RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 RPS6KB1P23443 525 aa25.73■■□□□ 1.71
ECHDC3-205ENST00000496136 MCM5P33992 734 aa25.73■■□□□ 1.71
ECHDC3-205ENST00000496136 NEK4P51957 841 aa25.73■■□□□ 1.71
ECHDC3-205ENST00000496136 TFAP4Q01664 338 aa25.73■■□□□ 1.71
ECHDC3-205ENST00000496136 RRP1BQ14684 758 aaKnown RBP25.73■■□□□ 1.71
ECHDC3-205ENST00000496136 RABEP1Q15276 862 aa25.73■■□□□ 1.71
ECHDC3-205ENST00000496136 DCAF15Q66K64 600 aa25.73■■□□□ 1.71
ECHDC3-205ENST00000496136 CHADLQ6NUI6 762 aa25.73■■□□□ 1.71
ECHDC3-205ENST00000496136 ZNF784Q8NCA9 323 aaPredicted RBP25.73■■□□□ 1.71
ECHDC3-205ENST00000496136 TSPY2A6NKD2 308 aa25.72■■□□□ 1.71
ECHDC3-205ENST00000496136 TRAF5O00463 557 aa25.72■■□□□ 1.71
ECHDC3-205ENST00000496136 NT5C2P49902 561 aa25.72■■□□□ 1.71
ECHDC3-205ENST00000496136 ANTXR2P58335 489 aa25.72■■□□□ 1.71
ECHDC3-205ENST00000496136 CCDC17Q96LX7 622 aa25.72■■□□□ 1.71
ECHDC3-205ENST00000496136 TCEANC2Q96MN5 208 aa25.72■■□□□ 1.71
ECHDC3-205ENST00000496136 SSC5DA1L4H1 1573 aa25.72■■□□□ 1.71
ECHDC3-205ENST00000496136 PHF20L1A8MW92 1017 aa25.72■■□□□ 1.71
ECHDC3-205ENST00000496136 FZD1Q9UP38 647 aa25.72■■□□□ 1.71
ECHDC3-205ENST00000496136 TSPY3P0CV98 308 aa25.71■■□□□ 1.71
ECHDC3-205ENST00000496136 TSPY8P0CW00 308 aa25.71■■□□□ 1.71
ECHDC3-205ENST00000496136 AKR1B1P15121 316 aa25.71■■□□□ 1.71
ECHDC3-205ENST00000496136 PRC1O43663 620 aa25.7■■□□□ 1.7
ECHDC3-205ENST00000496136 FMR1Q06787 632 aaKnown RBP eCLIP25.7■■□□□ 1.7
ECHDC3-205ENST00000496136 ZNF341Q9BYN7 854 aa25.7■■□□□ 1.7
ECHDC3-205ENST00000496136 USP2O75604 605 aaPredicted RBP25.69■■□□□ 1.7
ECHDC3-205ENST00000496136 ITGBL1O95965 494 aaPredicted RBP25.69■■□□□ 1.7
ECHDC3-205ENST00000496136 NF2P35240 595 aa25.69■■□□□ 1.7
ECHDC3-205ENST00000496136 NEDD1Q8NHV4 660 aa25.69■■□□□ 1.7
ECHDC3-205ENST00000496136 ZKSCAN3Q9BRR0 538 aa25.69■■□□□ 1.7
ECHDC3-205ENST00000496136 ZNF112Q9UJU3 913 aa25.69■■□□□ 1.7
ECHDC3-205ENST00000496136 GDF11O95390 407 aa25.69■■□□□ 1.7
ECHDC3-205ENST00000496136 JAG1P78504 1218 aa25.69■■□□□ 1.7
ECHDC3-205ENST00000496136 PRKG1Q13976 671 aa25.69■■□□□ 1.7
ECHDC3-205ENST00000496136 SHROOM1Q2M3G4 852 aaPredicted RBP25.69■■□□□ 1.7
ECHDC3-205ENST00000496136 TTC14Q96N46 770 aa25.69■■□□□ 1.7
ECHDC3-205ENST00000496136 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.69■■□□□ 1.7
ECHDC3-205ENST00000496136 LRRC2Q9BYS8 371 aa25.69■■□□□ 1.7
ECHDC3-205ENST00000496136 IL17RBQ9NRM6 502 aa25.69■■□□□ 1.7
ECHDC3-205ENST00000496136 PDRG1Q9NUG6 133 aa25.69■■□□□ 1.7
ECHDC3-205ENST00000496136 WDR19Q8NEZ3 1342 aa25.69■■□□□ 1.7
ECHDC3-205ENST00000496136 PPP1R12BO60237 982 aaPredicted RBP25.68■■□□□ 1.7
ECHDC3-205ENST00000496136 NMT2O60551 498 aa25.68■■□□□ 1.7
ECHDC3-205ENST00000496136 CAP2P40123 477 aa25.68■■□□□ 1.7
ECHDC3-205ENST00000496136 ABCB5Q2M3G0 1257 aa25.68■■□□□ 1.7
ECHDC3-205ENST00000496136 IQCA1Q86XH1 822 aa25.68■■□□□ 1.7
ECHDC3-205ENST00000496136 KLRG1Q96E93 195 aa25.68■■□□□ 1.7
ECHDC3-205ENST00000496136 MPHOSPH10O00566 681 aaKnown RBP25.67■■□□□ 1.7
ECHDC3-205ENST00000496136 IGDCC4Q8TDY8 1250 aa25.67■■□□□ 1.7
ECHDC3-205ENST00000496136 TCP11L1Q9NUJ3 509 aa25.67■■□□□ 1.7
ECHDC3-205ENST00000496136 TMEM87BQ96K49 555 aa25.67■■□□□ 1.7
ECHDC3-205ENST00000496136 ZSCAN10Q96SZ4 725 aaPredicted RBP25.67■■□□□ 1.7
ECHDC3-205ENST00000496136 UBAC1Q9BSL1 405 aa25.67■■□□□ 1.7
ECHDC3-205ENST00000496136 MTA3Q9BTC8 594 aa25.67■■□□□ 1.7
ECHDC3-205ENST00000496136 IFIT3O14879 490 aaKnown RBP25.66■■□□□ 1.7
ECHDC3-205ENST00000496136 CTNND1O60716 968 aaKnown RBP25.66■■□□□ 1.7
ECHDC3-205ENST00000496136 INPP5BP32019 993 aa25.66■■□□□ 1.7
ECHDC3-205ENST00000496136 Q6ZUG5 572 aa25.66■■□□□ 1.7
ECHDC3-205ENST00000496136 WRNIP1Q96S55 665 aa25.66■■□□□ 1.7
ECHDC3-205ENST00000496136 ALDH8A1Q9H2A2 487 aaPredicted RBP25.66■■□□□ 1.7
ECHDC3-205ENST00000496136 GPHNQ9NQX3 736 aaPredicted RBP25.66■■□□□ 1.7
ECHDC3-205ENST00000496136 GH2P01242 217 aa25.65■■□□□ 1.7
ECHDC3-205ENST00000496136 FBXL16Q8N461 479 aa25.65■■□□□ 1.7
ECHDC3-205ENST00000496136 IL27Q8NEV9 243 aa25.65■■□□□ 1.7
ECHDC3-205ENST00000496136 CABP5Q9NP86 173 aa25.65■■□□□ 1.7
ECHDC3-205ENST00000496136 IGKV6D-41A0A0C4DH26 115 aa25.64■■□□□ 1.7
ECHDC3-205ENST00000496136 TNKSO95271 1327 aa25.64■■□□□ 1.7
ECHDC3-205ENST00000496136 GUCY1A2P33402 732 aa25.64■■□□□ 1.7
ECHDC3-205ENST00000496136 SART3Q15020 963 aaKnown RBP25.64■■□□□ 1.7
ECHDC3-205ENST00000496136 TMEM179Q6ZVK1 233 aa25.64■■□□□ 1.7
ECHDC3-205ENST00000496136 PLIN4Q96Q06 1357 aa25.64■■□□□ 1.7
ECHDC3-205ENST00000496136 AGXT2Q9BYV1 514 aa25.64■■□□□ 1.7
ECHDC3-205ENST00000496136 FGD1P98174 961 aa25.64■■□□□ 1.69
ECHDC3-205ENST00000496136 SEC23AQ15436 765 aa25.64■■□□□ 1.69
ECHDC3-205ENST00000496136 TMEM67Q5HYA8 995 aa25.64■■□□□ 1.69
ECHDC3-205ENST00000496136 ENAHQ8N8S7 591 aaPredicted RBP25.64■■□□□ 1.69
ECHDC3-205ENST00000496136 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.64■■□□□ 1.69
ECHDC3-205ENST00000496136 ZKSCAN4Q969J2 545 aaPredicted RBP25.64■■□□□ 1.69
ECHDC3-205ENST00000496136 CEP95Q96GE4 821 aa25.64■■□□□ 1.69
ECHDC3-205ENST00000496136 ZNF408Q9H9D4 720 aa25.64■■□□□ 1.69
ECHDC3-205ENST00000496136 ANGEL1Q9UNK9 670 aaKnown RBP25.64■■□□□ 1.69
ECHDC3-205ENST00000496136 RBM19Q9Y4C8 960 aaKnown RBP25.64■■□□□ 1.69
ECHDC3-205ENST00000496136 GREB1LQ9C091 1923 aaPredicted RBP25.63■■□□□ 1.69
ECHDC3-205ENST00000496136 ST18O60284 1047 aa25.63■■□□□ 1.69
ECHDC3-205ENST00000496136 TOMM70O94826 608 aa25.63■■□□□ 1.69
ECHDC3-205ENST00000496136 AK2P54819 239 aa25.63■■□□□ 1.69
ECHDC3-205ENST00000496136 TOB2Q14106 344 aaPredicted RBP25.63■■□□□ 1.69
ECHDC3-205ENST00000496136 SEPT2Q15019 361 aa25.63■■□□□ 1.69
ECHDC3-205ENST00000496136 RCSD1Q6JBY9 416 aa25.63■■□□□ 1.69
ECHDC3-205ENST00000496136 MOB2Q70IA6 237 aa25.63■■□□□ 1.69
ECHDC3-205ENST00000496136 MTMR4Q9NYA4 1195 aa25.63■■□□□ 1.69
ECHDC3-205ENST00000496136 ZBTB21Q9ULJ3 1066 aa25.63■■□□□ 1.69
ECHDC3-205ENST00000496136 ERICH2A1L162 156 aa25.62■■□□□ 1.69
ECHDC3-205ENST00000496136 SH2B2O14492 632 aaPredicted RBP25.62■■□□□ 1.69
ECHDC3-205ENST00000496136 CD2BP2O95400 341 aaKnown RBP25.62■■□□□ 1.69
ECHDC3-205ENST00000496136 MAP3K9P80192 1104 aa25.62■■□□□ 1.69
ECHDC3-205ENST00000496136 MAP3K11Q16584 847 aa25.62■■□□□ 1.69
ECHDC3-205ENST00000496136 CCDC178Q5BJE1 867 aa25.62■■□□□ 1.69
ECHDC3-205ENST00000496136 DGKHQ86XP1 1220 aa25.62■■□□□ 1.69
ECHDC3-205ENST00000496136 KANSL2Q9H9L4 492 aa25.62■■□□□ 1.69
ECHDC3-205ENST00000496136 LY9Q9HBG7 655 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms