RNA–Protein interactions for RNA: ENST00000496143.5

PPM1F-208, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 4

Gene PPM1F, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-208ENST00000496143 PLCD1P51178 756 aa25.54■■□□□ 1.68
PPM1F-208ENST00000496143 PROCA1Q8NCQ7 364 aaPredicted RBP25.54■■□□□ 1.68
PPM1F-208ENST00000496143 WDR18Q9BV38 432 aa25.54■■□□□ 1.68
PPM1F-208ENST00000496143 LNPKQ9C0E8 428 aa25.54■■□□□ 1.68
PPM1F-208ENST00000496143 DDX60LQ5H9U9 1706 aaKnown RBP25.54■■□□□ 1.68
PPM1F-208ENST00000496143 ATAD5Q96QE3 1844 aa25.53■■□□□ 1.68
PPM1F-208ENST00000496143 PRKAB2O43741 272 aa25.53■■□□□ 1.68
PPM1F-208ENST00000496143 IGHDP01880 384 aa25.53■■□□□ 1.68
PPM1F-208ENST00000496143 CHGBP05060 677 aa25.53■■□□□ 1.68
PPM1F-208ENST00000496143 PDE1AP54750 535 aa25.53■■□□□ 1.68
PPM1F-208ENST00000496143 KIF22Q14807 665 aa25.53■■□□□ 1.68
PPM1F-208ENST00000496143 CERKLQ49MI3 558 aaPredicted RBP25.53■■□□□ 1.68
PPM1F-208ENST00000496143 B4GALNT3Q6L9W6 998 aa25.53■■□□□ 1.68
PPM1F-208ENST00000496143 GPAT2Q6NUI2 795 aa25.53■■□□□ 1.68
PPM1F-208ENST00000496143 CABP5Q9NP86 173 aa25.53■■□□□ 1.68
PPM1F-208ENST00000496143 PABPC4Q13310 644 aaKnown RBP eCLIP25.52■■□□□ 1.68
PPM1F-208ENST00000496143 CHD1LQ86WJ1 897 aa25.52■■□□□ 1.68
PPM1F-208ENST00000496143 SWAP70Q9UH65 585 aa25.52■■□□□ 1.68
PPM1F-208ENST00000496143 AGTPBP1Q9UPW5 1226 aa25.52■■□□□ 1.68
PPM1F-208ENST00000496143 PHIPQ8WWQ0 1821 aa25.51■■□□□ 1.67
PPM1F-208ENST00000496143 GH2P01242 217 aa25.51■■□□□ 1.67
PPM1F-208ENST00000496143 GNAT2P19087 354 aa25.51■■□□□ 1.67
PPM1F-208ENST00000496143 GABPAQ06546 454 aa25.51■■□□□ 1.67
PPM1F-208ENST00000496143 ABCB5Q2M3G0 1257 aa25.51■■□□□ 1.67
PPM1F-208ENST00000496143 CD99L2Q8TCZ2 262 aa25.51■■□□□ 1.67
PPM1F-208ENST00000496143 OSBP2Q969R2 916 aa25.51■■□□□ 1.67
PPM1F-208ENST00000496143 EVI5LQ96CN4 794 aa25.51■■□□□ 1.67
PPM1F-208ENST00000496143 STRBPQ96SI9 672 aaKnown RBP25.51■■□□□ 1.67
PPM1F-208ENST00000496143 TMOD4Q9NZQ9 345 aa25.51■■□□□ 1.67
PPM1F-208ENST00000496143 PNMA3Q9UL41 463 aa25.51■■□□□ 1.67
PPM1F-208ENST00000496143 TRIM17Q9Y577 477 aa25.51■■□□□ 1.67
PPM1F-208ENST00000496143 C19orf81C9J6K1 198 aa25.5■■□□□ 1.67
PPM1F-208ENST00000496143 HMGCS2P54868 508 aa25.5■■□□□ 1.67
PPM1F-208ENST00000496143 IRX6P78412 446 aaPredicted RBP25.5■■□□□ 1.67
PPM1F-208ENST00000496143 NUCB1Q02818 461 aa25.5■■□□□ 1.67
PPM1F-208ENST00000496143 SH3D19Q5HYK7 790 aa25.5■■□□□ 1.67
PPM1F-208ENST00000496143 FBXO46Q6PJ61 603 aaPredicted RBP25.5■■□□□ 1.67
PPM1F-208ENST00000496143 EFCC1Q9HA90 598 aa25.5■■□□□ 1.67
PPM1F-208ENST00000496143 ARPP21Q9UBL0 812 aaPredicted RBP25.5■■□□□ 1.67
PPM1F-208ENST00000496143 USP17L10C9JJH3 530 aa25.49■■□□□ 1.67
PPM1F-208ENST00000496143 SHMT1P34896 483 aa25.49■■□□□ 1.67
PPM1F-208ENST00000496143 BACE1P56817 501 aa25.49■■□□□ 1.67
PPM1F-208ENST00000496143 GIMAP6Q6P9H5 292 aa25.49■■□□□ 1.67
PPM1F-208ENST00000496143 CCDC85CA6NKD9 419 aa25.48■■□□□ 1.67
PPM1F-208ENST00000496143 USP17L12C9JPN9 530 aa25.48■■□□□ 1.67
PPM1F-208ENST00000496143 USP17L21D6R901 530 aa25.48■■□□□ 1.67
PPM1F-208ENST00000496143 GPAA1O43292 621 aa25.48■■□□□ 1.67
PPM1F-208ENST00000496143 JAG1P78504 1218 aa25.48■■□□□ 1.67
PPM1F-208ENST00000496143 MTMR2Q13614 643 aa25.48■■□□□ 1.67
PPM1F-208ENST00000496143 C12orf60Q5U649 245 aa25.48■■□□□ 1.67
PPM1F-208ENST00000496143 C17orf99Q6UX52 265 aa25.48■■□□□ 1.67
PPM1F-208ENST00000496143 OTOP1Q7RTM1 612 aa25.48■■□□□ 1.67
PPM1F-208ENST00000496143 SMCR8Q8TEV9 937 aaPredicted RBP25.48■■□□□ 1.67
PPM1F-208ENST00000496143 CPA4Q9UI42 421 aa25.48■■□□□ 1.67
PPM1F-208ENST00000496143 PTPRFP10586 1907 aa25.47■■□□□ 1.67
PPM1F-208ENST00000496143 ADGRA2Q96PE1 1338 aa25.47■■□□□ 1.67
PPM1F-208ENST00000496143 CYP2C8P10632 490 aa25.47■■□□□ 1.67
PPM1F-208ENST00000496143 CYP2D6P10635 497 aa25.47■■□□□ 1.67
PPM1F-208ENST00000496143 RAB3GAP1Q15042 981 aa25.47■■□□□ 1.67
PPM1F-208ENST00000496143 TICAM2Q86XR7 235 aa25.47■■□□□ 1.67
PPM1F-208ENST00000496143 OSBPP22059 807 aa25.46■■□□□ 1.67
PPM1F-208ENST00000496143 LACTBP83111 547 aaPredicted RBP25.46■■□□□ 1.67
PPM1F-208ENST00000496143 SHROOM1Q2M3G4 852 aaPredicted RBP25.46■■□□□ 1.67
PPM1F-208ENST00000496143 FEZ1Q99689 392 aa25.46■■□□□ 1.67
PPM1F-208ENST00000496143 M0R2C6 588 aa25.45■■□□□ 1.66
PPM1F-208ENST00000496143 MPHOSPH10O00566 681 aaKnown RBP25.45■■□□□ 1.66
PPM1F-208ENST00000496143 GNRH1P01148 92 aa25.45■■□□□ 1.66
PPM1F-208ENST00000496143 ZMYM1Q5SVZ6 1142 aa25.45■■□□□ 1.66
PPM1F-208ENST00000496143 TREML2Q5T2D2 321 aa25.45■■□□□ 1.66
PPM1F-208ENST00000496143 CTR9Q6PD62 1173 aa25.45■■□□□ 1.66
PPM1F-208ENST00000496143 NACAP1Q9BZK3 213 aa25.45■■□□□ 1.66
PPM1F-208ENST00000496143 HPS5Q9UPZ3 1129 aa25.45■■□□□ 1.66
PPM1F-208ENST00000496143 LOC285556D6RIA3 1793 aa25.44■■□□□ 1.66
PPM1F-208ENST00000496143 GSG1L2A8MUP6 293 aa25.44■■□□□ 1.66
PPM1F-208ENST00000496143 APPP05067 770 aa25.44■■□□□ 1.66
PPM1F-208ENST00000496143 USP14P54578 494 aa25.44■■□□□ 1.66
PPM1F-208ENST00000496143 SBK1Q52WX2 424 aa25.44■■□□□ 1.66
PPM1F-208ENST00000496143 USP17L2Q6R6M4 530 aa25.44■■□□□ 1.66
PPM1F-208ENST00000496143 DYNLL2Q96FJ2 89 aa25.44■■□□□ 1.66
PPM1F-208ENST00000496143 CCDC17Q96LX7 622 aa25.44■■□□□ 1.66
PPM1F-208ENST00000496143 TRIM6-TRIM34B2RNG4 842 aa25.43■■□□□ 1.66
PPM1F-208ENST00000496143 TDO2P48775 406 aa25.43■■□□□ 1.66
PPM1F-208ENST00000496143 TMEM179Q6ZVK1 233 aa25.43■■□□□ 1.66
PPM1F-208ENST00000496143 C16orf86Q6ZW13 317 aa25.43■■□□□ 1.66
PPM1F-208ENST00000496143 OSBPL3Q9H4L5 887 aa25.43■■□□□ 1.66
PPM1F-208ENST00000496143 CYP2D7A0A087X1C5 515 aa25.42■■□□□ 1.66
PPM1F-208ENST00000496143 PATL2C9JE40 543 aaKnown RBP25.42■■□□□ 1.66
PPM1F-208ENST00000496143 BCRP11274 1271 aa25.42■■□□□ 1.66
PPM1F-208ENST00000496143 CDK8P49336 464 aa25.42■■□□□ 1.66
PPM1F-208ENST00000496143 IRX3P78415 501 aaPredicted RBP25.42■■□□□ 1.66
PPM1F-208ENST00000496143 EVX2Q03828 476 aa25.42■■□□□ 1.66
PPM1F-208ENST00000496143 PLEKHM2Q8IWE5 1019 aa25.42■■□□□ 1.66
PPM1F-208ENST00000496143 SLC44A5Q8NCS7 719 aa25.42■■□□□ 1.66
PPM1F-208ENST00000496143 PTPN22Q9Y2R2 807 aa25.42■■□□□ 1.66
PPM1F-208ENST00000496143 BAZ2AQ9UIF9 1905 aaKnown RBP25.41■■□□□ 1.66
PPM1F-208ENST00000496143 HOXD10P28358 340 aa25.41■■□□□ 1.66
PPM1F-208ENST00000496143 GCLCP48506 637 aaPredicted RBP25.41■■□□□ 1.66
PPM1F-208ENST00000496143 KIAA1683Q9H0B3 1180 aa25.41■■□□□ 1.66
PPM1F-208ENST00000496143 ZNF287Q9HBT7 754 aa25.41■■□□□ 1.66
PPM1F-208ENST00000496143 HOXA7P31268 230 aaPredicted RBP25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms