RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 USP50Q70EL3 339 aaPredicted RBP14.27□□□□□ -0.13
BRD3-206ENST00000494743 CHST3Q7LGC8 479 aa14.27□□□□□ -0.13
BRD3-206ENST00000494743 APOBEC3FQ8IUX4 373 aaKnown RBP14.27□□□□□ -0.13
BRD3-206ENST00000494743 CSRNP1Q96S65 589 aa14.27□□□□□ -0.13
BRD3-206ENST00000494743 MTA3Q9BTC8 594 aa14.27□□□□□ -0.13
BRD3-206ENST00000494743 LRRC2Q9BYS8 371 aa14.27□□□□□ -0.13
BRD3-206ENST00000494743 ZNF287Q9HBT7 754 aa14.27□□□□□ -0.13
BRD3-206ENST00000494743 TOMM22Q9NS69 142 aa14.27□□□□□ -0.13
BRD3-206ENST00000494743 GGA3Q9NZ52 723 aa14.27□□□□□ -0.13
BRD3-206ENST00000494743 SWAP70Q9UH65 585 aa14.27□□□□□ -0.13
BRD3-206ENST00000494743 PLIN4Q96Q06 1357 aa14.26□□□□□ -0.13
BRD3-206ENST00000494743 IQCA1LA6NCM1 817 aa14.26□□□□□ -0.13
BRD3-206ENST00000494743 SH2B2O14492 632 aaPredicted RBP14.26□□□□□ -0.13
BRD3-206ENST00000494743 SLURP2P0DP57 97 aa14.26□□□□□ -0.13
BRD3-206ENST00000494743 EPHX2P34913 555 aa14.26□□□□□ -0.13
BRD3-206ENST00000494743 ANKRD1Q15327 319 aa14.26□□□□□ -0.13
BRD3-206ENST00000494743 HSCBQ8IWL3 235 aa14.26□□□□□ -0.13
BRD3-206ENST00000494743 ZSCAN29Q8IWY8 852 aaPredicted RBP14.26□□□□□ -0.13
BRD3-206ENST00000494743 IGDCC4Q8TDY8 1250 aa14.26□□□□□ -0.13
BRD3-206ENST00000494743 TMEM87BQ96K49 555 aa14.26□□□□□ -0.13
BRD3-206ENST00000494743 DEFB129Q9H1M3 183 aa14.26□□□□□ -0.13
BRD3-206ENST00000494743 TAF1DQ9H5J8 278 aaPredicted RBP14.26□□□□□ -0.13
BRD3-206ENST00000494743 MKNK2Q9HBH9 465 aa14.26□□□□□ -0.13
BRD3-206ENST00000494743 WBP1LQ9NX94 342 aa14.26□□□□□ -0.13
BRD3-206ENST00000494743 PDE4DIPQ5VU43 2346 aa14.26□□□□□ -0.13
BRD3-206ENST00000494743 MYH1P12882 1939 aa14.25□□□□□ -0.13
BRD3-206ENST00000494743 K7ELQ4 463 aaPredicted RBP14.25□□□□□ -0.13
BRD3-206ENST00000494743 RANBP6O60518 1105 aaKnown RBP14.25□□□□□ -0.13
BRD3-206ENST00000494743 HSPA8P11142 646 aaKnown RBP14.25□□□□□ -0.13
BRD3-206ENST00000494743 EVCP57679 992 aa14.25□□□□□ -0.13
BRD3-206ENST00000494743 MAP3K10Q02779 954 aa14.25□□□□□ -0.13
BRD3-206ENST00000494743 BECN1Q14457 450 aa14.25□□□□□ -0.13
BRD3-206ENST00000494743 FAM47AQ5JRC9 791 aa14.25□□□□□ -0.13
BRD3-206ENST00000494743 TATDN1Q6P1N9 297 aa14.25□□□□□ -0.13
BRD3-206ENST00000494743 FOXP4Q8IVH2 680 aaPredicted RBP14.25□□□□□ -0.13
BRD3-206ENST00000494743 IPO9Q96P70 1041 aaKnown RBP14.25□□□□□ -0.13
BRD3-206ENST00000494743 GPHNQ9NQX3 736 aaPredicted RBP14.25□□□□□ -0.13
BRD3-206ENST00000494743 HERC5Q9UII4 1024 aaKnown RBP14.25□□□□□ -0.13
BRD3-206ENST00000494743 SCAF8Q9UPN6 1271 aaKnown RBP14.25□□□□□ -0.13
BRD3-206ENST00000494743 TSPY2A6NKD2 308 aa14.24□□□□□ -0.13
BRD3-206ENST00000494743 TBC1D12O60347 775 aa14.24□□□□□ -0.13
BRD3-206ENST00000494743 VEGFBP49765 207 aa14.24□□□□□ -0.13
BRD3-206ENST00000494743 TFAP4Q01664 338 aa14.24□□□□□ -0.13
BRD3-206ENST00000494743 SEC23AQ15436 765 aa14.24□□□□□ -0.13
BRD3-206ENST00000494743 SGMS1Q86VZ5 419 aa14.24□□□□□ -0.13
BRD3-206ENST00000494743 CRACR2BQ8N4Y2 399 aaPredicted RBP14.24□□□□□ -0.13
BRD3-206ENST00000494743 ZC3H15Q8WU90 426 aaKnown RBP14.24□□□□□ -0.13
BRD3-206ENST00000494743 BRF1Q92994 677 aa14.24□□□□□ -0.13
BRD3-206ENST00000494743 TMX3Q96JJ7 454 aa14.24□□□□□ -0.13
BRD3-206ENST00000494743 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.24□□□□□ -0.13
BRD3-206ENST00000494743 LY9Q9HBG7 655 aa14.24□□□□□ -0.13
BRD3-206ENST00000494743 TCP11L1Q9NUJ3 509 aa14.24□□□□□ -0.13
BRD3-206ENST00000494743 TPCN1Q9ULQ1 816 aa14.24□□□□□ -0.13
BRD3-206ENST00000494743 ANGEL1Q9UNK9 670 aaKnown RBP14.24□□□□□ -0.13
BRD3-206ENST00000494743 LIMCH1Q9UPQ0 1083 aa14.24□□□□□ -0.13
BRD3-206ENST00000494743 PPP2R3BQ9Y5P8 575 aa14.24□□□□□ -0.13
BRD3-206ENST00000494743 TNKSO95271 1327 aa14.23□□□□□ -0.13
BRD3-206ENST00000494743 SCN4AP35499 1836 aa14.23□□□□□ -0.13
BRD3-206ENST00000494743 FAM196BA6NMK8 535 aa14.23□□□□□ -0.13
BRD3-206ENST00000494743 LIFRP42702 1097 aa14.23□□□□□ -0.13
BRD3-206ENST00000494743 NOVP48745 357 aa14.23□□□□□ -0.13
BRD3-206ENST00000494743 CHADLQ6NUI6 762 aa14.23□□□□□ -0.13
BRD3-206ENST00000494743 IQCA1Q86XH1 822 aa14.23□□□□□ -0.13
BRD3-206ENST00000494743 ZNF444Q8N0Y2 327 aaPredicted RBP14.23□□□□□ -0.13
BRD3-206ENST00000494743 NEDD1Q8NHV4 660 aa14.23□□□□□ -0.13
BRD3-206ENST00000494743 ZSCAN10Q96SZ4 725 aaPredicted RBP14.23□□□□□ -0.13
BRD3-206ENST00000494743 ZKSCAN3Q9BRR0 538 aa14.23□□□□□ -0.13
BRD3-206ENST00000494743 LARP6Q9BRS8 491 aaKnown RBP14.23□□□□□ -0.13
BRD3-206ENST00000494743 SENP2Q9HC62 589 aa14.23□□□□□ -0.13
BRD3-206ENST00000494743 IL17RBQ9NRM6 502 aa14.23□□□□□ -0.13
BRD3-206ENST00000494743 TNRC18O15417 2968 aaPredicted RBP14.23□□□□□ -0.13
BRD3-206ENST00000494743 SSC5DA1L4H1 1573 aa14.22□□□□□ -0.13
BRD3-206ENST00000494743 IGKV6D-41A0A0C4DH26 115 aa14.22□□□□□ -0.13
BRD3-206ENST00000494743 IFIT3O14879 490 aaKnown RBP14.22□□□□□ -0.13
BRD3-206ENST00000494743 NMT2O60551 498 aa14.22□□□□□ -0.13
BRD3-206ENST00000494743 LARGE1O95461 756 aa14.22□□□□□ -0.13
BRD3-206ENST00000494743 TSPY3P0CV98 308 aa14.22□□□□□ -0.13
BRD3-206ENST00000494743 TSPY8P0CW00 308 aa14.22□□□□□ -0.13
BRD3-206ENST00000494743 AKR1B1P15121 316 aa14.22□□□□□ -0.13
BRD3-206ENST00000494743 FGD1P98174 961 aa14.22□□□□□ -0.13
BRD3-206ENST00000494743 CUL4AQ13619 759 aa14.22□□□□□ -0.13
BRD3-206ENST00000494743 SART3Q15020 963 aaKnown RBP14.22□□□□□ -0.13
BRD3-206ENST00000494743 TMEM67Q5HYA8 995 aa14.22□□□□□ -0.13
BRD3-206ENST00000494743 RCSD1Q6JBY9 416 aa14.22□□□□□ -0.13
BRD3-206ENST00000494743 NOL8Q76FK4 1167 aaKnown RBP14.22□□□□□ -0.13
BRD3-206ENST00000494743 ENAHQ8N8S7 591 aaPredicted RBP14.22□□□□□ -0.13
BRD3-206ENST00000494743 UBAC1Q9BSL1 405 aa14.22□□□□□ -0.13
BRD3-206ENST00000494743 APOBRQ0VD83 1088 aa14.21□□□□□ -0.13
BRD3-206ENST00000494743 ST3GAL1Q11201 340 aa14.21□□□□□ -0.13
BRD3-206ENST00000494743 RRP1BQ14684 758 aaKnown RBP14.21□□□□□ -0.13
BRD3-206ENST00000494743 ME3Q16798 604 aa14.21□□□□□ -0.13
BRD3-206ENST00000494743 NBPF12Q5TAG4 269 aaPredicted RBP14.21□□□□□ -0.13
BRD3-206ENST00000494743 PNMA8AQ86V59 439 aaPredicted RBP14.21□□□□□ -0.13
BRD3-206ENST00000494743 ANKS1AQ92625 1134 aa14.21□□□□□ -0.13
BRD3-206ENST00000494743 ZSCAN31Q96LW9 406 aaPredicted RBP14.21□□□□□ -0.13
BRD3-206ENST00000494743 CCDC17Q96LX7 622 aa14.21□□□□□ -0.13
BRD3-206ENST00000494743 TRIM34Q9BYJ4 488 aa14.21□□□□□ -0.13
BRD3-206ENST00000494743 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.21□□□□□ -0.13
BRD3-206ENST00000494743 SH2B1Q9NRF2 756 aaPredicted RBP14.21□□□□□ -0.13
BRD3-206ENST00000494743 BRPF3Q9ULD4 1205 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms