RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 LGR6Q9HBX8 967 aa4.4□□□□□ -1.71
LRIF1-203ENST00000494675 CAPN10Q9HC96 672 aa4.4□□□□□ -1.71
LRIF1-203ENST00000494675 PAK6Q9NQU5 681 aaPredicted RBP4.4□□□□□ -1.71
LRIF1-203ENST00000494675 FAM105AQ9NUU6 356 aa4.4□□□□□ -1.71
LRIF1-203ENST00000494675 PPP1R9AQ9ULJ8 1098 aa4.4□□□□□ -1.71
LRIF1-203ENST00000494675 SUPT16HQ9Y5B9 1047 aaKnown RBP4.4□□□□□ -1.71
LRIF1-203ENST00000494675 PCDHB5Q9Y5E4 795 aa4.4□□□□□ -1.71
LRIF1-203ENST00000494675 TNNI2P48788 182 aa4.39□□□□□ -1.71
LRIF1-203ENST00000494675 ZNF252P-AS1Q0IIN9 211 aa4.39□□□□□ -1.71
LRIF1-203ENST00000494675 NAALADL2Q58DX5 795 aa4.39□□□□□ -1.71
LRIF1-203ENST00000494675 FBXL19Q6PCT2 694 aa4.39□□□□□ -1.71
LRIF1-203ENST00000494675 WDR89Q96FK6 387 aaPredicted RBP4.39□□□□□ -1.71
LRIF1-203ENST00000494675 C8orf37Q96NL8 207 aa4.39□□□□□ -1.71
LRIF1-203ENST00000494675 CRIM1Q9NZV1 1036 aa4.39□□□□□ -1.71
LRIF1-203ENST00000494675 ADAMTS1Q9UHI8 967 aa4.39□□□□□ -1.71
LRIF1-203ENST00000494675 RNGTTO60942 597 aaKnown RBP4.38□□□□□ -1.71
LRIF1-203ENST00000494675 PAK2Q13177 524 aa4.38□□□□□ -1.71
LRIF1-203ENST00000494675 SEPT6Q14141 434 aa4.38□□□□□ -1.71
LRIF1-203ENST00000494675 MPRIPQ6WCQ1 1025 aa4.38□□□□□ -1.71
LRIF1-203ENST00000494675 BCL7CQ8WUZ0 217 aaPredicted RBP4.38□□□□□ -1.71
LRIF1-203ENST00000494675 TRIM37O94972 964 aa4.38□□□□□ -1.71
LRIF1-203ENST00000494675 SCARA3Q6AZY7 606 aa4.38□□□□□ -1.71
LRIF1-203ENST00000494675 SEZ6L2Q6UXD5 910 aa4.38□□□□□ -1.71
LRIF1-203ENST00000494675 BNC2Q6ZN30 1099 aaPredicted RBP4.38□□□□□ -1.71
LRIF1-203ENST00000494675 CCDC84Q86UT8 332 aaPredicted RBP4.38□□□□□ -1.71
LRIF1-203ENST00000494675 GPBAR1Q8TDU6 330 aa4.38□□□□□ -1.71
LRIF1-203ENST00000494675 FANCD2OSQ96PS1 177 aa4.38□□□□□ -1.71
LRIF1-203ENST00000494675 C1GALT1Q9NS00 363 aa4.38□□□□□ -1.71
LRIF1-203ENST00000494675 PCDHA4Q9UN74 947 aa4.38□□□□□ -1.71
LRIF1-203ENST00000494675 FARP2O94887 1054 aaPredicted RBP4.37□□□□□ -1.71
LRIF1-203ENST00000494675 BPNT1O95861 308 aa4.37□□□□□ -1.71
LRIF1-203ENST00000494675 F13A1P00488 732 aa4.37□□□□□ -1.71
LRIF1-203ENST00000494675 APOBRQ0VD83 1088 aa4.37□□□□□ -1.71
LRIF1-203ENST00000494675 PKN1Q16512 942 aa4.37□□□□□ -1.71
LRIF1-203ENST00000494675 KRTAP19-4Q3LI73 84 aa4.37□□□□□ -1.71
LRIF1-203ENST00000494675 NFXL1Q6ZNB6 911 aa4.37□□□□□ -1.71
LRIF1-203ENST00000494675 VPS37DQ86XT2 251 aa4.37□□□□□ -1.71
LRIF1-203ENST00000494675 NETO1Q8TDF5 533 aa4.37□□□□□ -1.71
LRIF1-203ENST00000494675 GATAD2BQ8WXI9 593 aa4.37□□□□□ -1.71
LRIF1-203ENST00000494675 GPRASP2Q96D09 838 aa4.37□□□□□ -1.71
LRIF1-203ENST00000494675 SSU72Q9NP77 194 aaKnown RBP4.37□□□□□ -1.71
LRIF1-203ENST00000494675 UBP1Q9NZI7 540 aa4.37□□□□□ -1.71
LRIF1-203ENST00000494675 PCOLCE2Q9UKZ9 415 aa4.37□□□□□ -1.71
LRIF1-203ENST00000494675 GREM1O60565 184 aa4.36□□□□□ -1.71
LRIF1-203ENST00000494675 FAM87AP0C7U9 286 aa4.36□□□□□ -1.71
LRIF1-203ENST00000494675 GARTP22102 1010 aa4.36□□□□□ -1.71
LRIF1-203ENST00000494675 PTPN11Q06124 597 aaPredicted RBP4.36□□□□□ -1.71
LRIF1-203ENST00000494675 FAM196AQ6ZSG2 479 aa4.36□□□□□ -1.71
LRIF1-203ENST00000494675 PI4K2BQ8TCG2 481 aa4.36□□□□□ -1.71
LRIF1-203ENST00000494675 GAL3ST3Q96A11 431 aa4.36□□□□□ -1.71
LRIF1-203ENST00000494675 EAF1Q96JC9 268 aaPredicted RBP4.36□□□□□ -1.71
LRIF1-203ENST00000494675 NT5C1AQ9BXI3 368 aa4.36□□□□□ -1.71
LRIF1-203ENST00000494675 KCNQ5Q9NR82 932 aa4.36□□□□□ -1.71
LRIF1-203ENST00000494675 DISC1Q9NRI5 854 aa4.36□□□□□ -1.71
LRIF1-203ENST00000494675 VAV3Q9UKW4 847 aa4.36□□□□□ -1.71
LRIF1-203ENST00000494675 PCDHGC5Q9Y5F6 944 aa4.36□□□□□ -1.71
LRIF1-203ENST00000494675 ROBO2Q9HCK4 1378 aa4.36□□□□□ -1.71
LRIF1-203ENST00000494675 TLR3O15455 904 aaKnown RBP4.36□□□□□ -1.71
LRIF1-203ENST00000494675 DNAJA1P31689 397 aaKnown RBP4.36□□□□□ -1.71
LRIF1-203ENST00000494675 GJA8P48165 433 aa4.36□□□□□ -1.71
LRIF1-203ENST00000494675 BNIP3Q12983 259 aa4.36□□□□□ -1.71
LRIF1-203ENST00000494675 CWF19L2Q2TBE0 894 aaKnown RBP4.36□□□□□ -1.71
LRIF1-203ENST00000494675 ZNF792Q3KQV3 632 aa4.36□□□□□ -1.71
LRIF1-203ENST00000494675 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.36□□□□□ -1.71
LRIF1-203ENST00000494675 SMYD4Q8IYR2 804 aaPredicted RBP4.36□□□□□ -1.71
LRIF1-203ENST00000494675 SPATA32Q96LK8 384 aa4.36□□□□□ -1.71
LRIF1-203ENST00000494675 TINF2Q9BSI4 451 aa4.36□□□□□ -1.71
LRIF1-203ENST00000494675 FAM221AA4D161 298 aa4.35□□□□□ -1.71
LRIF1-203ENST00000494675 DYNC1LI2O43237 492 aaPredicted RBP4.35□□□□□ -1.71
LRIF1-203ENST00000494675 CILPO75339 1184 aa4.35□□□□□ -1.71
LRIF1-203ENST00000494675 PAPLNO95428 1278 aa4.35□□□□□ -1.71
LRIF1-203ENST00000494675 MCM4P33991 863 aa4.35□□□□□ -1.71
LRIF1-203ENST00000494675 ARID5AQ03989 594 aa4.35□□□□□ -1.71
LRIF1-203ENST00000494675 MPP2Q14168 576 aa4.35□□□□□ -1.71
LRIF1-203ENST00000494675 TTLL4Q14679 1199 aa4.35□□□□□ -1.71
LRIF1-203ENST00000494675 SEZ6Q53EL9 994 aa4.35□□□□□ -1.71
LRIF1-203ENST00000494675 ZNF574Q6ZN55 896 aaPredicted RBP4.35□□□□□ -1.71
LRIF1-203ENST00000494675 HDXQ7Z353 690 aa4.35□□□□□ -1.71
LRIF1-203ENST00000494675 FBXO27Q8NI29 283 aa4.35□□□□□ -1.71
LRIF1-203ENST00000494675 ELMO3Q96BJ8 720 aa4.35□□□□□ -1.71
LRIF1-203ENST00000494675 CACNA2D2Q9NY47 1150 aa4.35□□□□□ -1.71
LRIF1-203ENST00000494675 TMEM265A0A087WTH1 108 aa4.34□□□□□ -1.71
LRIF1-203ENST00000494675 CRKP46108 304 aa4.34□□□□□ -1.71
LRIF1-203ENST00000494675 RPL6Q02878 288 aaKnown RBP4.34□□□□□ -1.71
LRIF1-203ENST00000494675 PRKCQQ04759 706 aa4.34□□□□□ -1.71
LRIF1-203ENST00000494675 ZC3H12AQ5D1E8 599 aaKnown RBP4.34□□□□□ -1.71
LRIF1-203ENST00000494675 SPRED2Q7Z698 418 aa4.34□□□□□ -1.71
LRIF1-203ENST00000494675 SLC43A3Q8NBI5 491 aa4.34□□□□□ -1.71
LRIF1-203ENST00000494675 RNF214Q8ND24 703 aa4.34□□□□□ -1.71
LRIF1-203ENST00000494675 NKD1Q969G9 470 aa4.34□□□□□ -1.71
LRIF1-203ENST00000494675 RC3H2Q9HBD1 1191 aaKnown RBP4.34□□□□□ -1.71
LRIF1-203ENST00000494675 PICK1Q9NRD5 415 aa4.34□□□□□ -1.71
LRIF1-203ENST00000494675 DCDC2CA8MYV0 355 aa4.34□□□□□ -1.71
LRIF1-203ENST00000494675 FUT4P22083 530 aa4.34□□□□□ -1.71
LRIF1-203ENST00000494675 ERVK-24P63145 666 aa4.34□□□□□ -1.71
LRIF1-203ENST00000494675 CDK5R2Q13319 367 aa4.34□□□□□ -1.71
LRIF1-203ENST00000494675 INPP5AQ14642 412 aa4.34□□□□□ -1.71
LRIF1-203ENST00000494675 SF3A1Q15459 793 aaKnown RBP4.34□□□□□ -1.71
LRIF1-203ENST00000494675 IFI16Q16666 785 aaKnown RBP4.34□□□□□ -1.71
LRIF1-203ENST00000494675 WIPI1Q5MNZ9 446 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms