RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 RUNDC1Q96C34 613 aa7.66□□□□□ -1.18
BRCA1-224ENST00000497488 TIFAQ96CG3 184 aa7.66□□□□□ -1.18
BRCA1-224ENST00000497488 IPO9Q96P70 1041 aaKnown RBP7.66□□□□□ -1.18
BRCA1-224ENST00000497488 FBRSQ9HAH7 460 aa7.66□□□□□ -1.18
BRCA1-224ENST00000497488 PRDM11Q9NQV5 511 aa7.66□□□□□ -1.18
BRCA1-224ENST00000497488 NRBP1Q9UHY1 535 aa7.66□□□□□ -1.18
BRCA1-224ENST00000497488 DACH1Q9UI36 760 aa7.66□□□□□ -1.18
BRCA1-224ENST00000497488 TNKSO95271 1327 aa7.66□□□□□ -1.18
BRCA1-224ENST00000497488 TRAV20A0A0B4J274 112 aa7.65□□□□□ -1.18
BRCA1-224ENST00000497488 AGRPO00253 132 aa7.65□□□□□ -1.18
BRCA1-224ENST00000497488 NME2P22392 152 aa7.65□□□□□ -1.18
BRCA1-224ENST00000497488 SLC19A1P41440 591 aa7.65□□□□□ -1.18
BRCA1-224ENST00000497488 NNTQ13423 1086 aa7.65□□□□□ -1.18
BRCA1-224ENST00000497488 PCBP1Q15365 356 aaKnown RBP eCLIP7.65□□□□□ -1.18
BRCA1-224ENST00000497488 COL13A1Q5TAT6 717 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-224ENST00000497488 LLGL2Q6P1M3 1020 aa7.65□□□□□ -1.18
BRCA1-224ENST00000497488 MORC1Q86VD1 984 aa7.65□□□□□ -1.18
BRCA1-224ENST00000497488 KLHL6Q8WZ60 621 aa7.65□□□□□ -1.18
BRCA1-224ENST00000497488 PAGR1Q9BTK6 254 aa7.65□□□□□ -1.18
BRCA1-224ENST00000497488 ZHX3Q9H4I2 956 aa7.65□□□□□ -1.18
BRCA1-224ENST00000497488 BRD7Q9NPI1 651 aa7.65□□□□□ -1.18
BRCA1-224ENST00000497488 LUC7LQ9NQ29 371 aaKnown RBP7.65□□□□□ -1.18
BRCA1-224ENST00000497488 PCDHB10Q9UN67 800 aa7.65□□□□□ -1.18
BRCA1-224ENST00000497488 A0A1W2PQU0 124 aa7.64□□□□□ -1.19
BRCA1-224ENST00000497488 CD2BP2O95400 341 aaKnown RBP7.64□□□□□ -1.19
BRCA1-224ENST00000497488 U2AF1L5P0DN76 240 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-224ENST00000497488 ACRP10323 421 aa7.64□□□□□ -1.19
BRCA1-224ENST00000497488 TARSP26639 723 aaKnown RBP7.64□□□□□ -1.19
BRCA1-224ENST00000497488 ZNF157P51786 506 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-224ENST00000497488 U2AF1Q01081 240 aaKnown RBP eCLIP7.64□□□□□ -1.19
BRCA1-224ENST00000497488 YOD1Q5VVQ6 348 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-224ENST00000497488 KRT25Q7Z3Z0 450 aa7.64□□□□□ -1.19
BRCA1-224ENST00000497488 SCUBE1Q8IWY4 988 aa7.64□□□□□ -1.19
BRCA1-224ENST00000497488 CEP120Q8N960 986 aa7.64□□□□□ -1.19
BRCA1-224ENST00000497488 COG1Q8WTW3 980 aa7.64□□□□□ -1.19
BRCA1-224ENST00000497488 NXPE3Q969Y0 559 aa7.64□□□□□ -1.19
BRCA1-224ENST00000497488 ITPKCQ96DU7 683 aa7.64□□□□□ -1.19
BRCA1-224ENST00000497488 HHIPQ96QV1 700 aa7.64□□□□□ -1.19
BRCA1-224ENST00000497488 STRBPQ96SI9 672 aaKnown RBP7.64□□□□□ -1.19
BRCA1-224ENST00000497488 INO80BQ9C086 356 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-224ENST00000497488 ZNF69Q9UC07 566 aa7.64□□□□□ -1.19
BRCA1-224ENST00000497488 IP6K2Q9UHH9 426 aa7.64□□□□□ -1.19
BRCA1-224ENST00000497488 PPP2R3BQ9Y5P8 575 aa7.64□□□□□ -1.19
BRCA1-224ENST00000497488 PRR36Q9H6K5 1346 aa7.63□□□□□ -1.19
BRCA1-224ENST00000497488 A0A1W2PNR3 127 aa7.63□□□□□ -1.19
BRCA1-224ENST00000497488 ANO9A1A5B4 782 aa7.63□□□□□ -1.19
BRCA1-224ENST00000497488 ZNF500O60304 480 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-224ENST00000497488 FBXO21O94952 628 aa7.63□□□□□ -1.19
BRCA1-224ENST00000497488 MYL3P08590 195 aa7.63□□□□□ -1.19
BRCA1-224ENST00000497488 LIG1P18858 919 aa7.63□□□□□ -1.19
BRCA1-224ENST00000497488 TMPRSS15P98073 1019 aa7.63□□□□□ -1.19
BRCA1-224ENST00000497488 HYAL2Q12891 473 aa7.63□□□□□ -1.19
BRCA1-224ENST00000497488 SEPT7Q16181 437 aaKnown RBP7.63□□□□□ -1.19
BRCA1-224ENST00000497488 SPRYD7Q5W111 196 aa7.63□□□□□ -1.19
BRCA1-224ENST00000497488 INTS3Q68E01 1043 aaKnown RBP7.63□□□□□ -1.19
BRCA1-224ENST00000497488 TPH2Q8IWU9 490 aa7.63□□□□□ -1.19
BRCA1-224ENST00000497488 ENAHQ8N8S7 591 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-224ENST00000497488 TMEM102Q8N9M5 508 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-224ENST00000497488 TEX19Q8NA77 164 aa7.63□□□□□ -1.19
BRCA1-224ENST00000497488 GRIN3AQ8TCU5 1115 aa7.63□□□□□ -1.19
BRCA1-224ENST00000497488 USP33Q8TEY7 942 aa7.63□□□□□ -1.19
BRCA1-224ENST00000497488 TRIM39Q9HCM9 518 aa7.63□□□□□ -1.19
BRCA1-224ENST00000497488 PUF60Q9UHX1 559 aaKnown RBP7.63□□□□□ -1.19
BRCA1-224ENST00000497488 RASSF10A6NK89 507 aa7.62□□□□□ -1.19
BRCA1-224ENST00000497488 CCER2I3L3R5 266 aa7.62□□□□□ -1.19
BRCA1-224ENST00000497488 NFKBIEO00221 500 aa7.62□□□□□ -1.19
BRCA1-224ENST00000497488 HTR3BO95264 441 aa7.62□□□□□ -1.19
BRCA1-224ENST00000497488 SOX18P35713 384 aa7.62□□□□□ -1.19
BRCA1-224ENST00000497488 NEK4P51957 841 aa7.62□□□□□ -1.19
BRCA1-224ENST00000497488 PTPN11Q06124 597 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-224ENST00000497488 TRIM61Q5EBN2 209 aa7.62□□□□□ -1.19
BRCA1-224ENST00000497488 ANO1Q5XXA6 986 aa7.62□□□□□ -1.19
BRCA1-224ENST00000497488 HDGFL2Q7Z4V5 671 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-224ENST00000497488 SULF2Q8IWU5 870 aa7.62□□□□□ -1.19
BRCA1-224ENST00000497488 SMAP1Q8IYB5 467 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-224ENST00000497488 STK35Q8TDR2 534 aa7.62□□□□□ -1.19
BRCA1-224ENST00000497488 TTC1Q99614 292 aa7.62□□□□□ -1.19
BRCA1-224ENST00000497488 ELAC2Q9BQ52 826 aaKnown RBP7.62□□□□□ -1.19
BRCA1-224ENST00000497488 AARSD1Q9BTE6 412 aaKnown RBP7.62□□□□□ -1.19
BRCA1-224ENST00000497488 KLF16Q9BXK1 252 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-224ENST00000497488 GSX2Q9BZM3 304 aa7.62□□□□□ -1.19
BRCA1-224ENST00000497488 ZCCHC2Q9C0B9 1178 aaKnown RBP7.62□□□□□ -1.19
BRCA1-224ENST00000497488 MTFR1LQ9H019 292 aa7.62□□□□□ -1.19
BRCA1-224ENST00000497488 ATG3Q9NT62 314 aa7.62□□□□□ -1.19
BRCA1-224ENST00000497488 LUZP4Q9P127 313 aa7.62□□□□□ -1.19
BRCA1-224ENST00000497488 WNT7AO00755 349 aa7.61□□□□□ -1.19
BRCA1-224ENST00000497488 ZIC2O95409 532 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-224ENST00000497488 PGRP06401 933 aa7.61□□□□□ -1.19
BRCA1-224ENST00000497488 FAM163BP0C2L3 166 aa7.61□□□□□ -1.19
BRCA1-224ENST00000497488 RARAP10276 462 aa7.61□□□□□ -1.19
BRCA1-224ENST00000497488 NME1P15531 152 aaKnown RBP7.61□□□□□ -1.19
BRCA1-224ENST00000497488 PHKG2P15735 406 aa7.61□□□□□ -1.19
BRCA1-224ENST00000497488 MSX1P28360 303 aa7.61□□□□□ -1.19
BRCA1-224ENST00000497488 SERPINB3P29508 390 aa7.61□□□□□ -1.19
BRCA1-224ENST00000497488 KCNQ4P56696 695 aa7.61□□□□□ -1.19
BRCA1-224ENST00000497488 SUMO1P63165 101 aaKnown RBP7.61□□□□□ -1.19
BRCA1-224ENST00000497488 SLC7A5Q01650 507 aa7.61□□□□□ -1.19
BRCA1-224ENST00000497488 CCINQ13939 588 aa7.61□□□□□ -1.19
BRCA1-224ENST00000497488 HSP90AA2PQ14568 343 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-224ENST00000497488 MINDY4Q4G0A6 757 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms