RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 ZFYVE27Q5T4F4 411 aa9.15□□□□□ -0.95
HLA-DMB-262ENST00000498020 APOA5Q6Q788 366 aa9.15□□□□□ -0.95
HLA-DMB-262ENST00000498020 ILDR2Q71H61 639 aa9.15□□□□□ -0.95
HLA-DMB-262ENST00000498020 TEX11Q8IYF3 940 aa9.15□□□□□ -0.95
HLA-DMB-262ENST00000498020 TTC12Q9H892 705 aaPredicted RBP9.15□□□□□ -0.95
HLA-DMB-262ENST00000498020 ZNF500O60304 480 aaPredicted RBP9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 DEXIO95424 95 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 BMP15O95972 392 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 RDXP35241 583 aaKnown RBP9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 MAP3K9P80192 1104 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 FNBP4Q8N3X1 1017 aaPredicted RBP9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 TRPM3Q9HCF6 1732 aaPredicted RBP9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 SAP30BPQ9UHR5 308 aaKnown RBP9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 A0A1B0GVL5 298 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 SH2B2O14492 632 aaPredicted RBP9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 SERPINC1P01008 464 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 NPR1P16066 1061 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 ZNF157P51786 506 aaPredicted RBP9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 MCM9Q9NXL9 1143 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 RGPD2P0DJD1 1756 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 A0A1W2PQ27 194 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 A0A1W2PQ64 194 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 A0A1W2PQD8 194 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 SEMA3EO15041 775 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 CAMTA2O94983 1202 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 LIFRP42702 1097 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 GYG1P46976 350 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 PPARAQ07869 468 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 NOLC1Q14978 699 aaKnown RBP eCLIP9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 CCDC178Q5BJE1 867 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 FAM47CQ5HY64 1035 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 BARGINQ6ZT62 677 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 ZNF830Q96NB3 372 aaPredicted RBP9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 ZKSCAN3Q9BRR0 538 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 GINS2Q9Y248 185 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 TNS2Q63HR2 1409 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 ST3GAL1Q11201 340 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 SUPT20HL1Q3ZLR7 823 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 PDILTQ8N807 584 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 PHKBQ93100 1093 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 MAP7D2Q96T17 732 aa9.14□□□□□ -0.95
HLA-DMB-262ENST00000498020 UQCRHLA0A096LP55 91 aa9.13□□□□□ -0.95
HLA-DMB-262ENST00000498020 SSBP05455 408 aaKnown RBP eCLIP9.13□□□□□ -0.95
HLA-DMB-262ENST00000498020 UQCRHP07919 91 aa9.13□□□□□ -0.95
HLA-DMB-262ENST00000498020 RILPL1Q5EBL4 403 aa9.13□□□□□ -0.95
HLA-DMB-262ENST00000498020 KANK3Q6NY19 840 aa9.13□□□□□ -0.95
HLA-DMB-262ENST00000498020 CCDC186Q7Z3E2 898 aa9.13□□□□□ -0.95
HLA-DMB-262ENST00000498020 MTERF4Q7Z6M4 381 aaKnown RBP9.13□□□□□ -0.95
HLA-DMB-262ENST00000498020 GPR101Q96P66 508 aaPredicted RBP9.13□□□□□ -0.95
HLA-DMB-262ENST00000498020 MPHOSPH6Q99547 160 aaKnown RBP9.13□□□□□ -0.95
HLA-DMB-262ENST00000498020 RBM28Q9NW13 759 aaKnown RBP9.13□□□□□ -0.95
HLA-DMB-262ENST00000498020 BIN1O00499 593 aa9.13□□□□□ -0.95
HLA-DMB-262ENST00000498020 MYL10Q9BUA6 226 aa9.13□□□□□ -0.95
HLA-DMB-262ENST00000498020 POLR3EQ9NVU0 708 aa9.13□□□□□ -0.95
HLA-DMB-262ENST00000498020 BSDC1Q9NW68 430 aaPredicted RBP9.13□□□□□ -0.95
HLA-DMB-262ENST00000498020 STRCP1A6NGW2 1772 aa9.13□□□□□ -0.95
HLA-DMB-262ENST00000498020 ALS2Q96Q42 1657 aa9.13□□□□□ -0.95
HLA-DMB-262ENST00000498020 ROBO1Q9Y6N7 1651 aa9.13□□□□□ -0.95
HLA-DMB-262ENST00000498020 GSDMDP57764 484 aa9.13□□□□□ -0.95
HLA-DMB-262ENST00000498020 AGXT2Q9BYV1 514 aa9.13□□□□□ -0.95
HLA-DMB-262ENST00000498020 PCDHA7Q9UN72 937 aa9.13□□□□□ -0.95
HLA-DMB-262ENST00000498020 PCP11498 1178 aaKnown RBP9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 NLRP5P59047 1200 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 KAT14Q9H8E8 782 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 MRVI1Q9Y6F6 885 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 UBN2Q6ZU65 1347 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 KRT18P05783 430 aaKnown RBP9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 MATR3P43243 847 aaKnown RBP eCLIP9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 AOC3Q16853 763 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 INTS5Q6P9B9 1019 aaKnown RBP9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 DIS3L2Q8IYB7 885 aaKnown RBP9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 WDR66Q8TBY9 1149 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 PGBD1Q96JS3 809 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 SAMM50Q9Y512 469 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 SNAP23O00161 211 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 CUTAO60888 179 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 GNAQP50148 359 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 NFIXQ14938 502 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 DCAF15Q66K64 600 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 TBC1D10CQ8IV04 446 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 ZNF654Q8IZM8 581 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 AOPEPQ8N6M6 819 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 SMARCE1Q969G3 411 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 SLC4A9Q96Q91 983 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 MTA3Q9BTC8 594 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.12□□□□□ -0.952e-6■■■■■ 96.1
HLA-DMB-262ENST00000498020 PTPRZ1P23471 2315 aaPredicted RBP9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 TRIM75PA6NK02 468 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 CCP110O43303 1012 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 ZNF202O95125 648 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 CC2D2BQ6DHV5 1058 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 ZNF771Q7L3S4 317 aaPredicted RBP9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 LCORLQ8N3X6 602 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 LINC00301Q8NCQ3 95 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 TEKT1Q969V4 418 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 MAGEC2Q9UBF1 373 aaPredicted RBP9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 SEC63Q9UGP8 760 aaKnown RBP9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 HACL1Q9UJ83 578 aa9.12□□□□□ -0.95
HLA-DMB-262ENST00000498020 BBOX1O75936 387 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms