14244 749 aa11□□□□□ -0.65
SNX13-212ENST00000498463 TDRD10Q5VZ19 366 aaKnown RBP11□□□□□ -0.65
SNX13-212ENST00000498463 TMEM192Q8IY95 271 aa11□□□□□ -0.65
SNX13-212ENST00000498463 PPM1KQ8N3J5 372 aa11□□□□□ -0.65
SNX13-212ENST00000498463 FAM13CQ8NE31 585 aa11□□□□□ -0.65
SNX13-212ENST00000498463 HAUS7Q99871 368 aa11□□□□□ -0.65
SNX13-212ENST00000498463 LRP2BPQ9P2M1 347 aa11□□□□□ -0.65
SNX13-212ENST00000498463 SUCOQ9UBS9 1254 aaKnown RBP11□□□□□ -0.65
SNX13-212ENST00000498463 SFMBT1Q9UHJ3 866 aa11□□□□□ -0.65
SNX13-212ENST00000498463 FAM83GA6ND36 823 aa10.99□□□□□ -0.65
SNX13-212ENST00000498463 RASGRP1O95267 797 aa10.99□□□□□ -0.65
SNX13-212ENST00000498463 CPEP16870 476 aa10.99□□□□□ -0.65
SNX13-212ENST00000498463 GNALP38405 381 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms