RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 RLBP1P12271 317 aa15.49■□□□□ 0.07
SKA1-205ENST00000494518 ATP8B2P98198 1209 aa15.49■□□□□ 0.07
SKA1-205ENST00000494518 HNRNPUQ00839 825 aaKnown RBP eCLIP15.49■□□□□ 0.07
SKA1-205ENST00000494518 IRF5Q13568 498 aa15.49■□□□□ 0.07
SKA1-205ENST00000494518 CRACR2BQ8N4Y2 399 aaPredicted RBP15.49■□□□□ 0.07
SKA1-205ENST00000494518 TRIM34Q9BYJ4 488 aa15.49■□□□□ 0.07
SKA1-205ENST00000494518 GPR108Q9NPR9 543 aa15.49■□□□□ 0.07
SKA1-205ENST00000494518 RBM27Q9P2N5 1060 aaKnown RBP15.49■□□□□ 0.07
SKA1-205ENST00000494518 DBNLQ9UJU6 430 aaKnown RBP15.49■□□□□ 0.07
SKA1-205ENST00000494518 PALD1Q9ULE6 856 aa15.49■□□□□ 0.07
SKA1-205ENST00000494518 TRIM32Q13049 653 aa15.48■□□□□ 0.07
SKA1-205ENST00000494518 PABPC4Q13310 644 aaKnown RBP eCLIP15.48■□□□□ 0.07
SKA1-205ENST00000494518 MIGA1Q8NAN2 632 aa15.48■□□□□ 0.07
SKA1-205ENST00000494518 PXYLP1Q8TE99 480 aa15.48■□□□□ 0.07
SKA1-205ENST00000494518 AS3MTQ9HBK9 375 aa15.48■□□□□ 0.07
SKA1-205ENST00000494518 PLCG2P16885 1265 aa15.47■□□□□ 0.07
SKA1-205ENST00000494518 CYP7A1P22680 504 aa15.47■□□□□ 0.07
SKA1-205ENST00000494518 GCLCP48506 637 aaPredicted RBP15.47■□□□□ 0.07
SKA1-205ENST00000494518 PPP4CP60510 307 aa15.47■□□□□ 0.07
SKA1-205ENST00000494518 IRX3P78415 501 aaPredicted RBP15.47■□□□□ 0.07
SKA1-205ENST00000494518 DDX60LQ5H9U9 1706 aaKnown RBP15.47■□□□□ 0.07
SKA1-205ENST00000494518 SH3D19Q5HYK7 790 aa15.47■□□□□ 0.07
SKA1-205ENST00000494518 NAV1Q8NEY1 1877 aa15.47■□□□□ 0.07
SKA1-205ENST00000494518 DIS3LQ8TF46 1054 aaKnown RBP15.47■□□□□ 0.07
SKA1-205ENST00000494518 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.47■□□□□ 0.07
SKA1-205ENST00000494518 DHX36Q9H2U1 1008 aaKnown RBP15.47■□□□□ 0.07
SKA1-205ENST00000494518 TMOD4Q9NZQ9 345 aa15.47■□□□□ 0.07
SKA1-205ENST00000494518 IDH1O75874 414 aaKnown RBP15.46■□□□□ 0.07
SKA1-205ENST00000494518 BACE1P56817 501 aa15.46■□□□□ 0.07
SKA1-205ENST00000494518 EAF2Q96CJ1 260 aaPredicted RBP15.46■□□□□ 0.07
SKA1-205ENST00000494518 PAWRQ96IZ0 340 aaKnown RBP15.46■□□□□ 0.07
SKA1-205ENST00000494518 P2RX7Q99572 595 aaKnown RBP15.46■□□□□ 0.07
SKA1-205ENST00000494518 TBC1D2Q9BYX2 928 aa15.46■□□□□ 0.07
SKA1-205ENST00000494518 PAK6Q9NQU5 681 aaPredicted RBP15.46■□□□□ 0.07
SKA1-205ENST00000494518 ZBTB21Q9ULJ3 1066 aa15.46■□□□□ 0.07
SKA1-205ENST00000494518 LAMA3Q16787 3333 aa15.46■□□□□ 0.06
SKA1-205ENST00000494518 ZBTB7BO15156 539 aaPredicted RBP15.45■□□□□ 0.06
SKA1-205ENST00000494518 ASNSP08243 561 aa15.45■□□□□ 0.06
SKA1-205ENST00000494518 CYP2B6P20813 491 aa15.45■□□□□ 0.06
SKA1-205ENST00000494518 MAGEB6Q8N7X4 407 aa15.45■□□□□ 0.06
SKA1-205ENST00000494518 WDR18Q9BV38 432 aa15.45■□□□□ 0.06
SKA1-205ENST00000494518 BCL11AQ9H165 835 aa15.45■□□□□ 0.06
SKA1-205ENST00000494518 TXNRD2Q9NNW7 524 aa15.45■□□□□ 0.06
SKA1-205ENST00000494518 GJD2Q9UKL4 321 aa15.45■□□□□ 0.06
SKA1-205ENST00000494518 EXOC6BQ9Y2D4 811 aa15.45■□□□□ 0.06
SKA1-205ENST00000494518 NR2E3Q9Y5X4 410 aa15.45■□□□□ 0.06
SKA1-205ENST00000494518 EVI5O60447 810 aa15.44■□□□□ 0.06
SKA1-205ENST00000494518 HMGCRP04035 888 aa15.44■□□□□ 0.06
SKA1-205ENST00000494518 HLA-DOAP06340 250 aa15.44■□□□□ 0.06
SKA1-205ENST00000494518 ZYXQ15942 572 aaKnown RBP15.44■□□□□ 0.06
SKA1-205ENST00000494518 FOXP4Q8IVH2 680 aaPredicted RBP15.44■□□□□ 0.06
SKA1-205ENST00000494518 PAGR1Q9BTK6 254 aa15.44■□□□□ 0.06
SKA1-205ENST00000494518 ANTXR1Q9H6X2 564 aa15.44■□□□□ 0.06
SKA1-205ENST00000494518 NOP58Q9Y2X3 529 aaKnown RBP15.44■□□□□ 0.06
SKA1-205ENST00000494518 MYH8P13535 1937 aa15.44■□□□□ 0.06
SKA1-205ENST00000494518 USP17L10C9JJH3 530 aa15.43■□□□□ 0.06
SKA1-205ENST00000494518 GH2P01242 217 aa15.43■□□□□ 0.06
SKA1-205ENST00000494518 USP5P45974 858 aa15.43■□□□□ 0.06
SKA1-205ENST00000494518 HERVK_113P62684 666 aa15.43■□□□□ 0.06
SKA1-205ENST00000494518 CEP85Q6P2H3 762 aa15.43■□□□□ 0.06
SKA1-205ENST00000494518 PANK1Q8TE04 598 aa15.43■□□□□ 0.06
SKA1-205ENST00000494518 TRIB2Q92519 343 aa15.43■□□□□ 0.06
SKA1-205ENST00000494518 ZNF512BQ96KM6 892 aaPredicted RBP15.43■□□□□ 0.06
SKA1-205ENST00000494518 CRISPLD2Q9H0B8 497 aa15.43■□□□□ 0.06
SKA1-205ENST00000494518 MORF4L1Q9UBU8 362 aa15.43■□□□□ 0.06
SKA1-205ENST00000494518 AACSQ86V21 672 aa15.42■□□□□ 0.06
SKA1-205ENST00000494518 METTL16Q86W50 562 aaKnown RBP15.42■□□□□ 0.06
SKA1-205ENST00000494518 FRMPD3Q5JV73 1810 aa15.42■□□□□ 0.06
SKA1-205ENST00000494518 C19orf81C9J6K1 198 aa15.41■□□□□ 0.06
SKA1-205ENST00000494518 APBB1O00213 710 aa15.41■□□□□ 0.06
SKA1-205ENST00000494518 HOXA7P31268 230 aaPredicted RBP15.41■□□□□ 0.06
SKA1-205ENST00000494518 Q3C1V9 767 aa15.41■□□□□ 0.06
SKA1-205ENST00000494518 NECAB2Q7Z6G3 386 aa15.41■□□□□ 0.06
SKA1-205ENST00000494518 C7orf61Q8IZ16 206 aa15.41■□□□□ 0.06
SKA1-205ENST00000494518 MIER1Q8N108 512 aa15.41■□□□□ 0.06
SKA1-205ENST00000494518 GPRC5AQ8NFJ5 357 aa15.41■□□□□ 0.06
SKA1-205ENST00000494518 FEZ1Q99689 392 aa15.41■□□□□ 0.06
SKA1-205ENST00000494518 PORCNQ9H237 461 aa15.41■□□□□ 0.06
SKA1-205ENST00000494518 HMX1Q9NP08 348 aaPredicted RBP15.41■□□□□ 0.06
SKA1-205ENST00000494518 IL1RAPL2Q9NP60 686 aa15.41■□□□□ 0.06
SKA1-205ENST00000494518 EMILIN3Q9NT22 766 aa15.41■□□□□ 0.06
SKA1-205ENST00000494518 RBPJLQ9UBG7 517 aa15.41■□□□□ 0.06
SKA1-205ENST00000494518 BAZ2AQ9UIF9 1905 aaKnown RBP15.41■□□□□ 0.06
SKA1-205ENST00000494518 RPTORQ8N122 1335 aa15.41■□□□□ 0.06
SKA1-205ENST00000494518 PRKAR2AP13861 404 aaKnown RBP15.4■□□□□ 0.06
SKA1-205ENST00000494518 ERVK-9P63128 1117 aa15.4■□□□□ 0.06
SKA1-205ENST00000494518 ERVK-24P63145 666 aa15.4■□□□□ 0.06
SKA1-205ENST00000494518 RAB3GAP1Q15042 981 aa15.4■□□□□ 0.06
SKA1-205ENST00000494518 USP17L2Q6R6M4 530 aa15.4■□□□□ 0.06
SKA1-205ENST00000494518 POTEEQ6S8J3 1075 aa15.4■□□□□ 0.06
SKA1-205ENST00000494518 CCAR1Q8IX12 1150 aaKnown RBP15.4■□□□□ 0.06
SKA1-205ENST00000494518 NUDT12Q9BQG2 462 aa15.4■□□□□ 0.06
SKA1-205ENST00000494518 PRO3102Q9H379 93 aa15.4■□□□□ 0.06
SKA1-205ENST00000494518 STAP2Q9UGK3 403 aa15.4■□□□□ 0.06
SKA1-205ENST00000494518 ZMYND8Q9ULU4 1186 aaPredicted RBP15.4■□□□□ 0.06
SKA1-205ENST00000494518 EVX2Q03828 476 aa15.39■□□□□ 0.05
SKA1-205ENST00000494518 MAP3K12Q12852 859 aa15.39■□□□□ 0.05
SKA1-205ENST00000494518 PDE3AQ14432 1141 aa15.39■□□□□ 0.05
SKA1-205ENST00000494518 CCL14Q16627 93 aa15.39■□□□□ 0.05
SKA1-205ENST00000494518 ACER1Q8TDN7 264 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms