RNA–Protein interactions for RNA: ENST00000497121.1

CPS1-208, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 4

Gene CPS1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-208ENST00000497121 SERPINB13Q9UIV8 391 aa8.94□□□□□ -0.98
CPS1-208ENST00000497121 MYH2Q9UKX2 1941 aa8.93□□□□□ -0.98
CPS1-208ENST00000497121 SMIM22K7EJ46 135 aa8.93□□□□□ -0.98
CPS1-208ENST00000497121 FMNL1O95466 1100 aaPredicted RBP8.93□□□□□ -0.98
CPS1-208ENST00000497121 GH2P01242 217 aa8.93□□□□□ -0.98
CPS1-208ENST00000497121 HLA-DOAP06340 250 aa8.93□□□□□ -0.98
CPS1-208ENST00000497121 CYP2D6P10635 497 aa8.93□□□□□ -0.98
CPS1-208ENST00000497121 HOXA7P31268 230 aaPredicted RBP8.93□□□□□ -0.98
CPS1-208ENST00000497121 RRP1P56182 461 aaKnown RBP8.93□□□□□ -0.98
CPS1-208ENST00000497121 PRKCZQ05513 592 aa8.93□□□□□ -0.98
CPS1-208ENST00000497121 MTMR2Q13614 643 aa8.93□□□□□ -0.98
CPS1-208ENST00000497121 UBE3CQ15386 1083 aa8.93□□□□□ -0.98
CPS1-208ENST00000497121 TTC6Q86TZ1 520 aa8.93□□□□□ -0.98
CPS1-208ENST00000497121 CRACR2BQ8N4Y2 399 aaPredicted RBP8.93□□□□□ -0.98
CPS1-208ENST00000497121 P2RX7Q99572 595 aaKnown RBP8.93□□□□□ -0.98
CPS1-208ENST00000497121 BCL11AQ9H165 835 aa8.93□□□□□ -0.98
CPS1-208ENST00000497121 ASCC2Q9H1I8 757 aaPredicted RBP8.93□□□□□ -0.98
CPS1-208ENST00000497121 ARMT1Q9H993 441 aa8.93□□□□□ -0.98
CPS1-208ENST00000497121 AS3MTQ9HBK9 375 aa8.93□□□□□ -0.98
CPS1-208ENST00000497121 DCP1AQ9NPI6 582 aaPredicted RBP8.93□□□□□ -0.98
CPS1-208ENST00000497121 EMILIN3Q9NT22 766 aa8.93□□□□□ -0.98
CPS1-208ENST00000497121 ECHDC1Q9NTX5 307 aa8.93□□□□□ -0.98
CPS1-208ENST00000497121 GABRQQ9UN88 632 aa8.93□□□□□ -0.98
CPS1-208ENST00000497121 MYH13Q9UKX3 1938 aa8.92□□□□□ -0.98
CPS1-208ENST00000497121 C19orf81C9J6K1 198 aa8.92□□□□□ -0.98
CPS1-208ENST00000497121 USP17L10C9JJH3 530 aa8.92□□□□□ -0.98
CPS1-208ENST00000497121 MBD4O95243 580 aa8.92□□□□□ -0.98
CPS1-208ENST00000497121 HOXD10P28358 340 aa8.92□□□□□ -0.98
CPS1-208ENST00000497121 FCGRTP55899 365 aa8.92□□□□□ -0.98
CPS1-208ENST00000497121 CACNB1Q02641 598 aaPredicted RBP8.92□□□□□ -0.98
CPS1-208ENST00000497121 FAM110CQ1W6H9 321 aa8.92□□□□□ -0.98
CPS1-208ENST00000497121 SLC9C1Q4G0N8 1177 aa8.92□□□□□ -0.98
CPS1-208ENST00000497121 ANKRD13CQ8N6S4 541 aa8.92□□□□□ -0.98
CPS1-208ENST00000497121 ACER1Q8TDN7 264 aa8.92□□□□□ -0.98
CPS1-208ENST00000497121 SDR42E1Q8WUS8 393 aa8.92□□□□□ -0.98
CPS1-208ENST00000497121 CRNKL1Q9BZJ0 848 aaKnown RBP8.92□□□□□ -0.98
CPS1-208ENST00000497121 MORF4L1Q9UBU8 362 aa8.92□□□□□ -0.98
CPS1-208ENST00000497121 GJD2Q9UKL4 321 aa8.92□□□□□ -0.98
CPS1-208ENST00000497121 MYPNQ86TC9 1320 aa8.91□□□□□ -0.98
CPS1-208ENST00000497121 PEX10O60683 326 aa8.91□□□□□ -0.98
CPS1-208ENST00000497121 POLR3DP05423 398 aaPredicted RBP8.91□□□□□ -0.98
CPS1-208ENST00000497121 GRK4P32298 578 aa8.91□□□□□ -0.98
CPS1-208ENST00000497121 GCLCP48506 637 aaPredicted RBP8.91□□□□□ -0.98
CPS1-208ENST00000497121 FLT3LGP49771 235 aa8.91□□□□□ -0.98
CPS1-208ENST00000497121 IRF5Q13568 498 aa8.91□□□□□ -0.98
CPS1-208ENST00000497121 MTFR1Q15390 333 aa8.91□□□□□ -0.98
CPS1-208ENST00000497121 CERKLQ49MI3 558 aaPredicted RBP8.91□□□□□ -0.98
CPS1-208ENST00000497121 TSHZ3Q63HK5 1081 aa8.91□□□□□ -0.98
CPS1-208ENST00000497121 NBPF11Q86T75 865 aa8.91□□□□□ -0.98
CPS1-208ENST00000497121 SIAH1Q8IUQ4 282 aa8.91□□□□□ -0.98
CPS1-208ENST00000497121 SLC44A5Q8NCS7 719 aa8.91□□□□□ -0.98
CPS1-208ENST00000497121 OTUD7AQ8TE49 926 aaPredicted RBP8.91□□□□□ -0.98
CPS1-208ENST00000497121 SMCR8Q8TEV9 937 aaPredicted RBP8.91□□□□□ -0.98
CPS1-208ENST00000497121 C12orf42Q96LP6 360 aa8.91□□□□□ -0.98
CPS1-208ENST00000497121 CRBNQ96SW2 442 aa8.91□□□□□ -0.98
CPS1-208ENST00000497121 PUS7LQ9H0K6 701 aaKnown RBP8.91□□□□□ -0.98
CPS1-208ENST00000497121 TXNRD2Q9NNW7 524 aa8.91□□□□□ -0.98
CPS1-208ENST00000497121 MCM9Q9NXL9 1143 aa8.91□□□□□ -0.98
CPS1-208ENST00000497121 RBPJLQ9UBG7 517 aa8.91□□□□□ -0.98
CPS1-208ENST00000497121 PNMA3Q9UL41 463 aa8.91□□□□□ -0.98
CPS1-208ENST00000497121 SALL3Q9BXA9 1300 aa8.9□□□□□ -0.98
CPS1-208ENST00000497121 CYP2D7A0A087X1C5 515 aa8.9□□□□□ -0.98
CPS1-208ENST00000497121 A0A1W2PRG0 241 aa8.9□□□□□ -0.98
CPS1-208ENST00000497121 PABPC4Q13310 644 aaKnown RBP eCLIP8.9□□□□□ -0.98
CPS1-208ENST00000497121 SEPT2Q15019 361 aa8.9□□□□□ -0.98
CPS1-208ENST00000497121 ABCB5Q2M3G0 1257 aa8.9□□□□□ -0.98
CPS1-208ENST00000497121 Q3C1V9 767 aa8.9□□□□□ -0.98
CPS1-208ENST00000497121 C12orf60Q5U649 245 aa8.9□□□□□ -0.98
CPS1-208ENST00000497121 USP17L2Q6R6M4 530 aa8.9□□□□□ -0.98
CPS1-208ENST00000497121 PI4K2BQ8TCG2 481 aa8.9□□□□□ -0.98
CPS1-208ENST00000497121 RAET1EQ8TD07 263 aa8.9□□□□□ -0.98
CPS1-208ENST00000497121 OSBP2Q969R2 916 aa8.9□□□□□ -0.98
CPS1-208ENST00000497121 DYNLL2Q96FJ2 89 aa8.9□□□□□ -0.98
CPS1-208ENST00000497121 STRBPQ96SI9 672 aaKnown RBP8.9□□□□□ -0.98
CPS1-208ENST00000497121 TRIM34Q9BYJ4 488 aa8.9□□□□□ -0.98
CPS1-208ENST00000497121 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.9□□□□□ -0.98
CPS1-208ENST00000497121 KIAA1683Q9H0B3 1180 aa8.9□□□□□ -0.98
CPS1-208ENST00000497121 ATP8A2Q9NTI2 1148 aa8.9□□□□□ -0.98
CPS1-208ENST00000497121 TMOD4Q9NZQ9 345 aa8.9□□□□□ -0.98
CPS1-208ENST00000497121 SIPA1L1O43166 1804 aa8.89□□□□□ -0.99
CPS1-208ENST00000497121 CEP290O15078 2479 aa8.89□□□□□ -0.99
CPS1-208ENST00000497121 USP17L12C9JPN9 530 aa8.89□□□□□ -0.99
CPS1-208ENST00000497121 USP17L21D6R901 530 aa8.89□□□□□ -0.99
CPS1-208ENST00000497121 TNPO2O14787 897 aaKnown RBP8.89□□□□□ -0.99
CPS1-208ENST00000497121 ADCY3O60266 1144 aa8.89□□□□□ -0.99
CPS1-208ENST00000497121 CNMDO75829 334 aa8.89□□□□□ -0.99
CPS1-208ENST00000497121 MYCP01106 439 aaPredicted RBP8.89□□□□□ -0.99
CPS1-208ENST00000497121 HERVK_113P62684 666 aa8.89□□□□□ -0.99
CPS1-208ENST00000497121 KIAA1755Q5JYT7 1200 aa8.89□□□□□ -0.99
CPS1-208ENST00000497121 CTR9Q6PD62 1173 aa8.89□□□□□ -0.99
CPS1-208ENST00000497121 CATSPERGQ6ZRH7 1159 aa8.89□□□□□ -0.99
CPS1-208ENST00000497121 UBE2Q1Q7Z7E8 422 aa8.89□□□□□ -0.99
CPS1-208ENST00000497121 KBTBD3Q8NAB2 608 aa8.89□□□□□ -0.99
CPS1-208ENST00000497121 PXYLP1Q8TE99 480 aa8.89□□□□□ -0.99
CPS1-208ENST00000497121 SHISA4Q96DD7 197 aa8.89□□□□□ -0.99
CPS1-208ENST00000497121 TMEM106CQ9BVX2 250 aa8.89□□□□□ -0.99
CPS1-208ENST00000497121 TAOK2Q9UL54 1235 aa8.89□□□□□ -0.99
CPS1-208ENST00000497121 GSG1L2A8MUP6 293 aa8.88□□□□□ -0.99
CPS1-208ENST00000497121 USP17L15C9J2P7 530 aa8.88□□□□□ -0.99
CPS1-208ENST00000497121 USP17L13C9JLJ4 530 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms