RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 UBE2Q2LH0YL09 131 aa13.56□□□□□ -0.24
CTTN-208ENST00000498223 SLC27A2O14975 620 aa13.56□□□□□ -0.24
CTTN-208ENST00000498223 RANBP6O60518 1105 aaKnown RBP13.56□□□□□ -0.24
CTTN-208ENST00000498223 PRDM1O75626 825 aa13.56□□□□□ -0.24
CTTN-208ENST00000498223 SEC24BO95487 1268 aa13.56□□□□□ -0.24
CTTN-208ENST00000498223 ZKSCAN1P17029 563 aaPredicted RBP13.56□□□□□ -0.24
CTTN-208ENST00000498223 TRDNQ13061 729 aa13.56□□□□□ -0.24
CTTN-208ENST00000498223 AKNAD1Q5T1N1 836 aa13.56□□□□□ -0.24
CTTN-208ENST00000498223 CREB3L3Q68CJ9 461 aa13.56□□□□□ -0.24
CTTN-208ENST00000498223 CABP5Q9NP86 173 aa13.56□□□□□ -0.24
CTTN-208ENST00000498223 ANAPC4Q9UJX5 808 aa13.56□□□□□ -0.24
CTTN-208ENST00000498223 CSADQ9Y600 493 aa13.56□□□□□ -0.24
CTTN-208ENST00000498223 AOC2O75106 756 aa13.55□□□□□ -0.24
CTTN-208ENST00000498223 GDF11O95390 407 aa13.55□□□□□ -0.24
CTTN-208ENST00000498223 CYP21A2P08686 494 aa13.55□□□□□ -0.24
CTTN-208ENST00000498223 SHMT1P34896 483 aa13.55□□□□□ -0.24
CTTN-208ENST00000498223 FKBP1BP68106 108 aa13.55□□□□□ -0.24
CTTN-208ENST00000498223 MAP3K9P80192 1104 aa13.55□□□□□ -0.24
CTTN-208ENST00000498223 GABPAQ06546 454 aa13.55□□□□□ -0.24
CTTN-208ENST00000498223 RALYLQ86SE5 291 aaKnown RBP13.55□□□□□ -0.24
CTTN-208ENST00000498223 TBC1D10CQ8IV04 446 aa13.55□□□□□ -0.24
CTTN-208ENST00000498223 DNAJC18Q9H819 358 aa13.55□□□□□ -0.24
CTTN-208ENST00000498223 INCENPQ9NQS7 918 aa13.55□□□□□ -0.24
CTTN-208ENST00000498223 PICK1Q9NRD5 415 aa13.55□□□□□ -0.24
CTTN-208ENST00000498223 ROBO3Q96MS0 1386 aa13.55□□□□□ -0.24
CTTN-208ENST00000498223 TSPY2A6NKD2 308 aa13.54□□□□□ -0.24
CTTN-208ENST00000498223 EPB41L2O43491 1005 aaKnown RBP13.54□□□□□ -0.24
CTTN-208ENST00000498223 CA12O43570 354 aa13.54□□□□□ -0.24
CTTN-208ENST00000498223 CTNND1O60716 968 aaKnown RBP13.54□□□□□ -0.24
CTTN-208ENST00000498223 INPP5BP32019 993 aa13.54□□□□□ -0.24
CTTN-208ENST00000498223 HUNKP57058 714 aa13.54□□□□□ -0.24
CTTN-208ENST00000498223 MAP3K10Q02779 954 aa13.54□□□□□ -0.24
CTTN-208ENST00000498223 NOGQ13253 232 aa13.54□□□□□ -0.24
CTTN-208ENST00000498223 NECTIN1Q15223 517 aa13.54□□□□□ -0.24
CTTN-208ENST00000498223 ABCB5Q2M3G0 1257 aa13.54□□□□□ -0.24
CTTN-208ENST00000498223 METTL16Q86W50 562 aaKnown RBP13.54□□□□□ -0.24
CTTN-208ENST00000498223 ANKRD13AQ8IZ07 590 aa13.54□□□□□ -0.24
CTTN-208ENST00000498223 STAG1Q8WVM7 1258 aa13.54□□□□□ -0.24
CTTN-208ENST00000498223 ZKSCAN4Q969J2 545 aaPredicted RBP13.54□□□□□ -0.24
CTTN-208ENST00000498223 CCDC17Q96LX7 622 aa13.54□□□□□ -0.24
CTTN-208ENST00000498223 KRT23Q9C075 422 aa13.54□□□□□ -0.24
CTTN-208ENST00000498223 CNNM2Q9H8M5 875 aa13.54□□□□□ -0.24
CTTN-208ENST00000498223 TAOK2Q9UL54 1235 aa13.54□□□□□ -0.24
CTTN-208ENST00000498223 PHIPQ8WWQ0 1821 aa13.53□□□□□ -0.24
CTTN-208ENST00000498223 B4E1Z4 1266 aa13.53□□□□□ -0.24
CTTN-208ENST00000498223 E7EWF7 191 aa13.53□□□□□ -0.24
CTTN-208ENST00000498223 TSPY3P0CV98 308 aa13.53□□□□□ -0.24
CTTN-208ENST00000498223 TSPY8P0CW00 308 aa13.53□□□□□ -0.24
CTTN-208ENST00000498223 PCP11498 1178 aaKnown RBP13.53□□□□□ -0.24
CTTN-208ENST00000498223 RASA1P20936 1047 aa13.53□□□□□ -0.24
CTTN-208ENST00000498223 CAP2P40123 477 aa13.53□□□□□ -0.24
CTTN-208ENST00000498223 RAB3GAP1Q15042 981 aa13.53□□□□□ -0.24
CTTN-208ENST00000498223 FAM47AQ5JRC9 791 aa13.53□□□□□ -0.24
CTTN-208ENST00000498223 TATDN1Q6P1N9 297 aa13.53□□□□□ -0.24
CTTN-208ENST00000498223 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.53□□□□□ -0.24
CTTN-208ENST00000498223 NCOA7Q8NI08 942 aa13.53□□□□□ -0.24
CTTN-208ENST00000498223 ESR2Q92731 530 aa13.53□□□□□ -0.24
CTTN-208ENST00000498223 SLC10A4Q96EP9 437 aa13.53□□□□□ -0.24
CTTN-208ENST00000498223 BACH2Q9BYV9 841 aa13.53□□□□□ -0.24
CTTN-208ENST00000498223 ELP3Q9H9T3 547 aa13.53□□□□□ -0.24
CTTN-208ENST00000498223 NEDD4P46934 1319 aa13.53□□□□□ -0.24
CTTN-208ENST00000498223 PHF20L1A8MW92 1017 aa13.52□□□□□ -0.25
CTTN-208ENST00000498223 GH2P01242 217 aa13.52□□□□□ -0.25
CTTN-208ENST00000498223 AKR1B1P15121 316 aa13.52□□□□□ -0.25
CTTN-208ENST00000498223 HSPA4P34932 840 aa13.52□□□□□ -0.25
CTTN-208ENST00000498223 TFAP4Q01664 338 aa13.52□□□□□ -0.25
CTTN-208ENST00000498223 VGLL4Q14135 290 aa13.52□□□□□ -0.25
CTTN-208ENST00000498223 KRT32Q14532 448 aa13.52□□□□□ -0.25
CTTN-208ENST00000498223 RGMBQ6NW40 437 aa13.52□□□□□ -0.25
CTTN-208ENST00000498223 SCYL3Q8IZE3 742 aa13.52□□□□□ -0.25
CTTN-208ENST00000498223 NBPF3Q9H094 633 aa13.52□□□□□ -0.25
CTTN-208ENST00000498223 ZNF112Q9UJU3 913 aa13.52□□□□□ -0.25
CTTN-208ENST00000498223 PTPRFP10586 1907 aa13.51□□□□□ -0.25
CTTN-208ENST00000498223 GREB1LQ9C091 1923 aaPredicted RBP13.51□□□□□ -0.25
CTTN-208ENST00000498223 ORC4O43929 436 aa13.51□□□□□ -0.25
CTTN-208ENST00000498223 KDM4AO75164 1064 aa13.51□□□□□ -0.25
CTTN-208ENST00000498223 ASNSP08243 561 aa13.51□□□□□ -0.25
CTTN-208ENST00000498223 ATP2B2Q01814 1243 aa13.51□□□□□ -0.25
CTTN-208ENST00000498223 RRP1BQ14684 758 aaKnown RBP13.51□□□□□ -0.25
CTTN-208ENST00000498223 MAP3K11Q16584 847 aa13.51□□□□□ -0.25
CTTN-208ENST00000498223 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.51□□□□□ -0.25
CTTN-208ENST00000498223 TMEM179Q6ZVK1 233 aa13.51□□□□□ -0.25
CTTN-208ENST00000498223 CLMNQ96JQ2 1002 aa13.51□□□□□ -0.25
CTTN-208ENST00000498223 JAKMIP1Q96N16 626 aaKnown RBP13.51□□□□□ -0.25
CTTN-208ENST00000498223 ZBTB21Q9ULJ3 1066 aa13.51□□□□□ -0.25
CTTN-208ENST00000498223 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.51□□□□□ -0.25
CTTN-208ENST00000498223 SNX14Q9Y5W7 946 aa13.51□□□□□ -0.25
CTTN-208ENST00000498223 TACC3Q9Y6A5 838 aa13.51□□□□□ -0.25
CTTN-208ENST00000498223 TAF6LQ9Y6J9 622 aa13.51□□□□□ -0.25
CTTN-208ENST00000498223 PSMA5P28066 241 aa13.5□□□□□ -0.25
CTTN-208ENST00000498223 ZNF157P51786 506 aaPredicted RBP13.5□□□□□ -0.25
CTTN-208ENST00000498223 SEPT2Q15019 361 aa13.5□□□□□ -0.25
CTTN-208ENST00000498223 SHROOM1Q2M3G4 852 aaPredicted RBP13.5□□□□□ -0.25
CTTN-208ENST00000498223 NOL9Q5SY16 702 aaKnown RBP13.5□□□□□ -0.25
CTTN-208ENST00000498223 LDLRAD1Q5T700 205 aa13.5□□□□□ -0.25
CTTN-208ENST00000498223 STOX1Q6ZVD7 989 aa13.5□□□□□ -0.25
CTTN-208ENST00000498223 IQCA1Q86XH1 822 aa13.5□□□□□ -0.25
CTTN-208ENST00000498223 RASEFQ8IZ41 740 aa13.5□□□□□ -0.25
CTTN-208ENST00000498223 CCDC102AQ96A19 550 aa13.5□□□□□ -0.25
CTTN-208ENST00000498223 NEK1Q96PY6 1258 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms