RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 WASF1Q92558 559 aa10.09□□□□□ -0.79
U2AF1-212ENST00000496462 M0R2C6 588 aa10.09□□□□□ -0.79
U2AF1-212ENST00000496462 CETPP11597 493 aa10.09□□□□□ -0.79
U2AF1-212ENST00000496462 DEFB115Q30KQ5 88 aa10.09□□□□□ -0.79
U2AF1-212ENST00000496462 PDRG1Q9NUG6 133 aa10.09□□□□□ -0.79
U2AF1-212ENST00000496462 COL1A1P02452 1464 aaPredicted RBP10.09□□□□□ -0.79
U2AF1-212ENST00000496462 MANSC4A6NHS7 340 aaPredicted RBP10.09□□□□□ -0.79
U2AF1-212ENST00000496462 ZBED4O75132 1171 aa10.09□□□□□ -0.79
U2AF1-212ENST00000496462 FGAP02671 866 aa10.09□□□□□ -0.79
U2AF1-212ENST00000496462 PPP2R5BQ15173 497 aa10.09□□□□□ -0.79
U2AF1-212ENST00000496462 SAFBQ15424 915 aaKnown RBP eCLIP10.09□□□□□ -0.79
U2AF1-212ENST00000496462 TMEM39BQ9GZU3 492 aa10.09□□□□□ -0.79
U2AF1-212ENST00000496462 SLC5A4Q9NY91 659 aa10.09□□□□□ -0.79
U2AF1-212ENST00000496462 GSPT1P15170 499 aaKnown RBP10.08□□□□□ -0.8
U2AF1-212ENST00000496462 CDK8P49336 464 aa10.08□□□□□ -0.8
U2AF1-212ENST00000496462 GTF2A2P52657 109 aa10.08□□□□□ -0.8
U2AF1-212ENST00000496462 WDR78Q5VTH9 848 aa10.08□□□□□ -0.8
U2AF1-212ENST00000496462 CREB3L3Q68CJ9 461 aa10.08□□□□□ -0.8
U2AF1-212ENST00000496462 USP17L2Q6R6M4 530 aa10.08□□□□□ -0.8
U2AF1-212ENST00000496462 SCYL3Q8IZE3 742 aa10.08□□□□□ -0.8
U2AF1-212ENST00000496462 EHMT1Q9H9B1 1298 aa10.08□□□□□ -0.8
U2AF1-212ENST00000496462 LAMB2P55268 1798 aa10.08□□□□□ -0.8
U2AF1-212ENST00000496462 C12orf60Q5U649 245 aa10.08□□□□□ -0.8
U2AF1-212ENST00000496462 CCDC12Q8WUD4 166 aaPredicted RBP10.08□□□□□ -0.8
U2AF1-212ENST00000496462 LZTS2Q9BRK4 669 aa10.08□□□□□ -0.8
U2AF1-212ENST00000496462 TCEAL9Q9UHQ7 104 aa10.08□□□□□ -0.8
U2AF1-212ENST00000496462 ADM5C9JUS6 153 aa10.08□□□□□ -0.8
U2AF1-212ENST00000496462 KDM4AO75164 1064 aa10.08□□□□□ -0.8
U2AF1-212ENST00000496462 EGFRP00533 1210 aa10.08□□□□□ -0.8
U2AF1-212ENST00000496462 TOP1P11387 765 aaKnown RBP10.08□□□□□ -0.8
U2AF1-212ENST00000496462 NOGQ13253 232 aa10.08□□□□□ -0.8
U2AF1-212ENST00000496462 DLK2Q6UY11 383 aa10.08□□□□□ -0.8
U2AF1-212ENST00000496462 KLRG1Q96E93 195 aa10.08□□□□□ -0.8
U2AF1-212ENST00000496462 TANGO6Q9C0B7 1094 aa10.08□□□□□ -0.8
U2AF1-212ENST00000496462 SLKQ9H2G2 1235 aaPredicted RBP10.08□□□□□ -0.8
U2AF1-212ENST00000496462 ZHX2Q9Y6X8 837 aa10.08□□□□□ -0.8
U2AF1-212ENST00000496462 IVNS1ABPQ9Y6Y0 642 aa10.08□□□□□ -0.8
U2AF1-212ENST00000496462 COL4A5P29400 1685 aa10.08□□□□□ -0.8
U2AF1-212ENST00000496462 TTLL1O95922 423 aa10.07□□□□□ -0.8
U2AF1-212ENST00000496462 CASTP20810 708 aaKnown RBP10.07□□□□□ -0.8
U2AF1-212ENST00000496462 NEK4P51957 841 aa10.07□□□□□ -0.8
U2AF1-212ENST00000496462 TTC14Q96N46 770 aa10.07□□□□□ -0.8
U2AF1-212ENST00000496462 SEC62Q99442 399 aaKnown RBP10.07□□□□□ -0.8
U2AF1-212ENST00000496462 MTA3Q9BTC8 594 aa10.07□□□□□ -0.8
U2AF1-212ENST00000496462 TIAM2Q8IVF5 1701 aa10.07□□□□□ -0.8
U2AF1-212ENST00000496462 USP17L10C9JJH3 530 aa10.07□□□□□ -0.8
U2AF1-212ENST00000496462 PRKAB2O43741 272 aa10.07□□□□□ -0.8
U2AF1-212ENST00000496462 TBC1D12O60347 775 aa10.07□□□□□ -0.8
U2AF1-212ENST00000496462 FDX1P10109 184 aa10.07□□□□□ -0.8
U2AF1-212ENST00000496462 SLC1A4P43007 532 aa10.07□□□□□ -0.8
U2AF1-212ENST00000496462 SLC4A3P48751 1232 aa10.07□□□□□ -0.8
U2AF1-212ENST00000496462 DHX32Q7L7V1 743 aaKnown RBP10.07□□□□□ -0.8
U2AF1-212ENST00000496462 CUL5Q93034 780 aa10.07□□□□□ -0.8
U2AF1-212ENST00000496462 ZMYM6O95789 1325 aa10.07□□□□□ -0.8
U2AF1-212ENST00000496462 PRC1O43663 620 aa10.07□□□□□ -0.8
U2AF1-212ENST00000496462 RGMBQ6NW40 437 aa10.07□□□□□ -0.8
U2AF1-212ENST00000496462 CLIP2Q9UDT6 1046 aa10.07□□□□□ -0.8
U2AF1-212ENST00000496462 GSG1L2A8MUP6 293 aa10.07□□□□□ -0.8
U2AF1-212ENST00000496462 CXCL11O14625 94 aa10.07□□□□□ -0.8
U2AF1-212ENST00000496462 HIRAP54198 1017 aaPredicted RBP10.07□□□□□ -0.8
U2AF1-212ENST00000496462 NBPF12Q5TAG4 269 aaPredicted RBP10.07□□□□□ -0.8
U2AF1-212ENST00000496462 RIOK1Q9BRS2 568 aaKnown RBP10.07□□□□□ -0.8
U2AF1-212ENST00000496462 ELP3Q9H9T3 547 aa10.07□□□□□ -0.8
U2AF1-212ENST00000496462 CREBZFQ9NS37 354 aa10.07□□□□□ -0.8
U2AF1-212ENST00000496462 RBM28Q9NW13 759 aaKnown RBP10.07□□□□□ -0.8
U2AF1-212ENST00000496462 SNED1Q8TER0 1413 aa10.06□□□□□ -0.8
U2AF1-212ENST00000496462 UBE2Q2LH0YL09 131 aa10.06□□□□□ -0.8
U2AF1-212ENST00000496462 GH2P01242 217 aa10.06□□□□□ -0.8
U2AF1-212ENST00000496462 PARP1P09874 1014 aaKnown RBP10.06□□□□□ -0.8
U2AF1-212ENST00000496462 COPB2P35606 906 aa10.06□□□□□ -0.8
U2AF1-212ENST00000496462 CTDSPL2Q05D32 466 aa10.06□□□□□ -0.8
U2AF1-212ENST00000496462 OTUD5Q96G74 571 aa10.06□□□□□ -0.8
U2AF1-212ENST00000496462 GOLGA8AA7E2F4 631 aa10.06□□□□□ -0.8
U2AF1-212ENST00000496462 GOLGA8BA8MQT2 603 aa10.06□□□□□ -0.8
U2AF1-212ENST00000496462 MARCH6O60337 910 aa10.06□□□□□ -0.8
U2AF1-212ENST00000496462 PRDM1O75626 825 aa10.06□□□□□ -0.8
U2AF1-212ENST00000496462 ITGBL1O95965 494 aaPredicted RBP10.06□□□□□ -0.8
U2AF1-212ENST00000496462 CTR9Q6PD62 1173 aa10.06□□□□□ -0.8
U2AF1-212ENST00000496462 MAP4K1Q92918 833 aa10.06□□□□□ -0.8
U2AF1-212ENST00000496462 ORC4O43929 436 aa10.06□□□□□ -0.8
U2AF1-212ENST00000496462 GDF11O95390 407 aa10.06□□□□□ -0.8
U2AF1-212ENST00000496462 PRAMEF18Q5VWM3 479 aa10.06□□□□□ -0.8
U2AF1-212ENST00000496462 FAM160B2Q86V87 743 aa10.06□□□□□ -0.8
U2AF1-212ENST00000496462 ZNF280CQ8ND82 737 aa10.06□□□□□ -0.8
U2AF1-212ENST00000496462 ZFYVE28Q9HCC9 887 aa10.06□□□□□ -0.8
U2AF1-212ENST00000496462 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.06□□□□□ -0.8
U2AF1-212ENST00000496462 SALL3Q9BXA9 1300 aa10.05□□□□□ -0.8
U2AF1-212ENST00000496462 PDIA4P13667 645 aaKnown RBP10.05□□□□□ -0.8
U2AF1-212ENST00000496462 PPATQ06203 517 aa10.05□□□□□ -0.8
U2AF1-212ENST00000496462 GPATCH4Q5T3I0 446 aaKnown RBP10.05□□□□□ -0.8
U2AF1-212ENST00000496462 STAG1Q8WVM7 1258 aa10.05□□□□□ -0.8
U2AF1-212ENST00000496462 LPAR1Q92633 364 aa10.05□□□□□ -0.8
U2AF1-212ENST00000496462 DDX60Q8IY21 1712 aaKnown RBP10.05□□□□□ -0.8
U2AF1-212ENST00000496462 ASTN2O75129 1339 aaPredicted RBP10.05□□□□□ -0.8
U2AF1-212ENST00000496462 B4E1Z4 1266 aa10.05□□□□□ -0.8
U2AF1-212ENST00000496462 SLC27A2O14975 620 aa10.05□□□□□ -0.8
U2AF1-212ENST00000496462 ZBTB43O43298 467 aa10.05□□□□□ -0.8
U2AF1-212ENST00000496462 HOXD10P28358 340 aa10.05□□□□□ -0.8
U2AF1-212ENST00000496462 NFIAQ12857 509 aa10.05□□□□□ -0.8
U2AF1-212ENST00000496462 RCSD1Q6JBY9 416 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms