RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 MYH13Q9UKX3 1938 aa17.64■□□□□ 0.41
CALD1-222ENST00000495522 SMC2O95347 1197 aa17.63■□□□□ 0.41
CALD1-222ENST00000495522 SKILP12757 684 aa17.63■□□□□ 0.41
CALD1-222ENST00000495522 PTPREP23469 700 aa17.63■□□□□ 0.41
CALD1-222ENST00000495522 KLRK1P26718 216 aa17.63■□□□□ 0.41
CALD1-222ENST00000495522 HIBADHP31937 336 aaKnown RBP17.63■□□□□ 0.41
CALD1-222ENST00000495522 NR5A1Q13285 461 aa17.63■□□□□ 0.41
CALD1-222ENST00000495522 LONRF3Q496Y0 759 aa17.63■□□□□ 0.41
CALD1-222ENST00000495522 METTL16Q86W50 562 aaKnown RBP17.63■□□□□ 0.41
CALD1-222ENST00000495522 C16orf45Q96MC5 204 aaPredicted RBP17.63■□□□□ 0.41
CALD1-222ENST00000495522 XPO4Q9C0E2 1151 aaKnown RBP17.63■□□□□ 0.41
CALD1-222ENST00000495522 RBM28Q9NW13 759 aaKnown RBP17.63■□□□□ 0.41
CALD1-222ENST00000495522 IFNKQ9P0W0 207 aa17.63■□□□□ 0.41
CALD1-222ENST00000495522 HOOK1Q9UJC3 728 aaKnown RBP17.63■□□□□ 0.41
CALD1-222ENST00000495522 FBXO2Q9UK22 296 aaPredicted RBP17.63■□□□□ 0.41
CALD1-222ENST00000495522 MYH6P13533 1939 aa17.63■□□□□ 0.41
CALD1-222ENST00000495522 MYH2Q9UKX2 1941 aa17.63■□□□□ 0.41
CALD1-222ENST00000495522 CALM1P0DP23 149 aa17.63■□□□□ 0.41
CALD1-222ENST00000495522 CALM2P0DP24 149 aa17.63■□□□□ 0.41
CALD1-222ENST00000495522 CALM3P0DP25 149 aa17.63■□□□□ 0.41
CALD1-222ENST00000495522 MECOMQ03112 1051 aa17.63■□□□□ 0.41
CALD1-222ENST00000495522 TPD52L1Q16890 204 aaPredicted RBP17.63■□□□□ 0.41
CALD1-222ENST00000495522 DLEC1Q9Y238 1755 aa17.62■□□□□ 0.41
CALD1-222ENST00000495522 GNPATO15228 680 aa17.62■□□□□ 0.41
CALD1-222ENST00000495522 CCZ1BP86790 482 aa17.62■□□□□ 0.41
CALD1-222ENST00000495522 CCZ1P86791 482 aaPredicted RBP17.62■□□□□ 0.41
CALD1-222ENST00000495522 ISM2Q6H9L7 571 aa17.62■□□□□ 0.41
CALD1-222ENST00000495522 TMED8Q6PL24 325 aaPredicted RBP17.62■□□□□ 0.41
CALD1-222ENST00000495522 TPTE2Q6XPS3 522 aa17.62■□□□□ 0.41
CALD1-222ENST00000495522 PTF1AQ7RTS3 328 aa17.62■□□□□ 0.41
CALD1-222ENST00000495522 CRNKL1Q9BZJ0 848 aaKnown RBP17.62■□□□□ 0.41
CALD1-222ENST00000495522 AFF2P51816 1311 aa17.62■□□□□ 0.41
CALD1-222ENST00000495522 USP17L12C9JPN9 530 aa17.62■□□□□ 0.41
CALD1-222ENST00000495522 USP17L21D6R901 530 aa17.62■□□□□ 0.41
CALD1-222ENST00000495522 RIOK3O14730 519 aaKnown RBP17.62■□□□□ 0.41
CALD1-222ENST00000495522 PRPF3O43395 683 aaKnown RBP17.62■□□□□ 0.41
CALD1-222ENST00000495522 PRDM1O75626 825 aa17.62■□□□□ 0.41
CALD1-222ENST00000495522 OLFM4Q6UX06 510 aa17.62■□□□□ 0.41
CALD1-222ENST00000495522 ZNF579Q8NAF0 562 aaKnown RBP17.62■□□□□ 0.41
CALD1-222ENST00000495522 OXER1Q8TDS5 423 aa17.62■□□□□ 0.41
CALD1-222ENST00000495522 TFCP2L1Q9NZI6 479 aa17.62■□□□□ 0.41
CALD1-222ENST00000495522 PCDHB6Q9Y5E3 794 aa17.62■□□□□ 0.41
CALD1-222ENST00000495522 BTAF1O14981 1849 aa17.61■□□□□ 0.41
CALD1-222ENST00000495522 DDAH1O94760 285 aa17.61■□□□□ 0.41
CALD1-222ENST00000495522 TNNT1P13805 278 aa17.61■□□□□ 0.41
CALD1-222ENST00000495522 MYL5Q02045 173 aa17.61■□□□□ 0.41
CALD1-222ENST00000495522 FUT2Q10981 343 aa17.61■□□□□ 0.41
CALD1-222ENST00000495522 DHX8Q14562 1220 aaKnown RBP17.61■□□□□ 0.41
CALD1-222ENST00000495522 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.61■□□□□ 0.41
CALD1-222ENST00000495522 MAST2Q6P0Q8 1798 aa17.61■□□□□ 0.41
CALD1-222ENST00000495522 ORC4O43929 436 aa17.6■□□□□ 0.41
CALD1-222ENST00000495522 PKN1Q16512 942 aa17.6■□□□□ 0.41
CALD1-222ENST00000495522 SPECC1Q5M775 1068 aa17.6■□□□□ 0.41
CALD1-222ENST00000495522 CCDC150Q8NCX0 1101 aa17.6■□□□□ 0.41
CALD1-222ENST00000495522 NOL10Q9BSC4 688 aaKnown RBP17.6■□□□□ 0.41
CALD1-222ENST00000495522 CABP5Q9NP86 173 aa17.6■□□□□ 0.41
CALD1-222ENST00000495522 ATP8A2Q9NTI2 1148 aa17.6■□□□□ 0.41
CALD1-222ENST00000495522 AATFQ9NY61 560 aaKnown RBP eCLIP17.6■□□□□ 0.41
CALD1-222ENST00000495522 RTCBQ9Y3I0 505 aaKnown RBP17.6■□□□□ 0.41
CALD1-222ENST00000495522 SRPRBQ9Y5M8 271 aaKnown RBP17.6■□□□□ 0.41
CALD1-222ENST00000495522 MORC2Q9Y6X9 1032 aaPredicted RBP17.6■□□□□ 0.41
CALD1-222ENST00000495522 LMOD1P29536 600 aaPredicted RBP17.6■□□□□ 0.41
CALD1-222ENST00000495522 KRT2P35908 639 aa17.6■□□□□ 0.41
CALD1-222ENST00000495522 FANCCQ00597 558 aa17.6■□□□□ 0.41
CALD1-222ENST00000495522 TROAPQ12815 778 aa17.6■□□□□ 0.41
CALD1-222ENST00000495522 TMC6Q7Z403 805 aa17.6■□□□□ 0.41
CALD1-222ENST00000495522 PHF20Q9BVI0 1012 aa17.6■□□□□ 0.41
CALD1-222ENST00000495522 DCP1AQ9NPI6 582 aaPredicted RBP17.6■□□□□ 0.41
CALD1-222ENST00000495522 VPS54Q9P1Q0 977 aa17.6■□□□□ 0.41
CALD1-222ENST00000495522 PCDHA5Q9Y5H7 936 aa17.6■□□□□ 0.41
CALD1-222ENST00000495522 LAMB1P07942 1786 aa17.6■□□□□ 0.41
CALD1-222ENST00000495522 MYO1BO43795 1136 aa17.59■□□□□ 0.41
CALD1-222ENST00000495522 MDM2Q00987 491 aaPredicted RBP17.59■□□□□ 0.41
CALD1-222ENST00000495522 GRIN1Q05586 938 aa17.59■□□□□ 0.41
CALD1-222ENST00000495522 FOXP4Q8IVH2 680 aaPredicted RBP17.59■□□□□ 0.41
CALD1-222ENST00000495522 HSD3B7Q9H2F3 369 aa17.59■□□□□ 0.41
CALD1-222ENST00000495522 CCNL1Q9UK58 526 aaPredicted RBP17.59■□□□□ 0.41
CALD1-222ENST00000495522 ZBTB22O15209 634 aa17.59■□□□□ 0.41
CALD1-222ENST00000495522 PLEKHA8P1O95397 391 aa17.59■□□□□ 0.41
CALD1-222ENST00000495522 SHISA4Q96DD7 197 aa17.59■□□□□ 0.41
CALD1-222ENST00000495522 ARPP21Q9UBL0 812 aaPredicted RBP17.59■□□□□ 0.41
CALD1-222ENST00000495522 PAXBP1Q9Y5B6 917 aa17.59■□□□□ 0.41
CALD1-222ENST00000495522 NHSQ6T4R5 1651 aa17.59■□□□□ 0.41
CALD1-222ENST00000495522 TRIM75PA6NK02 468 aa17.58■□□□□ 0.4
CALD1-222ENST00000495522 POLR2DO15514 142 aaKnown RBP17.58■□□□□ 0.4
CALD1-222ENST00000495522 ATP2B1P20020 1258 aa17.58■□□□□ 0.4
CALD1-222ENST00000495522 PRDX5P30044 214 aa17.58■□□□□ 0.4
CALD1-222ENST00000495522 POSTNQ15063 836 aa17.58■□□□□ 0.4
CALD1-222ENST00000495522 TMTC3Q6ZXV5 915 aa17.58■□□□□ 0.4
CALD1-222ENST00000495522 CCDC24Q8N4L8 307 aa17.58■□□□□ 0.4
CALD1-222ENST00000495522 KCND1Q9NSA2 647 aa17.58■□□□□ 0.4
CALD1-222ENST00000495522 V9GY48 417 aaPredicted RBP17.58■□□□□ 0.4
CALD1-222ENST00000495522 CCDC88AQ3V6T2 1871 aa17.58■□□□□ 0.4
CALD1-222ENST00000495522 CBFA2T2O43439 604 aa17.57■□□□□ 0.4
CALD1-222ENST00000495522 TM4SF1P30408 202 aa17.57■□□□□ 0.4
CALD1-222ENST00000495522 SBK1Q52WX2 424 aa17.57■□□□□ 0.4
CALD1-222ENST00000495522 SPTY2D1Q68D10 685 aaPredicted RBP17.57■□□□□ 0.4
CALD1-222ENST00000495522 TSC1Q92574 1164 aa17.57■□□□□ 0.4
CALD1-222ENST00000495522 BRMS1Q9HCU9 246 aa17.57■□□□□ 0.4
CALD1-222ENST00000495522 FOXN1O15353 648 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms