RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 MAP3K10Q02779 954 aa13.02□□□□□ -0.33
RFTN1-211ENST00000495666 EVX2Q03828 476 aa13.02□□□□□ -0.33
RFTN1-211ENST00000495666 ASCC2Q9H1I8 757 aaPredicted RBP13.02□□□□□ -0.33
RFTN1-211ENST00000495666 DHX36Q9H2U1 1008 aaKnown RBP13.02□□□□□ -0.33
RFTN1-211ENST00000495666 BOLA2Q9H3K6 86 aa13.02□□□□□ -0.33
RFTN1-211ENST00000495666 HERC5Q9UII4 1024 aaKnown RBP13.02□□□□□ -0.33
RFTN1-211ENST00000495666 ZBTB21Q9ULJ3 1066 aa13.02□□□□□ -0.33
RFTN1-211ENST00000495666 MAGEB6P1A0A0J9YX57 407 aa13.01□□□□□ -0.33
RFTN1-211ENST00000495666 GNRH1P01148 92 aa13.01□□□□□ -0.33
RFTN1-211ENST00000495666 POLR3DP05423 398 aaPredicted RBP13.01□□□□□ -0.33
RFTN1-211ENST00000495666 PPP4CP60510 307 aa13.01□□□□□ -0.33
RFTN1-211ENST00000495666 UBXN2AP68543 259 aa13.01□□□□□ -0.33
RFTN1-211ENST00000495666 HSP90AB4PQ58FF6 505 aa13.01□□□□□ -0.33
RFTN1-211ENST00000495666 SLC9C2Q5TAH2 1124 aa13.01□□□□□ -0.33
RFTN1-211ENST00000495666 SAMD1Q6SPF0 538 aaPredicted RBP13.01□□□□□ -0.33
RFTN1-211ENST00000495666 SIRT2Q8IXJ6 389 aa13.01□□□□□ -0.33
RFTN1-211ENST00000495666 SDR42E1Q8WUS8 393 aa13.01□□□□□ -0.33
RFTN1-211ENST00000495666 COA7Q96BR5 231 aa13.01□□□□□ -0.33
RFTN1-211ENST00000495666 UNC93B1Q9H1C4 597 aa13.01□□□□□ -0.33
RFTN1-211ENST00000495666 CWC22Q9HCG8 908 aaKnown RBP13.01□□□□□ -0.33
RFTN1-211ENST00000495666 MYH7P12883 1935 aa13.01□□□□□ -0.33
RFTN1-211ENST00000495666 ZNF532Q9HCE3 1301 aa13□□□□□ -0.33
RFTN1-211ENST00000495666 ZBTB22O15209 634 aa13□□□□□ -0.33
RFTN1-211ENST00000495666 NPM3O75607 178 aaKnown RBP13□□□□□ -0.33
RFTN1-211ENST00000495666 MAP4K4O95819 1239 aaPredicted RBP13□□□□□ -0.33
RFTN1-211ENST00000495666 CHGBP05060 677 aa13□□□□□ -0.33
RFTN1-211ENST00000495666 INHAP05111 366 aa13□□□□□ -0.33
RFTN1-211ENST00000495666 ASNSP08243 561 aa13□□□□□ -0.33
RFTN1-211ENST00000495666 PDE6AP16499 860 aa13□□□□□ -0.33
RFTN1-211ENST00000495666 PRMT2P55345 433 aa13□□□□□ -0.33
RFTN1-211ENST00000495666 PABPC4Q13310 644 aaKnown RBP eCLIP13□□□□□ -0.33
RFTN1-211ENST00000495666 WDR78Q5VTH9 848 aa13□□□□□ -0.33
RFTN1-211ENST00000495666 CCAR1Q8IX12 1150 aaKnown RBP13□□□□□ -0.33
RFTN1-211ENST00000495666 PROCA1Q8NCQ7 364 aaPredicted RBP13□□□□□ -0.33
RFTN1-211ENST00000495666 KIF1BPQ96EK5 621 aa13□□□□□ -0.33
RFTN1-211ENST00000495666 ZNF512BQ96KM6 892 aaPredicted RBP13□□□□□ -0.33
RFTN1-211ENST00000495666 YTHDC1Q96MU7 727 aaKnown RBP13□□□□□ -0.33
RFTN1-211ENST00000495666 ARMT1Q9H993 441 aa13□□□□□ -0.33
RFTN1-211ENST00000495666 DDX60LQ5H9U9 1706 aaKnown RBP12.99□□□□□ -0.33
RFTN1-211ENST00000495666 CYP2D6P10635 497 aa12.99□□□□□ -0.33
RFTN1-211ENST00000495666 TSHZ3Q63HK5 1081 aa12.99□□□□□ -0.33
RFTN1-211ENST00000495666 STK11IPQ8N1F8 1099 aa12.99□□□□□ -0.33
RFTN1-211ENST00000495666 LCORLQ8N3X6 602 aa12.99□□□□□ -0.33
RFTN1-211ENST00000495666 SLAIN1Q8ND83 568 aa12.99□□□□□ -0.33
RFTN1-211ENST00000495666 DPF3Q92784 378 aa12.99□□□□□ -0.33
RFTN1-211ENST00000495666 SHISA4Q96DD7 197 aa12.99□□□□□ -0.33
RFTN1-211ENST00000495666 MCM9Q9NXL9 1143 aa12.99□□□□□ -0.33
RFTN1-211ENST00000495666 USP17L10C9JJH3 530 aa12.98□□□□□ -0.33
RFTN1-211ENST00000495666 CYP2B6P20813 491 aa12.98□□□□□ -0.33
RFTN1-211ENST00000495666 PLCD1P51178 756 aa12.98□□□□□ -0.33
RFTN1-211ENST00000495666 BACE1P56817 501 aa12.98□□□□□ -0.33
RFTN1-211ENST00000495666 CERKLQ49MI3 558 aaPredicted RBP12.98□□□□□ -0.33
RFTN1-211ENST00000495666 FOXP4Q8IVH2 680 aaPredicted RBP12.98□□□□□ -0.33
RFTN1-211ENST00000495666 SLC44A5Q8NCS7 719 aa12.98□□□□□ -0.33
RFTN1-211ENST00000495666 DEFB118Q96PH6 123 aa12.98□□□□□ -0.33
RFTN1-211ENST00000495666 P2RX7Q99572 595 aaKnown RBP12.98□□□□□ -0.33
RFTN1-211ENST00000495666 CRNKL1Q9BZJ0 848 aaKnown RBP12.98□□□□□ -0.33
RFTN1-211ENST00000495666 ZBTB40Q9NUA8 1239 aa12.98□□□□□ -0.33
RFTN1-211ENST00000495666 SLC45A1Q9Y2W3 748 aa12.98□□□□□ -0.33
RFTN1-211ENST00000495666 CEP290O15078 2479 aa12.97□□□□□ -0.33
RFTN1-211ENST00000495666 PRKAB2O43741 272 aa12.97□□□□□ -0.33
RFTN1-211ENST00000495666 MBD4O95243 580 aa12.97□□□□□ -0.33
RFTN1-211ENST00000495666 SLC34A2O95436 690 aa12.97□□□□□ -0.33
RFTN1-211ENST00000495666 TFRCP02786 760 aaKnown RBP12.97□□□□□ -0.33
RFTN1-211ENST00000495666 TRIM32Q13049 653 aa12.97□□□□□ -0.33
RFTN1-211ENST00000495666 TTF1Q15361 905 aaPredicted RBP12.97□□□□□ -0.33
RFTN1-211ENST00000495666 FAM110CQ1W6H9 321 aa12.97□□□□□ -0.33
RFTN1-211ENST00000495666 ABCB5Q2M3G0 1257 aa12.97□□□□□ -0.33
RFTN1-211ENST00000495666 CLEC10AQ8IUN9 316 aa12.97□□□□□ -0.33
RFTN1-211ENST00000495666 RPAP2Q8IXW5 612 aaPredicted RBP12.97□□□□□ -0.33
RFTN1-211ENST00000495666 ACER1Q8TDN7 264 aa12.97□□□□□ -0.33
RFTN1-211ENST00000495666 PAG1Q9NWQ8 432 aa12.97□□□□□ -0.33
RFTN1-211ENST00000495666 SERPINB13Q9UIV8 391 aa12.97□□□□□ -0.33
RFTN1-211ENST00000495666 PLXNB2O15031 1838 aa12.97□□□□□ -0.33
RFTN1-211ENST00000495666 CYP2D7A0A087X1C5 515 aa12.96□□□□□ -0.33
RFTN1-211ENST00000495666 RAD21O60216 631 aa12.96□□□□□ -0.33
RFTN1-211ENST00000495666 HERVK_113P62684 666 aa12.96□□□□□ -0.33
RFTN1-211ENST00000495666 ATP2B2Q01814 1243 aa12.96□□□□□ -0.33
RFTN1-211ENST00000495666 TTC6Q86TZ1 520 aa12.96□□□□□ -0.33
RFTN1-211ENST00000495666 U2AF1L4Q8WU68 220 aaKnown RBP12.96□□□□□ -0.33
RFTN1-211ENST00000495666 DYNLL2Q96FJ2 89 aa12.96□□□□□ -0.33
RFTN1-211ENST00000495666 RIOK1Q9BRS2 568 aaKnown RBP12.96□□□□□ -0.33
RFTN1-211ENST00000495666 TXNRD2Q9NNW7 524 aa12.96□□□□□ -0.33
RFTN1-211ENST00000495666 CABP5Q9NP86 173 aa12.96□□□□□ -0.33
RFTN1-211ENST00000495666 H0YGN5 161 aa12.95□□□□□ -0.34
RFTN1-211ENST00000495666 SMIM22K7EJ46 135 aa12.95□□□□□ -0.34
RFTN1-211ENST00000495666 RAB11FIP3O75154 756 aa12.95□□□□□ -0.34
RFTN1-211ENST00000495666 FARP2O94887 1054 aaPredicted RBP12.95□□□□□ -0.34
RFTN1-211ENST00000495666 SHMT1P34896 483 aa12.95□□□□□ -0.34
RFTN1-211ENST00000495666 GCLCP48506 637 aaPredicted RBP12.95□□□□□ -0.34
RFTN1-211ENST00000495666 SEPT2Q15019 361 aa12.95□□□□□ -0.34
RFTN1-211ENST00000495666 SH3D19Q5HYK7 790 aa12.95□□□□□ -0.34
RFTN1-211ENST00000495666 USP17L2Q6R6M4 530 aa12.95□□□□□ -0.34
RFTN1-211ENST00000495666 WDR18Q9BV38 432 aa12.95□□□□□ -0.34
RFTN1-211ENST00000495666 TBC1D2Q9BYX2 928 aa12.95□□□□□ -0.34
RFTN1-211ENST00000495666 LRRCC1Q9C099 1032 aa12.95□□□□□ -0.34
RFTN1-211ENST00000495666 EMILIN3Q9NT22 766 aa12.95□□□□□ -0.34
RFTN1-211ENST00000495666 PCDH10Q9P2E7 1040 aa12.95□□□□□ -0.34
RFTN1-211ENST00000495666 GJB1P08034 283 aa12.94□□□□□ -0.34
RFTN1-211ENST00000495666 PDE3AQ14432 1141 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms