RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 MAGEB6P1A0A0J9YX57 407 aa11.84□□□□□ -0.51
UFD1-210ENST00000494054 CHGBP05060 677 aa11.84□□□□□ -0.51
UFD1-210ENST00000494054 HOXD10P28358 340 aa11.84□□□□□ -0.51
UFD1-210ENST00000494054 PLCD1P51178 756 aa11.84□□□□□ -0.51
UFD1-210ENST00000494054 FCGRTP55899 365 aa11.84□□□□□ -0.51
UFD1-210ENST00000494054 BACE1P56817 501 aa11.84□□□□□ -0.51
UFD1-210ENST00000494054 MTMR2Q13614 643 aa11.84□□□□□ -0.51
UFD1-210ENST00000494054 MTFR1Q15390 333 aa11.84□□□□□ -0.51
UFD1-210ENST00000494054 TATDN1Q6P1N9 297 aa11.84□□□□□ -0.51
UFD1-210ENST00000494054 CERS3Q8IU89 383 aa11.84□□□□□ -0.51
UFD1-210ENST00000494054 LCORLQ8N3X6 602 aa11.84□□□□□ -0.51
UFD1-210ENST00000494054 ANKRD13CQ8N6S4 541 aa11.84□□□□□ -0.51
UFD1-210ENST00000494054 TMEM106CQ9BVX2 250 aa11.84□□□□□ -0.51
UFD1-210ENST00000494054 LRRCC1Q9C099 1032 aa11.84□□□□□ -0.51
UFD1-210ENST00000494054 PAG1Q9NWQ8 432 aa11.84□□□□□ -0.51
UFD1-210ENST00000494054 LOC285556D6RIA3 1793 aa11.83□□□□□ -0.52
UFD1-210ENST00000494054 RBBP6Q7Z6E9 1792 aaKnown RBP11.83□□□□□ -0.52
UFD1-210ENST00000494054 GH2P01242 217 aa11.83□□□□□ -0.52
UFD1-210ENST00000494054 TTC6Q86TZ1 520 aa11.83□□□□□ -0.52
UFD1-210ENST00000494054 RAET1EQ8TD07 263 aa11.83□□□□□ -0.52
UFD1-210ENST00000494054 HAUS7Q99871 368 aa11.83□□□□□ -0.52
UFD1-210ENST00000494054 ASCC2Q9H1I8 757 aaPredicted RBP11.83□□□□□ -0.52
UFD1-210ENST00000494054 EHD4Q9H223 541 aa11.83□□□□□ -0.52
UFD1-210ENST00000494054 EMILIN3Q9NT22 766 aa11.83□□□□□ -0.52
UFD1-210ENST00000494054 GINM1Q9NU53 330 aa11.83□□□□□ -0.52
UFD1-210ENST00000494054 SERPINB13Q9UIV8 391 aa11.83□□□□□ -0.52
UFD1-210ENST00000494054 PNMA3Q9UL41 463 aa11.83□□□□□ -0.52
UFD1-210ENST00000494054 MYH1P12882 1939 aa11.83□□□□□ -0.52
UFD1-210ENST00000494054 PRKAB2O43741 272 aa11.82□□□□□ -0.52
UFD1-210ENST00000494054 PEX10O60683 326 aa11.82□□□□□ -0.52
UFD1-210ENST00000494054 GRK4P32298 578 aa11.82□□□□□ -0.52
UFD1-210ENST00000494054 SHMT1P34896 483 aa11.82□□□□□ -0.52
UFD1-210ENST00000494054 ADD2P35612 726 aa11.82□□□□□ -0.52
UFD1-210ENST00000494054 FLT3LGP49771 235 aa11.82□□□□□ -0.52
UFD1-210ENST00000494054 SDR42E1Q8WUS8 393 aa11.82□□□□□ -0.52
UFD1-210ENST00000494054 P2RX7Q99572 595 aaKnown RBP11.82□□□□□ -0.52
UFD1-210ENST00000494054 CRNKL1Q9BZJ0 848 aaKnown RBP11.82□□□□□ -0.52
UFD1-210ENST00000494054 DCTPP1Q9H773 170 aa11.82□□□□□ -0.52
UFD1-210ENST00000494054 ARMT1Q9H993 441 aa11.82□□□□□ -0.52
UFD1-210ENST00000494054 MGAMO43451 1857 aa11.81□□□□□ -0.52
UFD1-210ENST00000494054 C19orf81C9J6K1 198 aa11.81□□□□□ -0.52
UFD1-210ENST00000494054 USP17L10C9JJH3 530 aa11.81□□□□□ -0.52
UFD1-210ENST00000494054 TNPO2O14787 897 aaKnown RBP11.81□□□□□ -0.52
UFD1-210ENST00000494054 POLR3DP05423 398 aaPredicted RBP11.81□□□□□ -0.52
UFD1-210ENST00000494054 CYP2D6P10635 497 aa11.81□□□□□ -0.52
UFD1-210ENST00000494054 HOXA7P31268 230 aaPredicted RBP11.81□□□□□ -0.52
UFD1-210ENST00000494054 GCLCP48506 637 aaPredicted RBP11.81□□□□□ -0.52
UFD1-210ENST00000494054 GABPAQ06546 454 aa11.81□□□□□ -0.52
UFD1-210ENST00000494054 PABPC4Q13310 644 aaKnown RBP eCLIP11.81□□□□□ -0.52
UFD1-210ENST00000494054 FAM110CQ1W6H9 321 aa11.81□□□□□ -0.52
UFD1-210ENST00000494054 CERKLQ49MI3 558 aaPredicted RBP11.81□□□□□ -0.52
UFD1-210ENST00000494054 DCP1AQ9NPI6 582 aaPredicted RBP11.81□□□□□ -0.52
UFD1-210ENST00000494054 MCM9Q9NXL9 1143 aa11.81□□□□□ -0.52
UFD1-210ENST00000494054 TMOD4Q9NZQ9 345 aa11.81□□□□□ -0.52
UFD1-210ENST00000494054 PCDHB15Q9Y5E8 787 aa11.81□□□□□ -0.52
UFD1-210ENST00000494054 DDX60LQ5H9U9 1706 aaKnown RBP11.8□□□□□ -0.52
UFD1-210ENST00000494054 SMIM22K7EJ46 135 aa11.8□□□□□ -0.52
UFD1-210ENST00000494054 ADCY3O60266 1144 aa11.8□□□□□ -0.52
UFD1-210ENST00000494054 MBD4O95243 580 aa11.8□□□□□ -0.52
UFD1-210ENST00000494054 ELNP15502 786 aa11.8□□□□□ -0.52
UFD1-210ENST00000494054 GUCY1A2P33402 732 aa11.8□□□□□ -0.52
UFD1-210ENST00000494054 RAB3GAP1Q15042 981 aa11.8□□□□□ -0.52
UFD1-210ENST00000494054 ABCB5Q2M3G0 1257 aa11.8□□□□□ -0.52
UFD1-210ENST00000494054 PRPF38BQ5VTL8 546 aaKnown RBP11.8□□□□□ -0.52
UFD1-210ENST00000494054 POTEEQ6S8J3 1075 aa11.8□□□□□ -0.52
UFD1-210ENST00000494054 ACER1Q8TDN7 264 aa11.8□□□□□ -0.52
UFD1-210ENST00000494054 TXNRD2Q9NNW7 524 aa11.8□□□□□ -0.52
UFD1-210ENST00000494054 MORF4L1Q9UBU8 362 aa11.8□□□□□ -0.52
UFD1-210ENST00000494054 CCL5P13501 91 aa11.79□□□□□ -0.52
UFD1-210ENST00000494054 HERVK_113P62684 666 aa11.79□□□□□ -0.52
UFD1-210ENST00000494054 IRX3P78415 501 aaPredicted RBP11.79□□□□□ -0.52
UFD1-210ENST00000494054 IRF5Q13568 498 aa11.79□□□□□ -0.52
UFD1-210ENST00000494054 ZYXQ15942 572 aaKnown RBP11.79□□□□□ -0.52
UFD1-210ENST00000494054 TSHZ3Q63HK5 1081 aa11.79□□□□□ -0.52
UFD1-210ENST00000494054 USP17L2Q6R6M4 530 aa11.79□□□□□ -0.52
UFD1-210ENST00000494054 SLC44A5Q8NCS7 719 aa11.79□□□□□ -0.52
UFD1-210ENST00000494054 SLAIN1Q8ND83 568 aa11.79□□□□□ -0.52
UFD1-210ENST00000494054 SHISA4Q96DD7 197 aa11.79□□□□□ -0.52
UFD1-210ENST00000494054 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.79□□□□□ -0.522e-8■■■□□ 14.9
UFD1-210ENST00000494054 ECHDC1Q9NTX5 307 aa11.79□□□□□ -0.52
UFD1-210ENST00000494054 RBPJLQ9UBG7 517 aa11.79□□□□□ -0.52
UFD1-210ENST00000494054 BIN2Q9UBW5 565 aaPredicted RBP11.79□□□□□ -0.52
UFD1-210ENST00000494054 GJD2Q9UKL4 321 aa11.79□□□□□ -0.52
UFD1-210ENST00000494054 NAV1Q8NEY1 1877 aa11.78□□□□□ -0.52
UFD1-210ENST00000494054 DOCK3Q8IZD9 2030 aa11.78□□□□□ -0.52
UFD1-210ENST00000494054 CYP2D7A0A087X1C5 515 aa11.78□□□□□ -0.52
UFD1-210ENST00000494054 RRP1P56182 461 aaKnown RBP11.78□□□□□ -0.52
UFD1-210ENST00000494054 SEPT2Q15019 361 aa11.78□□□□□ -0.52
UFD1-210ENST00000494054 UBE3CQ15386 1083 aa11.78□□□□□ -0.52
UFD1-210ENST00000494054 Q3C1V9 767 aa11.78□□□□□ -0.52
UFD1-210ENST00000494054 PXYLP1Q8TE99 480 aa11.78□□□□□ -0.52
UFD1-210ENST00000494054 COA7Q96BR5 231 aa11.78□□□□□ -0.52
UFD1-210ENST00000494054 DYNLL2Q96FJ2 89 aa11.78□□□□□ -0.52
UFD1-210ENST00000494054 C12orf42Q96LP6 360 aa11.78□□□□□ -0.52
UFD1-210ENST00000494054 PUS7LQ9H0K6 701 aaKnown RBP11.78□□□□□ -0.52
UFD1-210ENST00000494054 UNC93B1Q9H1C4 597 aa11.78□□□□□ -0.52
UFD1-210ENST00000494054 CABP5Q9NP86 173 aa11.78□□□□□ -0.52
UFD1-210ENST00000494054 TAOK2Q9UL54 1235 aa11.78□□□□□ -0.52
UFD1-210ENST00000494054 CENPFP49454 3210 aa11.77□□□□□ -0.52
UFD1-210ENST00000494054 INHAP05111 366 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms