RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 ADCY3O60266 1144 aa27.47■■□□□ 1.99
CDKN2A-208ENST00000498124 GJB1P08034 283 aa27.47■■□□□ 1.99
CDKN2A-208ENST00000498124 ELNP15502 786 aa27.47■■□□□ 1.99
CDKN2A-208ENST00000498124 GJA8P48165 433 aa27.47■■□□□ 1.99
CDKN2A-208ENST00000498124 BACE1P56817 501 aa27.47■■□□□ 1.99
CDKN2A-208ENST00000498124 UBE2Q1Q7Z7E8 422 aa27.47■■□□□ 1.99
CDKN2A-208ENST00000498124 GCLCP48506 637 aaPredicted RBP27.46■■□□□ 1.99
CDKN2A-208ENST00000498124 PABPC4Q13310 644 aaKnown RBP eCLIP27.46■■□□□ 1.99
CDKN2A-208ENST00000498124 RIOK1Q9BRS2 568 aaKnown RBP27.46■■□□□ 1.99
CDKN2A-208ENST00000498124 UNC93B1Q9H1C4 597 aa27.46■■□□□ 1.99
CDKN2A-208ENST00000498124 HLA-DOAP06340 250 aa27.45■■□□□ 1.98
CDKN2A-208ENST00000498124 UBXN2AP68543 259 aa27.45■■□□□ 1.98
CDKN2A-208ENST00000498124 MAP3K12Q12852 859 aa27.45■■□□□ 1.98
CDKN2A-208ENST00000498124 HSP90AB4PQ58FF6 505 aa27.45■■□□□ 1.98
CDKN2A-208ENST00000498124 PXYLP1Q8TE99 480 aa27.45■■□□□ 1.98
CDKN2A-208ENST00000498124 GCC1Q96CN9 775 aa27.45■■□□□ 1.98
CDKN2A-208ENST00000498124 RNF208Q9H0X6 261 aa27.45■■□□□ 1.98
CDKN2A-208ENST00000498124 GINM1Q9NU53 330 aa27.45■■□□□ 1.98
CDKN2A-208ENST00000498124 BIN2Q9UBW5 565 aaPredicted RBP27.45■■□□□ 1.98
CDKN2A-208ENST00000498124 PLXNB2O15031 1838 aa27.44■■□□□ 1.98
CDKN2A-208ENST00000498124 INHAP05111 366 aa27.44■■□□□ 1.98
CDKN2A-208ENST00000498124 TMED8Q6PL24 325 aaPredicted RBP27.44■■□□□ 1.98
CDKN2A-208ENST00000498124 CERS3Q8IU89 383 aa27.44■■□□□ 1.98
CDKN2A-208ENST00000498124 RPAP2Q8IXW5 612 aaPredicted RBP27.44■■□□□ 1.98
CDKN2A-208ENST00000498124 TRIM34Q9BYJ4 488 aa27.44■■□□□ 1.98
CDKN2A-208ENST00000498124 SUPT16HQ9Y5B9 1047 aaKnown RBP27.44■■□□□ 1.98
CDKN2A-208ENST00000498124 NAV1Q8NEY1 1877 aa27.44■■□□□ 1.98
CDKN2A-208ENST00000498124 HOXA7P31268 230 aaPredicted RBP27.43■■□□□ 1.98
CDKN2A-208ENST00000498124 NKX2-3Q8TAU0 364 aa27.43■■□□□ 1.98
CDKN2A-208ENST00000498124 MORF4L1Q9UBU8 362 aa27.43■■□□□ 1.98
CDKN2A-208ENST00000498124 USP5P45974 858 aa27.42■■□□□ 1.98
CDKN2A-208ENST00000498124 TATDN1Q6P1N9 297 aa27.42■■□□□ 1.98
CDKN2A-208ENST00000498124 COA7Q96BR5 231 aa27.42■■□□□ 1.98
CDKN2A-208ENST00000498124 KIF1BPQ96EK5 621 aa27.42■■□□□ 1.98
CDKN2A-208ENST00000498124 EHD4Q9H223 541 aa27.42■■□□□ 1.98
CDKN2A-208ENST00000498124 USP17L10C9JJH3 530 aa27.41■■□□□ 1.98
CDKN2A-208ENST00000498124 APBB1O00213 710 aa27.41■■□□□ 1.98
CDKN2A-208ENST00000498124 PEX10O60683 326 aa27.41■■□□□ 1.98
CDKN2A-208ENST00000498124 PDE6AP16499 860 aa27.41■■□□□ 1.98
CDKN2A-208ENST00000498124 HABP4Q5JVS0 413 aaKnown RBP27.41■■□□□ 1.98
CDKN2A-208ENST00000498124 U2AF1L4Q8WU68 220 aaKnown RBP27.41■■□□□ 1.98
CDKN2A-208ENST00000498124 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.41■■□□□ 1.98
CDKN2A-208ENST00000498124 TMOD4Q9NZQ9 345 aa27.41■■□□□ 1.98
CDKN2A-208ENST00000498124 RANBP2P49792 3224 aaKnown RBP27.4■■□□□ 1.98
CDKN2A-208ENST00000498124 C19orf81C9J6K1 198 aa27.4■■□□□ 1.98
CDKN2A-208ENST00000498124 GH2P01242 217 aa27.4■■□□□ 1.98
CDKN2A-208ENST00000498124 CLASRPQ8N2M8 674 aaKnown RBP27.4■■□□□ 1.98
CDKN2A-208ENST00000498124 P2RX7Q99572 595 aaKnown RBP27.4■■□□□ 1.98
CDKN2A-208ENST00000498124 TXNRD2Q9NNW7 524 aa27.4■■□□□ 1.98
CDKN2A-208ENST00000498124 SERPINB13Q9UIV8 391 aa27.4■■□□□ 1.98
CDKN2A-208ENST00000498124 GJD2Q9UKL4 321 aa27.4■■□□□ 1.98
CDKN2A-208ENST00000498124 HMMRO75330 724 aa27.39■■□□□ 1.98
CDKN2A-208ENST00000498124 IRX3P78415 501 aaPredicted RBP27.39■■□□□ 1.98
CDKN2A-208ENST00000498124 POTEEQ6S8J3 1075 aa27.39■■□□□ 1.98
CDKN2A-208ENST00000498124 EMILIN3Q9NT22 766 aa27.39■■□□□ 1.98
CDKN2A-208ENST00000498124 TCRBV5S4A2TA0A5A2 114 aa27.38■■□□□ 1.97
CDKN2A-208ENST00000498124 PLCD1P51178 756 aa27.38■■□□□ 1.97
CDKN2A-208ENST00000498124 HERVK_113P62684 666 aa27.38■■□□□ 1.97
CDKN2A-208ENST00000498124 TTF1Q15361 905 aaPredicted RBP27.38■■□□□ 1.97
CDKN2A-208ENST00000498124 PAK6Q9NQU5 681 aaPredicted RBP27.38■■□□□ 1.97
CDKN2A-208ENST00000498124 TAOK2Q9UL54 1235 aa27.38■■□□□ 1.97
CDKN2A-208ENST00000498124 MAGEB6P1A0A0J9YX57 407 aa27.37■■□□□ 1.97
CDKN2A-208ENST00000498124 H0YGN5 161 aa27.37■■□□□ 1.97
CDKN2A-208ENST00000498124 GOLIM4O00461 696 aa27.37■■□□□ 1.97
CDKN2A-208ENST00000498124 SGPL1O95470 568 aa27.37■■□□□ 1.97
CDKN2A-208ENST00000498124 SHMT1P34896 483 aa27.37■■□□□ 1.97
CDKN2A-208ENST00000498124 EVX2Q03828 476 aa27.37■■□□□ 1.97
CDKN2A-208ENST00000498124 SLC9C2Q5TAH2 1124 aa27.37■■□□□ 1.97
CDKN2A-208ENST00000498124 EDC3Q96F86 508 aaKnown RBP27.37■■□□□ 1.97
CDKN2A-208ENST00000498124 C12orf42Q96LP6 360 aa27.36■■□□□ 1.97
CDKN2A-208ENST00000498124 DNAJC2Q99543 621 aaKnown RBP27.36■■□□□ 1.97
CDKN2A-208ENST00000498124 ZNF532Q9HCE3 1301 aa27.36■■□□□ 1.97
CDKN2A-208ENST00000498124 RAB11FIP3O75154 756 aa27.35■■□□□ 1.97
CDKN2A-208ENST00000498124 IFIT2P09913 472 aaKnown RBP27.35■■□□□ 1.97
CDKN2A-208ENST00000498124 GABPAQ06546 454 aa27.35■■□□□ 1.97
CDKN2A-208ENST00000498124 USP17L2Q6R6M4 530 aa27.35■■□□□ 1.97
CDKN2A-208ENST00000498124 TTC6Q86TZ1 520 aa27.35■■□□□ 1.97
CDKN2A-208ENST00000498124 RBPJLQ9UBG7 517 aa27.35■■□□□ 1.97
CDKN2A-208ENST00000498124 FARP2O94887 1054 aaPredicted RBP27.34■■□□□ 1.97
CDKN2A-208ENST00000498124 DEFB118Q96PH6 123 aa27.34■■□□□ 1.97
CDKN2A-208ENST00000498124 CRBNQ96SW2 442 aa27.34■■□□□ 1.97
CDKN2A-208ENST00000498124 GUCY1A2P33402 732 aa27.33■■□□□ 1.97
CDKN2A-208ENST00000498124 TRIM32Q13049 653 aa27.33■■□□□ 1.97
CDKN2A-208ENST00000498124 CERKLQ49MI3 558 aaPredicted RBP27.33■■□□□ 1.97
CDKN2A-208ENST00000498124 LCORLQ8N3X6 602 aa27.33■■□□□ 1.97
CDKN2A-208ENST00000498124 CRISPLD2Q9H0B8 497 aa27.33■■□□□ 1.97
CDKN2A-208ENST00000498124 COLQQ9Y215 455 aaPredicted RBP27.33■■□□□ 1.97
CDKN2A-208ENST00000498124 HMGCRP04035 888 aa27.32■■□□□ 1.96
CDKN2A-208ENST00000498124 ABCB5Q2M3G0 1257 aa27.32■■□□□ 1.96
CDKN2A-208ENST00000498124 SLFNL1Q499Z3 407 aa27.32■■□□□ 1.96
CDKN2A-208ENST00000498124 GPRC5AQ8NFJ5 357 aa27.32■■□□□ 1.96
CDKN2A-208ENST00000498124 ACER1Q8TDN7 264 aa27.32■■□□□ 1.96
CDKN2A-208ENST00000498124 CRNKL1Q9BZJ0 848 aaKnown RBP27.32■■□□□ 1.96
CDKN2A-208ENST00000498124 CENPBP07199 599 aaPredicted RBP27.31■■□□□ 1.96
CDKN2A-208ENST00000498124 ERVK-9P63128 1117 aa27.31■■□□□ 1.96
CDKN2A-208ENST00000498124 ERVK-24P63145 666 aa27.31■■□□□ 1.96
CDKN2A-208ENST00000498124 RAB3GAP1Q15042 981 aa27.31■■□□□ 1.96
CDKN2A-208ENST00000498124 ZYXQ15942 572 aaKnown RBP27.31■■□□□ 1.96
CDKN2A-208ENST00000498124 Q3C1V9 767 aa27.31■■□□□ 1.96
CDKN2A-208ENST00000498124 SDR42E1Q8WUS8 393 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms