RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 KDM2BQ8NHM5 1336 aa8.86□□□□□ -0.99
SMC2-205ENST00000493955 CHURC1-FNTBB4DL54 471 aa8.86□□□□□ -0.99
SMC2-205ENST00000493955 YARSP54577 528 aaKnown RBP8.86□□□□□ -0.99
SMC2-205ENST00000493955 SSRP1Q08945 709 aaKnown RBP8.86□□□□□ -0.99
SMC2-205ENST00000493955 AKAP4Q5JQC9 854 aa8.86□□□□□ -0.99
SMC2-205ENST00000493955 TRAPPC3LQ5T215 181 aa8.86□□□□□ -0.99
SMC2-205ENST00000493955 SPATC1Q76KD6 591 aa8.86□□□□□ -0.99
SMC2-205ENST00000493955 MCATQ8IVS2 390 aaKnown RBP8.86□□□□□ -0.99
SMC2-205ENST00000493955 SLFN12Q8IYM2 578 aa8.86□□□□□ -0.99
SMC2-205ENST00000493955 JMYQ8N9B5 988 aa8.86□□□□□ -0.99
SMC2-205ENST00000493955 FAM13CQ8NE31 585 aa8.86□□□□□ -0.99
SMC2-205ENST00000493955 TMPRSS13Q9BYE2 586 aa8.86□□□□□ -0.99
SMC2-205ENST00000493955 CRIM1Q9NZV1 1036 aa8.86□□□□□ -0.99
SMC2-205ENST00000493955 ZMYM5Q9UJ78 669 aa8.86□□□□□ -0.99
SMC2-205ENST00000493955 FAM86C2PA6NEL3 165 aa8.85□□□□□ -0.99
SMC2-205ENST00000493955 DIAPH1O60610 1272 aaKnown RBP8.85□□□□□ -0.99
SMC2-205ENST00000493955 CELA2BP08218 269 aaPredicted RBP8.85□□□□□ -0.99
SMC2-205ENST00000493955 SQSTM1Q13501 440 aa8.85□□□□□ -0.99
SMC2-205ENST00000493955 PTPROQ16827 1216 aa8.85□□□□□ -0.99
SMC2-205ENST00000493955 GPAT2Q6NUI2 795 aa8.85□□□□□ -0.99
SMC2-205ENST00000493955 FBXO11Q86XK2 927 aa8.85□□□□□ -0.99
SMC2-205ENST00000493955 GPATCH3Q96I76 525 aa8.85□□□□□ -0.99
SMC2-205ENST00000493955 TMEM87BQ96K49 555 aa8.85□□□□□ -0.99
SMC2-205ENST00000493955 RUSC1Q9BVN2 902 aa8.85□□□□□ -0.99
SMC2-205ENST00000493955 TJP2Q9UDY2 1190 aa8.85□□□□□ -0.99
SMC2-205ENST00000493955 PPP1R9AQ9ULJ8 1098 aa8.85□□□□□ -0.99
SMC2-205ENST00000493955 LEMD3Q9Y2U8 911 aa8.85□□□□□ -0.99
SMC2-205ENST00000493955 DLL1O00548 723 aa8.84□□□□□ -0.99
SMC2-205ENST00000493955 NTF4P34130 210 aa8.84□□□□□ -0.99
SMC2-205ENST00000493955 CCNFP41002 786 aa8.84□□□□□ -0.99
SMC2-205ENST00000493955 RAC1P63000 192 aa8.84□□□□□ -0.99
SMC2-205ENST00000493955 LYPD4Q6UWN0 246 aa8.84□□□□□ -0.99
SMC2-205ENST00000493955 KIAA0907Q7Z7F0 614 aaPredicted RBP8.84□□□□□ -0.99
SMC2-205ENST00000493955 HID1Q8IV36 788 aa8.84□□□□□ -0.99
SMC2-205ENST00000493955 MRPL41Q8IXM3 137 aaKnown RBP8.84□□□□□ -0.99
SMC2-205ENST00000493955 FMR1NBQ8N0W7 255 aaPredicted RBP8.84□□□□□ -0.99
SMC2-205ENST00000493955 RNF214Q8ND24 703 aa8.84□□□□□ -0.99
SMC2-205ENST00000493955 ATXN3LQ9H3M9 355 aa8.84□□□□□ -0.99
SMC2-205ENST00000493955 PCDHB10Q9UN67 800 aa8.84□□□□□ -0.99
SMC2-205ENST00000493955 A0A0A0MRY4 1105 aa8.83□□□□□ -1
SMC2-205ENST00000493955 POLR2BP30876 1174 aaKnown RBP8.83□□□□□ -1
SMC2-205ENST00000493955 SLC7A5Q01650 507 aa8.83□□□□□ -1
SMC2-205ENST00000493955 SLC6A19Q695T7 634 aa8.83□□□□□ -1
SMC2-205ENST00000493955 KIAA1211LQ6NV74 962 aa8.83□□□□□ -1
SMC2-205ENST00000493955 C16orf86Q6ZW13 317 aa8.83□□□□□ -1
SMC2-205ENST00000493955 ZNF507Q8TCN5 953 aa8.83□□□□□ -1
SMC2-205ENST00000493955 FANCD2OSQ96PS1 177 aa8.83□□□□□ -1
SMC2-205ENST00000493955 RNF208Q9H0X6 261 aa8.83□□□□□ -1
SMC2-205ENST00000493955 EPN3Q9H201 632 aa8.83□□□□□ -1
SMC2-205ENST00000493955 ZNF214Q9UL59 606 aaPredicted RBP8.83□□□□□ -1
SMC2-205ENST00000493955 AP4E1Q9UPM8 1137 aa8.83□□□□□ -1
SMC2-205ENST00000493955 PRKAB1Q9Y478 270 aa8.83□□□□□ -1
SMC2-205ENST00000493955 PTCH2Q9Y6C5 1203 aa8.83□□□□□ -1
SMC2-205ENST00000493955 MEGF11A6BM72 1044 aa8.82□□□□□ -1
SMC2-205ENST00000493955 SUSD5O60279 629 aa8.82□□□□□ -1
SMC2-205ENST00000493955 WISP1O95388 367 aa8.82□□□□□ -1
SMC2-205ENST00000493955 HOXB4P17483 251 aaPredicted RBP8.82□□□□□ -1
SMC2-205ENST00000493955 TAF7LQ5H9L4 462 aa8.82□□□□□ -1
SMC2-205ENST00000493955 NUTM2GQ5VZR2 741 aa8.82□□□□□ -1
SMC2-205ENST00000493955 FILIP1Q7Z7B0 1213 aa8.82□□□□□ -1
SMC2-205ENST00000493955 PHACTR4Q8IZ21 702 aa8.82□□□□□ -1
SMC2-205ENST00000493955 ZCRB1Q8TBF4 217 aaKnown RBP8.82□□□□□ -1
SMC2-205ENST00000493955 KLHL6Q8WZ60 621 aa8.82□□□□□ -1
SMC2-205ENST00000493955 FEZ1Q99689 392 aa8.82□□□□□ -1
SMC2-205ENST00000493955 BRINP2Q9C0B6 783 aa8.82□□□□□ -1
SMC2-205ENST00000493955 TMX1Q9H3N1 280 aa8.82□□□□□ -1
SMC2-205ENST00000493955 SUGCTQ9HAC7 445 aa8.82□□□□□ -1
SMC2-205ENST00000493955 CYP4F12Q9HCS2 524 aa8.82□□□□□ -1
SMC2-205ENST00000493955 DISC1Q9NRI5 854 aa8.82□□□□□ -1
SMC2-205ENST00000493955 ADH5P11766 374 aa8.81□□□□□ -1
SMC2-205ENST00000493955 IBSPP21815 317 aaPredicted RBP8.81□□□□□ -1
SMC2-205ENST00000493955 SLC10A6Q3KNW5 377 aa8.81□□□□□ -1
SMC2-205ENST00000493955 BBS9Q3SYG4 887 aa8.81□□□□□ -1
SMC2-205ENST00000493955 GNPTABQ3T906 1256 aa8.81□□□□□ -1
SMC2-205ENST00000493955 ZNF385CQ66K41 422 aaPredicted RBP8.81□□□□□ -1
SMC2-205ENST00000493955 ACAD11Q709F0 780 aa8.81□□□□□ -1
SMC2-205ENST00000493955 KCT2Q8NC54 265 aa8.81□□□□□ -1
SMC2-205ENST00000493955 DHRS1Q96LJ7 313 aa8.81□□□□□ -1
SMC2-205ENST00000493955 FBRSQ9HAH7 460 aa8.81□□□□□ -1
SMC2-205ENST00000493955 RRAGCQ9HB90 399 aa8.81□□□□□ -1
SMC2-205ENST00000493955 hCG_2014768A0A024R1R8 64 aa8.8□□□□□ -1
SMC2-205ENST00000493955 RGS13O14921 159 aa8.8□□□□□ -1
SMC2-205ENST00000493955 PPP1R12AO14974 1030 aaPredicted RBP8.8□□□□□ -1
SMC2-205ENST00000493955 DNAJC6O75061 913 aa8.8□□□□□ -1
SMC2-205ENST00000493955 KIAA1211Q6ZU35 1233 aa8.8□□□□□ -1
SMC2-205ENST00000493955 SVOPQ8N4V2 548 aa8.8□□□□□ -1
SMC2-205ENST00000493955 SMG8Q8ND04 991 aaKnown RBP8.8□□□□□ -1
SMC2-205ENST00000493955 SPC25Q9HBM1 224 aa8.8□□□□□ -1
SMC2-205ENST00000493955 IFT57Q9NWB7 429 aa8.8□□□□□ -1
SMC2-205ENST00000493955 IQCA1LA6NCM1 817 aa8.8□□□□□ -1
SMC2-205ENST00000493955 NEFMP07197 916 aa8.8□□□□□ -1
SMC2-205ENST00000493955 HCLS1P14317 486 aaPredicted RBP8.8□□□□□ -1
SMC2-205ENST00000493955 PMS1P54277 932 aaKnown RBP8.8□□□□□ -1
SMC2-205ENST00000493955 TTLL4Q14679 1199 aa8.8□□□□□ -1
SMC2-205ENST00000493955 NKG7Q16617 165 aa8.8□□□□□ -1
SMC2-205ENST00000493955 CDC37L1Q7L3B6 337 aa8.8□□□□□ -1
SMC2-205ENST00000493955 LRRC47Q8N1G4 583 aaKnown RBP8.8□□□□□ -1
SMC2-205ENST00000493955 SYNPOQ8N3V7 929 aa8.8□□□□□ -1
SMC2-205ENST00000493955 ZSWIM2Q8NEG5 633 aa8.8□□□□□ -1
SMC2-205ENST00000493955 SLC6A18Q96N87 628 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms