RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 SAMD7Q7Z3H4 446 aa24.18■■□□□ 1.46
KPNA1-210ENST00000494339 ENAHQ8N8S7 591 aaPredicted RBP24.18■■□□□ 1.46
KPNA1-210ENST00000494339 DHX36Q9H2U1 1008 aaKnown RBP24.18■■□□□ 1.46
KPNA1-210ENST00000494339 CCDC69A6NI79 296 aa24.18■■□□□ 1.46
KPNA1-210ENST00000494339 MMP14P50281 582 aa24.18■■□□□ 1.46
KPNA1-210ENST00000494339 SEC23AQ15436 765 aa24.18■■□□□ 1.46
KPNA1-210ENST00000494339 C9orf131Q5VYM1 1079 aa24.18■■□□□ 1.46
KPNA1-210ENST00000494339 APOA5Q6Q788 366 aa24.18■■□□□ 1.46
KPNA1-210ENST00000494339 GPC2Q8N158 579 aa24.18■■□□□ 1.46
KPNA1-210ENST00000494339 HPS5Q9UPZ3 1129 aa24.18■■□□□ 1.46
KPNA1-210ENST00000494339 TSPY3P0CV98 308 aa24.17■■□□□ 1.46
KPNA1-210ENST00000494339 TSPY8P0CW00 308 aa24.17■■□□□ 1.46
KPNA1-210ENST00000494339 SLURP2P0DP57 97 aa24.17■■□□□ 1.46
KPNA1-210ENST00000494339 NBR1Q14596 966 aa24.17■■□□□ 1.46
KPNA1-210ENST00000494339 MYL10Q9BUA6 226 aa24.17■■□□□ 1.46
KPNA1-210ENST00000494339 SLC12A7Q9Y666 1083 aa24.17■■□□□ 1.46
KPNA1-210ENST00000494339 SIPA1L1O43166 1804 aa24.17■■□□□ 1.46
KPNA1-210ENST00000494339 RXRAP19793 462 aa24.16■■□□□ 1.46
KPNA1-210ENST00000494339 TBC1D10BQ4KMP7 808 aaPredicted RBP24.16■■□□□ 1.46
KPNA1-210ENST00000494339 MICU3Q86XE3 530 aa24.16■■□□□ 1.46
KPNA1-210ENST00000494339 TMTC2Q8N394 836 aa24.16■■□□□ 1.46
KPNA1-210ENST00000494339 PI4KBQ9UBF8 816 aa24.16■■□□□ 1.46
KPNA1-210ENST00000494339 GJB2P29033 226 aa24.15■■□□□ 1.46
KPNA1-210ENST00000494339 NT5C2P49902 561 aa24.15■■□□□ 1.46
KPNA1-210ENST00000494339 IFIT1BQ5T764 474 aaKnown RBP24.15■■□□□ 1.46
KPNA1-210ENST00000494339 CRACR2BQ8N4Y2 399 aaPredicted RBP24.15■■□□□ 1.46
KPNA1-210ENST00000494339 EHD4Q9H223 541 aa24.15■■□□□ 1.46
KPNA1-210ENST00000494339 IL17RBQ9NRM6 502 aa24.15■■□□□ 1.46
KPNA1-210ENST00000494339 ATRNL1Q5VV63 1379 aa24.14■■□□□ 1.46
KPNA1-210ENST00000494339 FAM196BA6NMK8 535 aa24.14■■□□□ 1.46
KPNA1-210ENST00000494339 ZBTB43O43298 467 aa24.14■■□□□ 1.46
KPNA1-210ENST00000494339 CCDC144CPQ8IYA2 1237 aa24.14■■□□□ 1.46
KPNA1-210ENST00000494339 SWAP70Q9UH65 585 aa24.14■■□□□ 1.46
KPNA1-210ENST00000494339 CNTNAP1P78357 1384 aa24.14■■□□□ 1.45
KPNA1-210ENST00000494339 H7C1D1 291 aa24.14■■□□□ 1.45
KPNA1-210ENST00000494339 DDNO94850 711 aaPredicted RBP24.14■■□□□ 1.45
KPNA1-210ENST00000494339 METAP2P50579 478 aaKnown RBP eCLIP24.14■■□□□ 1.45
KPNA1-210ENST00000494339 PKP1Q13835 747 aa24.14■■□□□ 1.45
KPNA1-210ENST00000494339 KIF4BQ2VIQ3 1234 aa24.14■■□□□ 1.45
KPNA1-210ENST00000494339 SYNE3Q6ZMZ3 975 aa24.14■■□□□ 1.45
KPNA1-210ENST00000494339 GPRC5DQ9NZD1 345 aa24.14■■□□□ 1.45
KPNA1-210ENST00000494339 JAK2O60674 1132 aa24.13■■□□□ 1.45
KPNA1-210ENST00000494339 SHMT1P34896 483 aa24.13■■□□□ 1.45
KPNA1-210ENST00000494339 NUCB2P80303 420 aa24.13■■□□□ 1.45
KPNA1-210ENST00000494339 RAB3GAP1Q15042 981 aa24.13■■□□□ 1.45
KPNA1-210ENST00000494339 FAM151AQ8WW52 585 aa24.13■■□□□ 1.45
KPNA1-210ENST00000494339 CSRNP1Q96S65 589 aa24.13■■□□□ 1.45
KPNA1-210ENST00000494339 DNAJC18Q9H819 358 aa24.13■■□□□ 1.45
KPNA1-210ENST00000494339 SCAF8Q9UPN6 1271 aaKnown RBP24.13■■□□□ 1.45
KPNA1-210ENST00000494339 FKBP1CQ5VVH2 108 aa24.12■■□□□ 1.45
KPNA1-210ENST00000494339 ZNF654Q8IZM8 581 aa24.12■■□□□ 1.45
KPNA1-210ENST00000494339 TRIM34Q9BYJ4 488 aa24.12■■□□□ 1.45
KPNA1-210ENST00000494339 COL2A1P02458 1487 aaPredicted RBP24.12■■□□□ 1.45
KPNA1-210ENST00000494339 ASTN2O75129 1339 aaPredicted RBP24.12■■□□□ 1.45
KPNA1-210ENST00000494339 PPFIA3O75145 1194 aa24.12■■□□□ 1.45
KPNA1-210ENST00000494339 CTDNEP1O95476 244 aa24.12■■□□□ 1.45
KPNA1-210ENST00000494339 TMEM39BQ9GZU3 492 aa24.12■■□□□ 1.45
KPNA1-210ENST00000494339 GOLGA8AA7E2F4 631 aa24.11■■□□□ 1.45
KPNA1-210ENST00000494339 RCSD1Q6JBY9 416 aa24.11■■□□□ 1.45
KPNA1-210ENST00000494339 NSUN7Q8NE18 718 aaKnown RBP24.11■■□□□ 1.45
KPNA1-210ENST00000494339 NEDD1Q8NHV4 660 aa24.11■■□□□ 1.45
KPNA1-210ENST00000494339 NUP133Q8WUM0 1156 aa24.11■■□□□ 1.45
KPNA1-210ENST00000494339 DDX11Q96FC9 970 aa24.11■■□□□ 1.45
KPNA1-210ENST00000494339 TCP11L1Q9NUJ3 509 aa24.11■■□□□ 1.45
KPNA1-210ENST00000494339 AKR1B1P15121 316 aa24.1■■□□□ 1.45
KPNA1-210ENST00000494339 EPS15P42566 896 aa24.1■■□□□ 1.45
KPNA1-210ENST00000494339 FOXP4Q8IVH2 680 aaPredicted RBP24.1■■□□□ 1.45
KPNA1-210ENST00000494339 LLPHQ9BRT6 129 aaKnown RBP24.1■■□□□ 1.45
KPNA1-210ENST00000494339 PTPDC1A2A3K4 754 aa24.1■■□□□ 1.45
KPNA1-210ENST00000494339 CPLX1O14810 134 aa24.1■■□□□ 1.45
KPNA1-210ENST00000494339 DHX16O60231 1041 aaKnown RBP24.1■■□□□ 1.45
KPNA1-210ENST00000494339 GRIN3BO60391 1043 aa24.1■■□□□ 1.45
KPNA1-210ENST00000494339 FAM83AQ86UY5 434 aa24.1■■□□□ 1.45
KPNA1-210ENST00000494339 TRPM4Q8TD43 1214 aa24.1■■□□□ 1.45
KPNA1-210ENST00000494339 CDC27P30260 824 aa24.09■■□□□ 1.45
KPNA1-210ENST00000494339 ADD1P35611 737 aaKnown RBP24.09■■□□□ 1.45
KPNA1-210ENST00000494339 CATIPQ7Z7H3 387 aa24.09■■□□□ 1.45
KPNA1-210ENST00000494339 DGKHQ86XP1 1220 aa24.09■■□□□ 1.45
KPNA1-210ENST00000494339 CDAN1Q8IWY9 1227 aa24.09■■□□□ 1.45
KPNA1-210ENST00000494339 CHMP4CQ96CF2 233 aa24.09■■□□□ 1.45
KPNA1-210ENST00000494339 STX8Q9UNK0 236 aa24.09■■□□□ 1.45
KPNA1-210ENST00000494339 CCDC178Q5BJE1 867 aa24.08■■□□□ 1.45
KPNA1-210ENST00000494339 SMARCC2Q8TAQ2 1214 aa24.08■■□□□ 1.45
KPNA1-210ENST00000494339 HACL1Q9UJ83 578 aa24.08■■□□□ 1.45
KPNA1-210ENST00000494339 TNNI2P48788 182 aa24.08■■□□□ 1.44
KPNA1-210ENST00000494339 CEP95Q96GE4 821 aa24.08■■□□□ 1.44
KPNA1-210ENST00000494339 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.08■■□□□ 1.44
KPNA1-210ENST00000494339 FAM217BQ9NTX9 383 aaPredicted RBP24.08■■□□□ 1.44
KPNA1-210ENST00000494339 MPHOSPH10O00566 681 aaKnown RBP24.07■■□□□ 1.44
KPNA1-210ENST00000494339 METTL16Q86W50 562 aaKnown RBP24.07■■□□□ 1.44
KPNA1-210ENST00000494339 KAT14Q9H8E8 782 aa24.07■■□□□ 1.44
KPNA1-210ENST00000494339 PLIN4Q96Q06 1357 aa24.06■■□□□ 1.44
KPNA1-210ENST00000494339 SYT1P21579 422 aa24.06■■□□□ 1.44
KPNA1-210ENST00000494339 TNFAIP1Q13829 316 aa24.06■■□□□ 1.44
KPNA1-210ENST00000494339 RASA3Q14644 834 aa24.06■■□□□ 1.44
KPNA1-210ENST00000494339 RTN1Q16799 776 aa24.06■■□□□ 1.44
KPNA1-210ENST00000494339 FOXD4L5Q5VV16 416 aaPredicted RBP24.06■■□□□ 1.44
KPNA1-210ENST00000494339 FANCBQ8NB91 859 aa24.06■■□□□ 1.44
KPNA1-210ENST00000494339 FOXD4L4Q8WXT5 416 aaPredicted RBP24.06■■□□□ 1.44
KPNA1-210ENST00000494339 ZDHHC9Q9Y397 364 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms