RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 SLC4A4Q9Y6R1 1079 aa21.22■□□□□ 0.99
HDAC4-211ENST00000494800 PLCD1P51178 756 aa21.21■□□□□ 0.99
HDAC4-211ENST00000494800 SLFNL1Q499Z3 407 aa21.21■□□□□ 0.99
HDAC4-211ENST00000494800 GPAT2Q6NUI2 795 aa21.21■□□□□ 0.99
HDAC4-211ENST00000494800 OTUD7AQ8TE49 926 aaPredicted RBP21.21■□□□□ 0.99
HDAC4-211ENST00000494800 APPBP2Q92624 585 aa21.21■□□□□ 0.99
HDAC4-211ENST00000494800 FSD1Q9BTV5 496 aa21.21■□□□□ 0.99
HDAC4-211ENST00000494800 TMOD4Q9NZQ9 345 aa21.21■□□□□ 0.99
HDAC4-211ENST00000494800 SIPA1L1O43166 1804 aa21.2■□□□□ 0.98
HDAC4-211ENST00000494800 MYH1P12882 1939 aa21.2■□□□□ 0.98
HDAC4-211ENST00000494800 ABCB5Q2M3G0 1257 aa21.2■□□□□ 0.98
HDAC4-211ENST00000494800 OTOP1Q7RTM1 612 aa21.2■□□□□ 0.98
HDAC4-211ENST00000494800 SMCR8Q8TEV9 937 aaPredicted RBP21.2■□□□□ 0.98
HDAC4-211ENST00000494800 PUS7LQ9H0K6 701 aaKnown RBP21.2■□□□□ 0.98
HDAC4-211ENST00000494800 SWAP70Q9UH65 585 aa21.2■□□□□ 0.98
HDAC4-211ENST00000494800 C19orf81C9J6K1 198 aa21.19■□□□□ 0.98
HDAC4-211ENST00000494800 PRKAB2O43741 272 aa21.19■□□□□ 0.98
HDAC4-211ENST00000494800 GH2P01242 217 aa21.19■□□□□ 0.98
HDAC4-211ENST00000494800 HMGCS2P54868 508 aa21.19■□□□□ 0.98
HDAC4-211ENST00000494800 BACE1P56817 501 aa21.19■□□□□ 0.98
HDAC4-211ENST00000494800 C17orf99Q6UX52 265 aa21.19■□□□□ 0.98
HDAC4-211ENST00000494800 SMC5Q8IY18 1101 aa21.19■□□□□ 0.98
HDAC4-211ENST00000494800 CPA4Q9UI42 421 aa21.19■□□□□ 0.98
HDAC4-211ENST00000494800 HPS5Q9UPZ3 1129 aa21.19■□□□□ 0.98
HDAC4-211ENST00000494800 NAV1Q8NEY1 1877 aa21.19■□□□□ 0.98
HDAC4-211ENST00000494800 USP17L10C9JJH3 530 aa21.18■□□□□ 0.98
HDAC4-211ENST00000494800 GNRH1P01148 92 aa21.18■□□□□ 0.98
HDAC4-211ENST00000494800 CHGBP05060 677 aa21.18■□□□□ 0.98
HDAC4-211ENST00000494800 CYP2C8P10632 490 aa21.18■□□□□ 0.98
HDAC4-211ENST00000494800 GNAT2P19087 354 aa21.18■□□□□ 0.98
HDAC4-211ENST00000494800 LACTBP83111 547 aaPredicted RBP21.18■□□□□ 0.98
HDAC4-211ENST00000494800 MTMR2Q13614 643 aa21.18■□□□□ 0.98
HDAC4-211ENST00000494800 RAB3GAP1Q15042 981 aa21.18■□□□□ 0.98
HDAC4-211ENST00000494800 SH3D19Q5HYK7 790 aa21.18■□□□□ 0.98
HDAC4-211ENST00000494800 B4GALNT3Q6L9W6 998 aa21.18■□□□□ 0.98
HDAC4-211ENST00000494800 STAP2Q9UGK3 403 aa21.18■□□□□ 0.98
HDAC4-211ENST00000494800 ATAD5Q96QE3 1844 aa21.18■□□□□ 0.98
HDAC4-211ENST00000494800 OSBPP22059 807 aa21.17■□□□□ 0.98
HDAC4-211ENST00000494800 SHMT1P34896 483 aa21.17■□□□□ 0.98
HDAC4-211ENST00000494800 PDE1AP54750 535 aa21.17■□□□□ 0.98
HDAC4-211ENST00000494800 GABPAQ06546 454 aa21.17■□□□□ 0.98
HDAC4-211ENST00000494800 STRBPQ96SI9 672 aaKnown RBP21.17■□□□□ 0.98
HDAC4-211ENST00000494800 LNPKQ9C0E8 428 aa21.17■□□□□ 0.98
HDAC4-211ENST00000494800 ARPP21Q9UBL0 812 aaPredicted RBP21.17■□□□□ 0.98
HDAC4-211ENST00000494800 SALL3Q9BXA9 1300 aa21.17■□□□□ 0.98
HDAC4-211ENST00000494800 MYH7P12883 1935 aa21.17■□□□□ 0.98
HDAC4-211ENST00000494800 PHIPQ8WWQ0 1821 aa21.16■□□□□ 0.98
HDAC4-211ENST00000494800 DDX60LQ5H9U9 1706 aaKnown RBP21.16■□□□□ 0.98
HDAC4-211ENST00000494800 MPHOSPH10O00566 681 aaKnown RBP21.16■□□□□ 0.98
HDAC4-211ENST00000494800 GIMAP6Q6P9H5 292 aa21.16■□□□□ 0.98
HDAC4-211ENST00000494800 EVI5LQ96CN4 794 aa21.16■□□□□ 0.98
HDAC4-211ENST00000494800 FEZ1Q99689 392 aa21.16■□□□□ 0.98
HDAC4-211ENST00000494800 PTPN22Q9Y2R2 807 aa21.16■□□□□ 0.98
HDAC4-211ENST00000494800 ADGRA2Q96PE1 1338 aa21.15■□□□□ 0.98
HDAC4-211ENST00000494800 USP17L12C9JPN9 530 aa21.15■□□□□ 0.98
HDAC4-211ENST00000494800 USP17L21D6R901 530 aa21.15■□□□□ 0.98
HDAC4-211ENST00000494800 GPAA1O43292 621 aa21.15■□□□□ 0.98
HDAC4-211ENST00000494800 IGHDP01880 384 aa21.15■□□□□ 0.98
HDAC4-211ENST00000494800 JAG1P78504 1218 aa21.15■□□□□ 0.98
HDAC4-211ENST00000494800 TREML2Q5T2D2 321 aa21.15■□□□□ 0.98
HDAC4-211ENST00000494800 C12orf60Q5U649 245 aa21.15■□□□□ 0.98
HDAC4-211ENST00000494800 CHD1LQ86WJ1 897 aa21.15■□□□□ 0.98
HDAC4-211ENST00000494800 OSBP2Q969R2 916 aa21.15■□□□□ 0.98
HDAC4-211ENST00000494800 APPP05067 770 aa21.14■□□□□ 0.97
HDAC4-211ENST00000494800 CYP2D6P10635 497 aa21.14■□□□□ 0.97
HDAC4-211ENST00000494800 HOXD10P28358 340 aa21.14■□□□□ 0.97
HDAC4-211ENST00000494800 USP14P54578 494 aa21.14■□□□□ 0.97
HDAC4-211ENST00000494800 NUCB1Q02818 461 aa21.14■□□□□ 0.97
HDAC4-211ENST00000494800 USP17L2Q6R6M4 530 aa21.14■□□□□ 0.97
HDAC4-211ENST00000494800 NACAP1Q9BZK3 213 aa21.14■□□□□ 0.97
HDAC4-211ENST00000494800 FMNL1O95466 1100 aaPredicted RBP21.13■□□□□ 0.97
HDAC4-211ENST00000494800 GCLCP48506 637 aaPredicted RBP21.13■□□□□ 0.97
HDAC4-211ENST00000494800 PRMT2P55345 433 aa21.13■□□□□ 0.97
HDAC4-211ENST00000494800 IRX3P78415 501 aaPredicted RBP21.13■□□□□ 0.97
HDAC4-211ENST00000494800 SHROOM1Q2M3G4 852 aaPredicted RBP21.13■□□□□ 0.97
HDAC4-211ENST00000494800 CTR9Q6PD62 1173 aa21.13■□□□□ 0.97
HDAC4-211ENST00000494800 TICAM2Q86XR7 235 aa21.13■□□□□ 0.97
HDAC4-211ENST00000494800 BCRP11274 1271 aa21.12■□□□□ 0.97
HDAC4-211ENST00000494800 PSMC4P43686 418 aa21.12■□□□□ 0.97
HDAC4-211ENST00000494800 TDO2P48775 406 aa21.12■□□□□ 0.97
HDAC4-211ENST00000494800 FCGRTP55899 365 aa21.12■□□□□ 0.97
HDAC4-211ENST00000494800 IRX6P78412 446 aaPredicted RBP21.12■□□□□ 0.97
HDAC4-211ENST00000494800 TMEM179Q6ZVK1 233 aa21.12■□□□□ 0.97
HDAC4-211ENST00000494800 DYNLL2Q96FJ2 89 aa21.12■□□□□ 0.97
HDAC4-211ENST00000494800 CCDC17Q96LX7 622 aa21.12■□□□□ 0.97
HDAC4-211ENST00000494800 PTPRFP10586 1907 aa21.12■□□□□ 0.97
HDAC4-211ENST00000494800 LOC285556D6RIA3 1793 aa21.11■□□□□ 0.97
HDAC4-211ENST00000494800 GSG1L2A8MUP6 293 aa21.11■□□□□ 0.97
HDAC4-211ENST00000494800 TRIM6-TRIM34B2RNG4 842 aa21.11■□□□□ 0.97
HDAC4-211ENST00000494800 M0R2C6 588 aa21.11■□□□□ 0.97
HDAC4-211ENST00000494800 SBK1Q52WX2 424 aa21.11■□□□□ 0.97
HDAC4-211ENST00000494800 ZMYM1Q5SVZ6 1142 aa21.11■□□□□ 0.97
HDAC4-211ENST00000494800 C16orf86Q6ZW13 317 aa21.11■□□□□ 0.97
HDAC4-211ENST00000494800 ASCC2Q9H1I8 757 aaPredicted RBP21.11■□□□□ 0.97
HDAC4-211ENST00000494800 ZNF287Q9HBT7 754 aa21.11■□□□□ 0.97
HDAC4-211ENST00000494800 CYP2D7A0A087X1C5 515 aa21.1■□□□□ 0.97
HDAC4-211ENST00000494800 PATL2C9JE40 543 aaKnown RBP21.1■□□□□ 0.97
HDAC4-211ENST00000494800 HOXA7P31268 230 aaPredicted RBP21.1■□□□□ 0.97
HDAC4-211ENST00000494800 CDK8P49336 464 aa21.1■□□□□ 0.97
HDAC4-211ENST00000494800 EVX2Q03828 476 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms