RNA–Protein interactions for RNA: ENST00000495988.1

APOBEC3A-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 4

Gene APOBEC3A, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-204ENST00000495988 GINM1Q9NU53 330 aa20.6■□□□□ 0.89
APOBEC3A-204ENST00000495988 BIN2Q9UBW5 565 aaPredicted RBP20.6■□□□□ 0.89
APOBEC3A-204ENST00000495988 ZBTB21Q9ULJ3 1066 aa20.6■□□□□ 0.89
APOBEC3A-204ENST00000495988 BACE1P56817 501 aa20.59■□□□□ 0.89
APOBEC3A-204ENST00000495988 SHROOM1Q2M3G4 852 aaPredicted RBP20.59■□□□□ 0.89
APOBEC3A-204ENST00000495988 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.59■□□□□ 0.89
APOBEC3A-204ENST00000495988 DNAJC2Q99543 621 aaKnown RBP20.59■□□□□ 0.89
APOBEC3A-204ENST00000495988 ASCC2Q9H1I8 757 aaPredicted RBP20.59■□□□□ 0.89
APOBEC3A-204ENST00000495988 TMOD4Q9NZQ9 345 aa20.59■□□□□ 0.89
APOBEC3A-204ENST00000495988 SLC34A2O95436 690 aa20.58■□□□□ 0.89
APOBEC3A-204ENST00000495988 GCLCP48506 637 aaPredicted RBP20.58■□□□□ 0.89
APOBEC3A-204ENST00000495988 FLT3LGP49771 235 aa20.58■□□□□ 0.89
APOBEC3A-204ENST00000495988 UBXN2AP68543 259 aa20.58■□□□□ 0.89
APOBEC3A-204ENST00000495988 SLC9C2Q5TAH2 1124 aa20.58■□□□□ 0.89
APOBEC3A-204ENST00000495988 SLAIN1Q8ND83 568 aa20.58■□□□□ 0.89
APOBEC3A-204ENST00000495988 MAGEB6P1A0A0J9YX57 407 aa20.57■□□□□ 0.88
APOBEC3A-204ENST00000495988 C19orf81C9J6K1 198 aa20.57■□□□□ 0.88
APOBEC3A-204ENST00000495988 USP17L10C9JJH3 530 aa20.57■□□□□ 0.88
APOBEC3A-204ENST00000495988 GOLIM4O00461 696 aa20.57■□□□□ 0.88
APOBEC3A-204ENST00000495988 PDE6AP16499 860 aa20.57■□□□□ 0.88
APOBEC3A-204ENST00000495988 C20orf194Q5TEA3 1177 aa20.57■□□□□ 0.88
APOBEC3A-204ENST00000495988 TTC6Q86TZ1 520 aa20.57■□□□□ 0.88
APOBEC3A-204ENST00000495988 COA7Q96BR5 231 aa20.57■□□□□ 0.88
APOBEC3A-204ENST00000495988 RIOK1Q9BRS2 568 aaKnown RBP20.57■□□□□ 0.88
APOBEC3A-204ENST00000495988 SERPINB13Q9UIV8 391 aa20.57■□□□□ 0.88
APOBEC3A-204ENST00000495988 ADCY3O60266 1144 aa20.56■□□□□ 0.88
APOBEC3A-204ENST00000495988 CCL5P13501 91 aa20.56■□□□□ 0.88
APOBEC3A-204ENST00000495988 IRX3P78415 501 aaPredicted RBP20.56■□□□□ 0.88
APOBEC3A-204ENST00000495988 PDE3AQ14432 1141 aa20.56■□□□□ 0.88
APOBEC3A-204ENST00000495988 EHD4Q9H223 541 aa20.56■□□□□ 0.88
APOBEC3A-204ENST00000495988 ZNF532Q9HCE3 1301 aa20.55■□□□□ 0.88
APOBEC3A-204ENST00000495988 MKI67P46013 3256 aaKnown RBP20.55■□□□□ 0.88
APOBEC3A-204ENST00000495988 GH2P01242 217 aa20.55■□□□□ 0.88
APOBEC3A-204ENST00000495988 TATDN1Q6P1N9 297 aa20.55■□□□□ 0.88
APOBEC3A-204ENST00000495988 NKX2-3Q8TAU0 364 aa20.55■□□□□ 0.88
APOBEC3A-204ENST00000495988 CRNKL1Q9BZJ0 848 aaKnown RBP20.55■□□□□ 0.88
APOBEC3A-204ENST00000495988 RNF208Q9H0X6 261 aa20.55■□□□□ 0.88
APOBEC3A-204ENST00000495988 TAOK2Q9UL54 1235 aa20.55■□□□□ 0.88
APOBEC3A-204ENST00000495988 NAV1Q8NEY1 1877 aa20.54■□□□□ 0.88
APOBEC3A-204ENST00000495988 ELNP15502 786 aa20.54■□□□□ 0.88
APOBEC3A-204ENST00000495988 HOXA7P31268 230 aaPredicted RBP20.54■□□□□ 0.88
APOBEC3A-204ENST00000495988 IRF5Q13568 498 aa20.54■□□□□ 0.88
APOBEC3A-204ENST00000495988 PXYLP1Q8TE99 480 aa20.54■□□□□ 0.88
APOBEC3A-204ENST00000495988 SHISA4Q96DD7 197 aa20.54■□□□□ 0.88
APOBEC3A-204ENST00000495988 EDC3Q96F86 508 aaKnown RBP20.54■□□□□ 0.88
APOBEC3A-204ENST00000495988 DDX60LQ5H9U9 1706 aaKnown RBP20.53■□□□□ 0.88
APOBEC3A-204ENST00000495988 DOCK3Q8IZD9 2030 aa20.53■□□□□ 0.88
APOBEC3A-204ENST00000495988 POLR3DP05423 398 aaPredicted RBP20.53■□□□□ 0.88
APOBEC3A-204ENST00000495988 GJB1P08034 283 aa20.53■□□□□ 0.88
APOBEC3A-204ENST00000495988 PLCD1P51178 756 aa20.53■□□□□ 0.88
APOBEC3A-204ENST00000495988 BOLA2Q9H3K6 86 aa20.53■□□□□ 0.88
APOBEC3A-204ENST00000495988 PAG1Q9NWQ8 432 aa20.53■□□□□ 0.88
APOBEC3A-204ENST00000495988 TCRBV5S4A2TA0A5A2 114 aa20.52■□□□□ 0.88
APOBEC3A-204ENST00000495988 INHAP05111 366 aa20.52■□□□□ 0.88
APOBEC3A-204ENST00000495988 ATP5JP18859 108 aa20.52■□□□□ 0.88
APOBEC3A-204ENST00000495988 GJA8P48165 433 aa20.52■□□□□ 0.88
APOBEC3A-204ENST00000495988 CERKLQ49MI3 558 aaPredicted RBP20.52■□□□□ 0.88
APOBEC3A-204ENST00000495988 USP17L2Q6R6M4 530 aa20.52■□□□□ 0.88
APOBEC3A-204ENST00000495988 P2RX7Q99572 595 aaKnown RBP20.52■□□□□ 0.88
APOBEC3A-204ENST00000495988 FEZ1Q99689 392 aa20.52■□□□□ 0.88
APOBEC3A-204ENST00000495988 LRRCC1Q9C099 1032 aa20.52■□□□□ 0.88
APOBEC3A-204ENST00000495988 UNC93B1Q9H1C4 597 aa20.52■□□□□ 0.88
APOBEC3A-204ENST00000495988 MORF4L1Q9UBU8 362 aa20.52■□□□□ 0.88
APOBEC3A-204ENST00000495988 HERVK_113P62684 666 aa20.51■□□□□ 0.87
APOBEC3A-204ENST00000495988 RAB3GAP1Q15042 981 aa20.51■□□□□ 0.87
APOBEC3A-204ENST00000495988 ABCB5Q2M3G0 1257 aa20.51■□□□□ 0.87
APOBEC3A-204ENST00000495988 LCORLQ8N3X6 602 aa20.51■□□□□ 0.87
APOBEC3A-204ENST00000495988 GCC1Q96CN9 775 aa20.51■□□□□ 0.87
APOBEC3A-204ENST00000495988 CABP5Q9NP86 173 aa20.51■□□□□ 0.87
APOBEC3A-204ENST00000495988 EMILIN3Q9NT22 766 aa20.51■□□□□ 0.87
APOBEC3A-204ENST00000495988 MCM9Q9NXL9 1143 aa20.51■□□□□ 0.87
APOBEC3A-204ENST00000495988 SHMT1P34896 483 aa20.5■□□□□ 0.87
APOBEC3A-204ENST00000495988 ZYXQ15942 572 aaKnown RBP20.5■□□□□ 0.87
APOBEC3A-204ENST00000495988 U2AF1L4Q8WU68 220 aaKnown RBP20.5■□□□□ 0.87
APOBEC3A-204ENST00000495988 SDR42E1Q8WUS8 393 aa20.5■□□□□ 0.87
APOBEC3A-204ENST00000495988 ARMT1Q9H993 441 aa20.5■□□□□ 0.87
APOBEC3A-204ENST00000495988 ADD2P35612 726 aa20.49■□□□□ 0.87
APOBEC3A-204ENST00000495988 GPRC5AQ8NFJ5 357 aa20.49■□□□□ 0.87
APOBEC3A-204ENST00000495988 HAUS7Q99871 368 aa20.49■□□□□ 0.87
APOBEC3A-204ENST00000495988 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.49■□□□□ 0.87
APOBEC3A-204ENST00000495988 DCP1AQ9NPI6 582 aaPredicted RBP20.49■□□□□ 0.87
APOBEC3A-204ENST00000495988 SMARCA5O60264 1052 aaPredicted RBP20.48■□□□□ 0.87
APOBEC3A-204ENST00000495988 PEX10O60683 326 aa20.48■□□□□ 0.87
APOBEC3A-204ENST00000495988 USP14P54578 494 aa20.48■□□□□ 0.87
APOBEC3A-204ENST00000495988 GABPAQ06546 454 aa20.48■□□□□ 0.87
APOBEC3A-204ENST00000495988 C12orf42Q96LP6 360 aa20.48■□□□□ 0.87
APOBEC3A-204ENST00000495988 TXNRD2Q9NNW7 524 aa20.48■□□□□ 0.87
APOBEC3A-204ENST00000495988 MBD4O95243 580 aa20.47■□□□□ 0.87
APOBEC3A-204ENST00000495988 SGPL1O95470 568 aa20.47■□□□□ 0.87
APOBEC3A-204ENST00000495988 EVX2Q03828 476 aa20.47■□□□□ 0.87
APOBEC3A-204ENST00000495988 SLFNL1Q499Z3 407 aa20.47■□□□□ 0.87
APOBEC3A-204ENST00000495988 GTF3C2Q8WUA4 911 aaPredicted RBP20.47■□□□□ 0.87
APOBEC3A-204ENST00000495988 PAGR1Q9BTK6 254 aa20.47■□□□□ 0.87
APOBEC3A-204ENST00000495988 KIAA1683Q9H0B3 1180 aa20.47■□□□□ 0.87
APOBEC3A-204ENST00000495988 RBPJLQ9UBG7 517 aa20.47■□□□□ 0.87
APOBEC3A-204ENST00000495988 GJD2Q9UKL4 321 aa20.47■□□□□ 0.87
APOBEC3A-204ENST00000495988 MPHOSPH10O00566 681 aaKnown RBP20.46■□□□□ 0.87
APOBEC3A-204ENST00000495988 HMGCRP04035 888 aa20.46■□□□□ 0.87
APOBEC3A-204ENST00000495988 ACER1Q8TDN7 264 aa20.46■□□□□ 0.87
APOBEC3A-204ENST00000495988 DEFB118Q96PH6 123 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms