RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 USP17L12C9JPN9 530 aa12.73□□□□□ -0.37
CMSS1-208ENST00000496116 USP17L21D6R901 530 aa12.73□□□□□ -0.37
CMSS1-208ENST00000496116 DDAH1O94760 285 aa12.73□□□□□ -0.37
CMSS1-208ENST00000496116 KLRK1P26718 216 aa12.73□□□□□ -0.37
CMSS1-208ENST00000496116 GSDMDP57764 484 aa12.73□□□□□ -0.37
CMSS1-208ENST00000496116 DHX8Q14562 1220 aaKnown RBP12.73□□□□□ -0.37
CMSS1-208ENST00000496116 KRBA2Q6ZNG9 492 aa12.73□□□□□ -0.37
CMSS1-208ENST00000496116 SMIM5Q71RC9 77 aa12.73□□□□□ -0.37
CMSS1-208ENST00000496116 PTF1AQ7RTS3 328 aa12.73□□□□□ -0.37
CMSS1-208ENST00000496116 ZNF384Q8TF68 577 aa12.73□□□□□ -0.37
CMSS1-208ENST00000496116 NOL10Q9BSC4 688 aaKnown RBP12.73□□□□□ -0.37
CMSS1-208ENST00000496116 TFCP2L1Q9NZI6 479 aa12.73□□□□□ -0.37
CMSS1-208ENST00000496116 IMPACTQ9P2X3 320 aa12.73□□□□□ -0.37
CMSS1-208ENST00000496116 ARPP21Q9UBL0 812 aaPredicted RBP12.73□□□□□ -0.37
CMSS1-208ENST00000496116 USP21Q9UK80 565 aa12.73□□□□□ -0.37
CMSS1-208ENST00000496116 DLEC1Q9Y238 1755 aa12.73□□□□□ -0.37
CMSS1-208ENST00000496116 LAMB1P07942 1786 aa12.73□□□□□ -0.37
CMSS1-208ENST00000496116 PRPF3O43395 683 aaKnown RBP12.73□□□□□ -0.37
CMSS1-208ENST00000496116 ORC4O43929 436 aa12.73□□□□□ -0.37
CMSS1-208ENST00000496116 TOB1P50616 345 aaPredicted RBP12.73□□□□□ -0.37
CMSS1-208ENST00000496116 ARHGEF1Q92888 912 aaKnown RBP12.73□□□□□ -0.37
CMSS1-208ENST00000496116 BRMS1Q9HCU9 246 aa12.73□□□□□ -0.37
CMSS1-208ENST00000496116 DCP1AQ9NPI6 582 aaPredicted RBP12.73□□□□□ -0.37
CMSS1-208ENST00000496116 CYP2D7A0A087X1C5 515 aa12.72□□□□□ -0.37
CMSS1-208ENST00000496116 PRDM1O75626 825 aa12.72□□□□□ -0.37
CMSS1-208ENST00000496116 PTPREP23469 700 aa12.72□□□□□ -0.37
CMSS1-208ENST00000496116 RFC4P35249 363 aa12.72□□□□□ -0.37
CMSS1-208ENST00000496116 NT5C2P49902 561 aa12.72□□□□□ -0.37
CMSS1-208ENST00000496116 PDE4BQ07343 736 aa12.72□□□□□ -0.37
CMSS1-208ENST00000496116 NR5A1Q13285 461 aa12.72□□□□□ -0.37
CMSS1-208ENST00000496116 OLFM4Q6UX06 510 aa12.72□□□□□ -0.37
CMSS1-208ENST00000496116 FILIP1Q7Z7B0 1213 aa12.72□□□□□ -0.37
CMSS1-208ENST00000496116 ZNF579Q8NAF0 562 aaKnown RBP12.72□□□□□ -0.37
CMSS1-208ENST00000496116 THSD7AQ9UPZ6 1657 aa12.72□□□□□ -0.37
CMSS1-208ENST00000496116 UBAP1LF5GYI3 381 aa12.71□□□□□ -0.37
CMSS1-208ENST00000496116 SMC2O95347 1197 aa12.71□□□□□ -0.37
CMSS1-208ENST00000496116 PRDX5P30044 214 aa12.71□□□□□ -0.37
CMSS1-208ENST00000496116 GTF2F1P35269 517 aaKnown RBP eCLIP12.71□□□□□ -0.37
CMSS1-208ENST00000496116 KRT2P35908 639 aa12.71□□□□□ -0.37
CMSS1-208ENST00000496116 TROAPQ12815 778 aa12.71□□□□□ -0.37
CMSS1-208ENST00000496116 PNOCQ13519 176 aa12.71□□□□□ -0.37
CMSS1-208ENST00000496116 TRAPPC3LQ5T215 181 aa12.71□□□□□ -0.37
CMSS1-208ENST00000496116 DZIP1Q86YF9 867 aaKnown RBP12.71□□□□□ -0.37
CMSS1-208ENST00000496116 CTCFLQ8NI51 663 aaPredicted RBP12.71□□□□□ -0.37
CMSS1-208ENST00000496116 CABP5Q9NP86 173 aa12.71□□□□□ -0.37
CMSS1-208ENST00000496116 FBXO2Q9UK22 296 aaPredicted RBP12.71□□□□□ -0.37
CMSS1-208ENST00000496116 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.71□□□□□ -0.37
CMSS1-208ENST00000496116 TAF1LQ8IZX4 1826 aa12.71□□□□□ -0.37
CMSS1-208ENST00000496116 TM4SF1P30408 202 aa12.71□□□□□ -0.38
CMSS1-208ENST00000496116 LONRF3Q496Y0 759 aa12.71□□□□□ -0.38
CMSS1-208ENST00000496116 SBK1Q52WX2 424 aa12.71□□□□□ -0.38
CMSS1-208ENST00000496116 MTERF4Q7Z6M4 381 aaKnown RBP12.71□□□□□ -0.38
CMSS1-208ENST00000496116 METTL16Q86W50 562 aaKnown RBP12.71□□□□□ -0.38
CMSS1-208ENST00000496116 CCDC34Q96HJ3 373 aa12.71□□□□□ -0.38
CMSS1-208ENST00000496116 MAP7D2Q96T17 732 aa12.71□□□□□ -0.38
CMSS1-208ENST00000496116 ANKIB1Q9P2G1 1089 aa12.71□□□□□ -0.38
CMSS1-208ENST00000496116 LEMD3Q9Y2U8 911 aa12.71□□□□□ -0.38
CMSS1-208ENST00000496116 PCDHB6Q9Y5E3 794 aa12.71□□□□□ -0.38
CMSS1-208ENST00000496116 SRPRBQ9Y5M8 271 aaKnown RBP12.71□□□□□ -0.38
CMSS1-208ENST00000496116 MORC2Q9Y6X9 1032 aaPredicted RBP12.71□□□□□ -0.38
CMSS1-208ENST00000496116 LY75O60449 1722 aa12.71□□□□□ -0.38
CMSS1-208ENST00000496116 SMIM22K7EJ46 135 aa12.7□□□□□ -0.38
CMSS1-208ENST00000496116 MYO1BO43795 1136 aa12.7□□□□□ -0.38
CMSS1-208ENST00000496116 BMP15O95972 392 aa12.7□□□□□ -0.38
CMSS1-208ENST00000496116 MYL5Q02045 173 aa12.7□□□□□ -0.38
CMSS1-208ENST00000496116 NCAPHQ15003 741 aa12.7□□□□□ -0.38
CMSS1-208ENST00000496116 PKN1Q16512 942 aa12.7□□□□□ -0.38
CMSS1-208ENST00000496116 KANK3Q6NY19 840 aa12.7□□□□□ -0.38
CMSS1-208ENST00000496116 CCDC24Q8N4L8 307 aa12.7□□□□□ -0.38
CMSS1-208ENST00000496116 WDR66Q8TBY9 1149 aa12.7□□□□□ -0.38
CMSS1-208ENST00000496116 PHF20Q9BVI0 1012 aa12.7□□□□□ -0.38
CMSS1-208ENST00000496116 OSBPL5Q9H0X9 879 aaPredicted RBP12.7□□□□□ -0.38
CMSS1-208ENST00000496116 VPS54Q9P1Q0 977 aa12.7□□□□□ -0.38
CMSS1-208ENST00000496116 KIAA1551Q9HCM1 1747 aa12.7□□□□□ -0.38
CMSS1-208ENST00000496116 SPATA31A6Q5VVP1 1343 aa12.7□□□□□ -0.38
CMSS1-208ENST00000496116 NRDCO43847 1150 aa12.7□□□□□ -0.38
CMSS1-208ENST00000496116 SKILP12757 684 aa12.7□□□□□ -0.38
CMSS1-208ENST00000496116 FUT2Q10981 343 aa12.7□□□□□ -0.38
CMSS1-208ENST00000496116 GRAPQ13588 217 aa12.7□□□□□ -0.38
CMSS1-208ENST00000496116 TPD52L1Q16890 204 aaPredicted RBP12.7□□□□□ -0.38
CMSS1-208ENST00000496116 ISM2Q6H9L7 571 aa12.7□□□□□ -0.38
CMSS1-208ENST00000496116 TMTC3Q6ZXV5 915 aa12.7□□□□□ -0.38
CMSS1-208ENST00000496116 GRAPLQ8TC17 118 aaPredicted RBP12.7□□□□□ -0.38
CMSS1-208ENST00000496116 OXER1Q8TDS5 423 aa12.7□□□□□ -0.38
CMSS1-208ENST00000496116 XPO4Q9C0E2 1151 aaKnown RBP12.7□□□□□ -0.38
CMSS1-208ENST00000496116 PDCL3Q9H2J4 239 aa12.7□□□□□ -0.38
CMSS1-208ENST00000496116 IFNKQ9P0W0 207 aa12.7□□□□□ -0.38
CMSS1-208ENST00000496116 V9GY48 417 aaPredicted RBP12.7□□□□□ -0.38
CMSS1-208ENST00000496116 TRIM75PA6NK02 468 aa12.69□□□□□ -0.38
CMSS1-208ENST00000496116 TSPY2A6NKD2 308 aa12.69□□□□□ -0.38
CMSS1-208ENST00000496116 CBFA2T2O43439 604 aa12.69□□□□□ -0.38
CMSS1-208ENST00000496116 PLEKHA8P1O95397 391 aa12.69□□□□□ -0.38
CMSS1-208ENST00000496116 POSTNQ15063 836 aa12.69□□□□□ -0.38
CMSS1-208ENST00000496116 CCDC150Q8NCX0 1101 aa12.69□□□□□ -0.38
CMSS1-208ENST00000496116 C16orf45Q96MC5 204 aaPredicted RBP12.69□□□□□ -0.38
CMSS1-208ENST00000496116 MCM9Q9NXL9 1143 aa12.69□□□□□ -0.38
CMSS1-208ENST00000496116 PCDHA5Q9Y5H7 936 aa12.69□□□□□ -0.38
CMSS1-208ENST00000496116 IRS2Q9Y4H2 1338 aa12.68□□□□□ -0.38
CMSS1-208ENST00000496116 POLR2DO15514 142 aaKnown RBP12.68□□□□□ -0.38
CMSS1-208ENST00000496116 LDHBP07195 334 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms