RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 PKP1Q13835 747 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 CERKLQ49MI3 558 aaPredicted RBP10.01□□□□□ -0.81
VPS13B-206ENST00000496144 MAPKAPK5Q8IW41 473 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 NUDT12Q9BQG2 462 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 ZFYP08048 801 aaPredicted RBP10.01□□□□□ -0.81
VPS13B-206ENST00000496144 RGS2P41220 211 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 CCDC178Q5BJE1 867 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 PNMA2Q9UL42 364 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 HPS5Q9UPZ3 1129 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 RPAP1Q9BWH6 1393 aaPredicted RBP10.01□□□□□ -0.81
VPS13B-206ENST00000496144 CACNA1SQ13698 1873 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 GOLGA6L22H0YM25 854 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 CACNB3P54284 484 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 NMIQ13287 307 aaPredicted RBP10.01□□□□□ -0.81
VPS13B-206ENST00000496144 ABCB5Q2M3G0 1257 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 TCEAL9Q9UHQ7 104 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 RIPOR2Q9Y4F9 1068 aa10.01□□□□□ -0.81
VPS13B-206ENST00000496144 EVI5O60447 810 aa10□□□□□ -0.81
VPS13B-206ENST00000496144 FGD1P98174 961 aa10□□□□□ -0.81
VPS13B-206ENST00000496144 PTH1RQ03431 593 aa10□□□□□ -0.81
VPS13B-206ENST00000496144 TRAF1Q13077 416 aa10□□□□□ -0.81
VPS13B-206ENST00000496144 VGLL4Q14135 290 aa10□□□□□ -0.81
VPS13B-206ENST00000496144 ZNF280CQ8ND82 737 aa10□□□□□ -0.81
VPS13B-206ENST00000496144 SOCS4Q8WXH5 440 aa10□□□□□ -0.81
VPS13B-206ENST00000496144 RNF208Q9H0X6 261 aa10□□□□□ -0.81
VPS13B-206ENST00000496144 DAGLAQ9Y4D2 1042 aa10□□□□□ -0.81
VPS13B-206ENST00000496144 DDX60Q8IY21 1712 aaKnown RBP10□□□□□ -0.81
VPS13B-206ENST00000496144 BRPF3Q9ULD4 1205 aa10□□□□□ -0.81
VPS13B-206ENST00000496144 MAPK4P31152 587 aa10□□□□□ -0.81
VPS13B-206ENST00000496144 CPA4Q9UI42 421 aa10□□□□□ -0.81
VPS13B-206ENST00000496144 USP17L10C9JJH3 530 aa9.99□□□□□ -0.81
VPS13B-206ENST00000496144 PHKA1P46020 1223 aa9.99□□□□□ -0.81
VPS13B-206ENST00000496144 MOB2Q70IA6 237 aa9.99□□□□□ -0.81
VPS13B-206ENST00000496144 GZF1Q9H116 711 aaPredicted RBP9.99□□□□□ -0.81
VPS13B-206ENST00000496144 CCDC171Q6TFL3 1326 aa9.99□□□□□ -0.81
VPS13B-206ENST00000496144 KCTD2Q14681 263 aa9.99□□□□□ -0.81
VPS13B-206ENST00000496144 MCTP1Q6DN14 999 aa9.99□□□□□ -0.81
VPS13B-206ENST00000496144 CDC42EP5Q6NZY7 148 aa9.99□□□□□ -0.81
VPS13B-206ENST00000496144 USP17L15C9J2P7 530 aa9.99□□□□□ -0.81
VPS13B-206ENST00000496144 USP17L13C9JLJ4 530 aa9.99□□□□□ -0.81
VPS13B-206ENST00000496144 USP17L11C9JVI0 530 aa9.99□□□□□ -0.81
VPS13B-206ENST00000496144 USP17L18D6R9N7 530 aa9.99□□□□□ -0.81
VPS13B-206ENST00000496144 USP17L22D6RA61 530 aa9.99□□□□□ -0.81
VPS13B-206ENST00000496144 USP17L17D6RBQ6 530 aa9.99□□□□□ -0.81
VPS13B-206ENST00000496144 USP17L19D6RCP7 530 aa9.99□□□□□ -0.81
VPS13B-206ENST00000496144 USP17L20D6RJB6 530 aa9.99□□□□□ -0.81
VPS13B-206ENST00000496144 ATP5JP18859 108 aa9.99□□□□□ -0.81
VPS13B-206ENST00000496144 TIMM10P62072 90 aa9.99□□□□□ -0.81
VPS13B-206ENST00000496144 USP17L24Q0WX57 530 aa9.99□□□□□ -0.81
VPS13B-206ENST00000496144 GPRC5AQ8NFJ5 357 aa9.99□□□□□ -0.81
VPS13B-206ENST00000496144 MTIF3Q9H2K0 278 aaKnown RBP9.99□□□□□ -0.81
VPS13B-206ENST00000496144 HOXC10Q9NYD6 342 aa9.99□□□□□ -0.81
VPS13B-206ENST00000496144 SCAF8Q9UPN6 1271 aaKnown RBP9.99□□□□□ -0.81
VPS13B-206ENST00000496144 NUP98P52948 1817 aa9.99□□□□□ -0.81
VPS13B-206ENST00000496144 CCDC96Q2M329 555 aa9.99□□□□□ -0.81
VPS13B-206ENST00000496144 NRXN2Q9P2S2 1712 aa9.99□□□□□ -0.81
VPS13B-206ENST00000496144 SPDYE5A6NIY4 337 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 DDX11Q96FC9 970 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 CCDC17Q96LX7 622 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 LMBRD1Q9NUN5 540 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 MINDY4BA8MYZ0 360 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 GOLIM4O00461 696 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 RASEFQ8IZ41 740 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 SLC4A4Q9Y6R1 1079 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 FMR1Q06787 632 aaKnown RBP eCLIP9.98□□□□□ -0.81
VPS13B-206ENST00000496144 NECTIN1Q15223 517 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 DIXDC1Q155Q3 683 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 KLHL40Q2TBA0 621 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 SLC9C2Q5TAH2 1124 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 ATG9AQ7Z3C6 839 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 NCAPG2Q86XI2 1143 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 NAPBQ9H115 298 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 ADCY3O60266 1144 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 BRD1O95696 1058 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 GRK4P32298 578 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 MECOMQ03112 1051 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 SART3Q15020 963 aaKnown RBP9.98□□□□□ -0.81
VPS13B-206ENST00000496144 SYNE3Q6ZMZ3 975 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 NECAB2Q7Z6G3 386 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 FAM227BQ96M60 508 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 DBNLQ9UJU6 430 aaKnown RBP9.98□□□□□ -0.81
VPS13B-206ENST00000496144 USP2O75604 605 aaPredicted RBP9.98□□□□□ -0.81
VPS13B-206ENST00000496144 AK2P54819 239 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 ZYXQ15942 572 aaKnown RBP9.98□□□□□ -0.81
VPS13B-206ENST00000496144 VPS53Q5VIR6 699 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 RUFY3Q7L099 469 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 ZSWIM6Q9HCJ5 1215 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 HMX1Q9NP08 348 aaPredicted RBP9.98□□□□□ -0.81
VPS13B-206ENST00000496144 CNPY2Q9Y2B0 182 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 COL24A1Q17RW2 1714 aa9.98□□□□□ -0.81
VPS13B-206ENST00000496144 PROCA1Q8NCQ7 364 aaPredicted RBP9.97□□□□□ -0.81
VPS13B-206ENST00000496144 ZKSCAN4Q969J2 545 aaPredicted RBP9.97□□□□□ -0.81
VPS13B-206ENST00000496144 BOLA2Q9H3K6 86 aa9.97□□□□□ -0.81
VPS13B-206ENST00000496144 MIGA1Q8NAN2 632 aa9.97□□□□□ -0.81
VPS13B-206ENST00000496144 MAP4K1Q92918 833 aa9.97□□□□□ -0.81
VPS13B-206ENST00000496144 TM6SF1Q9BZW5 370 aa9.97□□□□□ -0.81
VPS13B-206ENST00000496144 A0A0D9SFI3 127 aa9.97□□□□□ -0.81
VPS13B-206ENST00000496144 CASTP20810 708 aaKnown RBP9.97□□□□□ -0.81
VPS13B-206ENST00000496144 KLRK1P26718 216 aa9.97□□□□□ -0.81
VPS13B-206ENST00000496144 HAUS7Q99871 368 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms