RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 WDR18Q9BV38 432 aa14.32□□□□□ -0.12
NUDCD3-211ENST00000497978 TMOD4Q9NZQ9 345 aa14.32□□□□□ -0.12
NUDCD3-211ENST00000497978 SAP30BPQ9UHR5 308 aaKnown RBP14.32□□□□□ -0.12
NUDCD3-211ENST00000497978 DDX19BQ9UMR2 479 aa14.32□□□□□ -0.12
NUDCD3-211ENST00000497978 FOCADQ5VW36 1801 aa14.31□□□□□ -0.12
NUDCD3-211ENST00000497978 CDK5RAP2Q96SN8 1893 aa14.31□□□□□ -0.12
NUDCD3-211ENST00000497978 ADCY3O60266 1144 aa14.31□□□□□ -0.12
NUDCD3-211ENST00000497978 CCL5P13501 91 aa14.31□□□□□ -0.12
NUDCD3-211ENST00000497978 FLT3LGP49771 235 aa14.31□□□□□ -0.12
NUDCD3-211ENST00000497978 TTF1Q15361 905 aaPredicted RBP14.31□□□□□ -0.12
NUDCD3-211ENST00000497978 FAM110CQ1W6H9 321 aa14.31□□□□□ -0.12
NUDCD3-211ENST00000497978 SH3D19Q5HYK7 790 aa14.31□□□□□ -0.12
NUDCD3-211ENST00000497978 METTL16Q86W50 562 aaKnown RBP14.31□□□□□ -0.12
NUDCD3-211ENST00000497978 CLASRPQ8N2M8 674 aaKnown RBP14.31□□□□□ -0.12
NUDCD3-211ENST00000497978 MIGA1Q8NAN2 632 aa14.31□□□□□ -0.12
NUDCD3-211ENST00000497978 RHPN1Q8TCX5 695 aa14.31□□□□□ -0.12
NUDCD3-211ENST00000497978 RNF208Q9H0X6 261 aa14.31□□□□□ -0.12
NUDCD3-211ENST00000497978 GABRQQ9UN88 632 aa14.31□□□□□ -0.12
NUDCD3-211ENST00000497978 LOC285556D6RIA3 1793 aa14.31□□□□□ -0.12
NUDCD3-211ENST00000497978 C19orf81C9J6K1 198 aa14.3□□□□□ -0.12
NUDCD3-211ENST00000497978 BACE1P56817 501 aa14.3□□□□□ -0.12
NUDCD3-211ENST00000497978 MTMR2Q13614 643 aa14.3□□□□□ -0.12
NUDCD3-211ENST00000497978 PXYLP1Q8TE99 480 aa14.3□□□□□ -0.12
NUDCD3-211ENST00000497978 KIF1BPQ96EK5 621 aa14.3□□□□□ -0.12
NUDCD3-211ENST00000497978 ASCC2Q9H1I8 757 aaPredicted RBP14.3□□□□□ -0.12
NUDCD3-211ENST00000497978 DNAJC18Q9H819 358 aa14.3□□□□□ -0.12
NUDCD3-211ENST00000497978 IL1RAPL2Q9NP60 686 aa14.3□□□□□ -0.12
NUDCD3-211ENST00000497978 NDUFB9Q9Y6M9 179 aa14.3□□□□□ -0.12
NUDCD3-211ENST00000497978 SIPA1L1O43166 1804 aa14.29□□□□□ -0.12
NUDCD3-211ENST00000497978 APBB1O00213 710 aa14.29□□□□□ -0.12
NUDCD3-211ENST00000497978 GDF11O95390 407 aa14.29□□□□□ -0.12
NUDCD3-211ENST00000497978 GJB1P08034 283 aa14.29□□□□□ -0.12
NUDCD3-211ENST00000497978 IFIT2P09913 472 aaKnown RBP14.29□□□□□ -0.12
NUDCD3-211ENST00000497978 GJA8P48165 433 aa14.29□□□□□ -0.12
NUDCD3-211ENST00000497978 IRX3P78415 501 aaPredicted RBP14.29□□□□□ -0.12
NUDCD3-211ENST00000497978 IRF5Q13568 498 aa14.29□□□□□ -0.12
NUDCD3-211ENST00000497978 ANTXR1Q9H6X2 564 aa14.29□□□□□ -0.12
NUDCD3-211ENST00000497978 TAOK2Q9UL54 1235 aa14.29□□□□□ -0.12
NUDCD3-211ENST00000497978 ZBTB21Q9ULJ3 1066 aa14.29□□□□□ -0.12
NUDCD3-211ENST00000497978 COG6Q9Y2V7 657 aa14.29□□□□□ -0.12
NUDCD3-211ENST00000497978 USP17L10C9JJH3 530 aa14.28□□□□□ -0.12
NUDCD3-211ENST00000497978 RAB11FIP3O75154 756 aa14.28□□□□□ -0.12
NUDCD3-211ENST00000497978 MYH1P12882 1939 aa14.28□□□□□ -0.12
NUDCD3-211ENST00000497978 TTC6Q86TZ1 520 aa14.28□□□□□ -0.12
NUDCD3-211ENST00000497978 ZBTB40Q9NUA8 1239 aa14.28□□□□□ -0.12
NUDCD3-211ENST00000497978 SERPINB13Q9UIV8 391 aa14.28□□□□□ -0.12
NUDCD3-211ENST00000497978 RCAN3Q9UKA8 241 aa14.28□□□□□ -0.12
NUDCD3-211ENST00000497978 CENPFP49454 3210 aa14.27□□□□□ -0.12
NUDCD3-211ENST00000497978 MAGEB6P1A0A0J9YX57 407 aa14.27□□□□□ -0.13
NUDCD3-211ENST00000497978 INHAP05111 366 aa14.27□□□□□ -0.13
NUDCD3-211ENST00000497978 ELNP15502 786 aa14.27□□□□□ -0.13
NUDCD3-211ENST00000497978 CAPN2P17655 700 aa14.27□□□□□ -0.13
NUDCD3-211ENST00000497978 HOXA7P31268 230 aaPredicted RBP14.27□□□□□ -0.13
NUDCD3-211ENST00000497978 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.27□□□□□ -0.13
NUDCD3-211ENST00000497978 SHISA4Q96DD7 197 aa14.27□□□□□ -0.13
NUDCD3-211ENST00000497978 BCL11AQ9H165 835 aa14.27□□□□□ -0.13
NUDCD3-211ENST00000497978 UNC93B1Q9H1C4 597 aa14.27□□□□□ -0.13
NUDCD3-211ENST00000497978 EHD4Q9H223 541 aa14.27□□□□□ -0.13
NUDCD3-211ENST00000497978 GH2P01242 217 aa14.26□□□□□ -0.13
NUDCD3-211ENST00000497978 JAG1P78504 1218 aa14.26□□□□□ -0.13
NUDCD3-211ENST00000497978 SLC9C2Q5TAH2 1124 aa14.26□□□□□ -0.13
NUDCD3-211ENST00000497978 TATDN1Q6P1N9 297 aa14.26□□□□□ -0.13
NUDCD3-211ENST00000497978 USP17L2Q6R6M4 530 aa14.26□□□□□ -0.13
NUDCD3-211ENST00000497978 U2AF1L4Q8WU68 220 aaKnown RBP14.26□□□□□ -0.13
NUDCD3-211ENST00000497978 DNAJC2Q99543 621 aaKnown RBP14.26□□□□□ -0.13
NUDCD3-211ENST00000497978 HTATIP2Q9BUP3 242 aa14.26□□□□□ -0.13
NUDCD3-211ENST00000497978 CRNKL1Q9BZJ0 848 aaKnown RBP14.26□□□□□ -0.13
NUDCD3-211ENST00000497978 MORF4L1Q9UBU8 362 aa14.26□□□□□ -0.13
NUDCD3-211ENST00000497978 GOLIM4O00461 696 aa14.25□□□□□ -0.13
NUDCD3-211ENST00000497978 SGPL1O95470 568 aa14.25□□□□□ -0.13
NUDCD3-211ENST00000497978 POLR3DP05423 398 aaPredicted RBP14.25□□□□□ -0.13
NUDCD3-211ENST00000497978 PDE6AP16499 860 aa14.25□□□□□ -0.13
NUDCD3-211ENST00000497978 SHROOM1Q2M3G4 852 aaPredicted RBP14.25□□□□□ -0.13
NUDCD3-211ENST00000497978 CERKLQ49MI3 558 aaPredicted RBP14.25□□□□□ -0.13
NUDCD3-211ENST00000497978 HABP4Q5JVS0 413 aaKnown RBP14.25□□□□□ -0.13
NUDCD3-211ENST00000497978 GPRC5AQ8NFJ5 357 aa14.25□□□□□ -0.13
NUDCD3-211ENST00000497978 GTF3C2Q8WUA4 911 aaPredicted RBP14.25□□□□□ -0.13
NUDCD3-211ENST00000497978 DPF3Q92784 378 aa14.25□□□□□ -0.13
NUDCD3-211ENST00000497978 P2RX7Q99572 595 aaKnown RBP14.25□□□□□ -0.13
NUDCD3-211ENST00000497978 FEZ1Q99689 392 aa14.25□□□□□ -0.13
NUDCD3-211ENST00000497978 RIOK1Q9BRS2 568 aaKnown RBP14.25□□□□□ -0.13
NUDCD3-211ENST00000497978 CABP5Q9NP86 173 aa14.25□□□□□ -0.13
NUDCD3-211ENST00000497978 DOCK3Q8IZD9 2030 aa14.24□□□□□ -0.13
NUDCD3-211ENST00000497978 TFRCP02786 760 aaKnown RBP14.24□□□□□ -0.13
NUDCD3-211ENST00000497978 USP14P54578 494 aa14.24□□□□□ -0.13
NUDCD3-211ENST00000497978 HERVK_113P62684 666 aa14.24□□□□□ -0.13
NUDCD3-211ENST00000497978 RAB3GAP1Q15042 981 aa14.24□□□□□ -0.13
NUDCD3-211ENST00000497978 ABCB5Q2M3G0 1257 aa14.24□□□□□ -0.13
NUDCD3-211ENST00000497978 CCAR1Q8IX12 1150 aaKnown RBP14.24□□□□□ -0.13
NUDCD3-211ENST00000497978 SIRT2Q8IXJ6 389 aa14.24□□□□□ -0.13
NUDCD3-211ENST00000497978 PCDH10Q9P2E7 1040 aa14.24□□□□□ -0.13
NUDCD3-211ENST00000497978 ZNF532Q9HCE3 1301 aa14.23□□□□□ -0.13
NUDCD3-211ENST00000497978 FARP2O94887 1054 aaPredicted RBP14.23□□□□□ -0.13
NUDCD3-211ENST00000497978 HMGCRP04035 888 aa14.23□□□□□ -0.13
NUDCD3-211ENST00000497978 PDE3AQ14432 1141 aa14.23□□□□□ -0.13
NUDCD3-211ENST00000497978 DEFB118Q96PH6 123 aa14.23□□□□□ -0.13
NUDCD3-211ENST00000497978 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.23□□□□□ -0.13
NUDCD3-211ENST00000497978 EMILIN3Q9NT22 766 aa14.23□□□□□ -0.13
NUDCD3-211ENST00000497978 MCM9Q9NXL9 1143 aa14.23□□□□□ -0.13
NUDCD3-211ENST00000497978 GJD2Q9UKL4 321 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms