RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 COLQQ9Y215 455 aaPredicted RBP13.29□□□□□ -0.28
RNF220-217ENST00000496262 ATAD5Q96QE3 1844 aa13.29□□□□□ -0.28
RNF220-217ENST00000496262 MGAMO43451 1857 aa13.28□□□□□ -0.28
RNF220-217ENST00000496262 APBB1O00213 710 aa13.28□□□□□ -0.28
RNF220-217ENST00000496262 PEX10O60683 326 aa13.28□□□□□ -0.28
RNF220-217ENST00000496262 HLA-DOAP06340 250 aa13.28□□□□□ -0.28
RNF220-217ENST00000496262 ASNSP08243 561 aa13.28□□□□□ -0.28
RNF220-217ENST00000496262 USP5P45974 858 aa13.28□□□□□ -0.28
RNF220-217ENST00000496262 IRX3P78415 501 aaPredicted RBP13.28□□□□□ -0.28
RNF220-217ENST00000496262 ZNF512BQ96KM6 892 aaPredicted RBP13.28□□□□□ -0.28
RNF220-217ENST00000496262 TBC1D2Q9BYX2 928 aa13.28□□□□□ -0.28
RNF220-217ENST00000496262 ANTXR1Q9H6X2 564 aa13.28□□□□□ -0.28
RNF220-217ENST00000496262 IL1RAPL2Q9NP60 686 aa13.28□□□□□ -0.28
RNF220-217ENST00000496262 TMOD4Q9NZQ9 345 aa13.28□□□□□ -0.28
RNF220-217ENST00000496262 LOC285556D6RIA3 1793 aa13.27□□□□□ -0.28
RNF220-217ENST00000496262 SIPA1L1O43166 1804 aa13.27□□□□□ -0.28
RNF220-217ENST00000496262 FARP2O94887 1054 aaPredicted RBP13.27□□□□□ -0.29
RNF220-217ENST00000496262 ANP32AP39687 249 aaKnown RBP13.27□□□□□ -0.29
RNF220-217ENST00000496262 GCLCP48506 637 aaPredicted RBP13.27□□□□□ -0.29
RNF220-217ENST00000496262 DEFB118Q96PH6 123 aa13.27□□□□□ -0.29
RNF220-217ENST00000496262 PCDH10Q9P2E7 1040 aa13.27□□□□□ -0.29
RNF220-217ENST00000496262 ZBTB21Q9ULJ3 1066 aa13.27□□□□□ -0.29
RNF220-217ENST00000496262 TFRCP02786 760 aaKnown RBP13.26□□□□□ -0.29
RNF220-217ENST00000496262 BACE1P56817 501 aa13.26□□□□□ -0.29
RNF220-217ENST00000496262 ZYXQ15942 572 aaKnown RBP13.26□□□□□ -0.29
RNF220-217ENST00000496262 SH3D19Q5HYK7 790 aa13.26□□□□□ -0.29
RNF220-217ENST00000496262 CHRDL2Q6WN34 429 aa13.26□□□□□ -0.29
RNF220-217ENST00000496262 PPP4R3CPQ6ZMV5 832 aa13.26□□□□□ -0.29
RNF220-217ENST00000496262 ERC1Q8IUD2 1116 aa13.26□□□□□ -0.29
RNF220-217ENST00000496262 FOXP4Q8IVH2 680 aaPredicted RBP13.26□□□□□ -0.29
RNF220-217ENST00000496262 PXYLP1Q8TE99 480 aa13.26□□□□□ -0.29
RNF220-217ENST00000496262 MYO5AQ9Y4I1 1855 aaKnown RBP13.25□□□□□ -0.29
RNF220-217ENST00000496262 SGPL1O95470 568 aa13.25□□□□□ -0.29
RNF220-217ENST00000496262 GH2P01242 217 aa13.25□□□□□ -0.29
RNF220-217ENST00000496262 MAP3K12Q12852 859 aa13.25□□□□□ -0.29
RNF220-217ENST00000496262 IRF5Q13568 498 aa13.25□□□□□ -0.29
RNF220-217ENST00000496262 P2RX7Q99572 595 aaKnown RBP13.25□□□□□ -0.29
RNF220-217ENST00000496262 HTATIP2Q9BUP3 242 aa13.25□□□□□ -0.29
RNF220-217ENST00000496262 WDR18Q9BV38 432 aa13.25□□□□□ -0.29
RNF220-217ENST00000496262 USP17L10C9JJH3 530 aa13.24□□□□□ -0.29
RNF220-217ENST00000496262 FXR1P51114 621 aaKnown RBP eCLIP13.24□□□□□ -0.29
RNF220-217ENST00000496262 TRIM32Q13049 653 aa13.24□□□□□ -0.29
RNF220-217ENST00000496262 RAB3GAP1Q15042 981 aa13.24□□□□□ -0.29
RNF220-217ENST00000496262 UBE2Q1Q7Z7E8 422 aa13.24□□□□□ -0.29
RNF220-217ENST00000496262 METTL16Q86W50 562 aaKnown RBP13.24□□□□□ -0.29
RNF220-217ENST00000496262 DNAJC2Q99543 621 aaKnown RBP13.24□□□□□ -0.29
RNF220-217ENST00000496262 FEZ1Q99689 392 aa13.24□□□□□ -0.29
RNF220-217ENST00000496262 PAGR1Q9BTK6 254 aa13.24□□□□□ -0.29
RNF220-217ENST00000496262 CDK5RAP2Q96SN8 1893 aa13.24□□□□□ -0.29
RNF220-217ENST00000496262 FOCADQ5VW36 1801 aa13.23□□□□□ -0.29
RNF220-217ENST00000496262 C19orf81C9J6K1 198 aa13.23□□□□□ -0.29
RNF220-217ENST00000496262 HMGCRP04035 888 aa13.23□□□□□ -0.29
RNF220-217ENST00000496262 CYP2B6P20813 491 aa13.23□□□□□ -0.29
RNF220-217ENST00000496262 HERVK_113P62684 666 aa13.23□□□□□ -0.29
RNF220-217ENST00000496262 CCAR1Q8IX12 1150 aaKnown RBP13.23□□□□□ -0.29
RNF220-217ENST00000496262 RHPN1Q8TCX5 695 aa13.23□□□□□ -0.29
RNF220-217ENST00000496262 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.23□□□□□ -0.29
RNF220-217ENST00000496262 TXNRD2Q9NNW7 524 aa13.23□□□□□ -0.29
RNF220-217ENST00000496262 PAK6Q9NQU5 681 aaPredicted RBP13.23□□□□□ -0.29
RNF220-217ENST00000496262 SERPINB13Q9UIV8 391 aa13.23□□□□□ -0.29
RNF220-217ENST00000496262 COG6Q9Y2V7 657 aa13.23□□□□□ -0.29
RNF220-217ENST00000496262 MAGEB6P1A0A0J9YX57 407 aa13.22□□□□□ -0.29
RNF220-217ENST00000496262 DEKP35659 375 aaKnown RBP13.22□□□□□ -0.29
RNF220-217ENST00000496262 HSP90AB4PQ58FF6 505 aa13.22□□□□□ -0.29
RNF220-217ENST00000496262 USP17L2Q6R6M4 530 aa13.22□□□□□ -0.29
RNF220-217ENST00000496262 CERS3Q8IU89 383 aa13.22□□□□□ -0.29
RNF220-217ENST00000496262 GPRC5AQ8NFJ5 357 aa13.22□□□□□ -0.29
RNF220-217ENST00000496262 DIS3LQ8TF46 1054 aaKnown RBP13.22□□□□□ -0.29
RNF220-217ENST00000496262 CWC22Q9HCG8 908 aaKnown RBP13.22□□□□□ -0.29
RNF220-217ENST00000496262 EMILIN3Q9NT22 766 aa13.22□□□□□ -0.29
RNF220-217ENST00000496262 MORF4L1Q9UBU8 362 aa13.22□□□□□ -0.29
RNF220-217ENST00000496262 GJD2Q9UKL4 321 aa13.22□□□□□ -0.29
RNF220-217ENST00000496262 GOLIM4O00461 696 aa13.21□□□□□ -0.29
RNF220-217ENST00000496262 EVI5O60447 810 aa13.21□□□□□ -0.29
RNF220-217ENST00000496262 IGSF3O75054 1194 aa13.21□□□□□ -0.29
RNF220-217ENST00000496262 POLR3DP05423 398 aaPredicted RBP13.21□□□□□ -0.29
RNF220-217ENST00000496262 IFIT2P09913 472 aaKnown RBP13.21□□□□□ -0.29
RNF220-217ENST00000496262 MS4A1P11836 297 aa13.21□□□□□ -0.29
RNF220-217ENST00000496262 HOXA7P31268 230 aaPredicted RBP13.21□□□□□ -0.29
RNF220-217ENST00000496262 RRP1P56182 461 aaKnown RBP13.21□□□□□ -0.29
RNF220-217ENST00000496262 PDE3AQ14432 1141 aa13.21□□□□□ -0.29
RNF220-217ENST00000496262 ABCB5Q2M3G0 1257 aa13.21□□□□□ -0.29
RNF220-217ENST00000496262 CERKLQ49MI3 558 aaPredicted RBP13.21□□□□□ -0.29
RNF220-217ENST00000496262 SLC9C2Q5TAH2 1124 aa13.21□□□□□ -0.29
RNF220-217ENST00000496262 TTC6Q86TZ1 520 aa13.21□□□□□ -0.29
RNF220-217ENST00000496262 CLASRPQ8N2M8 674 aaKnown RBP13.21□□□□□ -0.29
RNF220-217ENST00000496262 TRIB2Q92519 343 aa13.21□□□□□ -0.29
RNF220-217ENST00000496262 PAWRQ96IZ0 340 aaKnown RBP13.21□□□□□ -0.29
RNF220-217ENST00000496262 IPO9Q96P70 1041 aaKnown RBP13.21□□□□□ -0.29
RNF220-217ENST00000496262 RIOK1Q9BRS2 568 aaKnown RBP13.21□□□□□ -0.29
RNF220-217ENST00000496262 GINM1Q9NU53 330 aa13.21□□□□□ -0.29
RNF220-217ENST00000496262 RBM27Q9P2N5 1060 aaKnown RBP13.21□□□□□ -0.29
RNF220-217ENST00000496262 NR2E3Q9Y5X4 410 aa13.21□□□□□ -0.29
RNF220-217ENST00000496262 ZNF532Q9HCE3 1301 aa13.2□□□□□ -0.3
RNF220-217ENST00000496262 MPHOSPH10O00566 681 aaKnown RBP13.2□□□□□ -0.3
RNF220-217ENST00000496262 HMMRO75330 724 aa13.2□□□□□ -0.3
RNF220-217ENST00000496262 PRKAR2AP13861 404 aaKnown RBP13.2□□□□□ -0.3
RNF220-217ENST00000496262 PDE6AP16499 860 aa13.2□□□□□ -0.3
RNF220-217ENST00000496262 PLCD1P51178 756 aa13.2□□□□□ -0.3
RNF220-217ENST00000496262 ERVK-9P63128 1117 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms