RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 LDHCP07864 332 aa9.89□□□□□ -0.83
HDAC6-234ENST00000493923 C20orf194Q5TEA3 1177 aa9.89□□□□□ -0.83
HDAC6-234ENST00000493923 NAA16Q6N069 864 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-234ENST00000493923 SLF2Q8IX21 1173 aa9.89□□□□□ -0.83
HDAC6-234ENST00000493923 TGFBRAP1Q8WUH2 860 aa9.89□□□□□ -0.83
HDAC6-234ENST00000493923 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.89□□□□□ -0.83
HDAC6-234ENST00000493923 IL1RAPL2Q9NP60 686 aa9.89□□□□□ -0.83
HDAC6-234ENST00000493923 PICK1Q9NRD5 415 aa9.89□□□□□ -0.83
HDAC6-234ENST00000493923 SAP30BPQ9UHR5 308 aaKnown RBP9.89□□□□□ -0.83
HDAC6-234ENST00000493923 COL2A1P02458 1487 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-234ENST00000493923 MYH1P12882 1939 aa9.89□□□□□ -0.83
HDAC6-234ENST00000493923 FLT1P17948 1338 aa9.88□□□□□ -0.83
HDAC6-234ENST00000493923 SLC34A2O95436 690 aa9.88□□□□□ -0.83
HDAC6-234ENST00000493923 RRP1P56182 461 aaKnown RBP9.88□□□□□ -0.83
HDAC6-234ENST00000493923 PPP4CP60510 307 aa9.88□□□□□ -0.83
HDAC6-234ENST00000493923 GSTO1P78417 241 aa9.88□□□□□ -0.83
HDAC6-234ENST00000493923 SLFNL1Q499Z3 407 aa9.88□□□□□ -0.83
HDAC6-234ENST00000493923 SLC9C1Q4G0N8 1177 aa9.88□□□□□ -0.83
HDAC6-234ENST00000493923 MIGA1Q8NAN2 632 aa9.88□□□□□ -0.83
HDAC6-234ENST00000493923 SHISA4Q96DD7 197 aa9.88□□□□□ -0.83
HDAC6-234ENST00000493923 ZNF512BQ96KM6 892 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-234ENST00000493923 SRRDQ9UH36 339 aa9.88□□□□□ -0.83
HDAC6-234ENST00000493923 PALD1Q9ULE6 856 aa9.88□□□□□ -0.83
HDAC6-234ENST00000493923 COG6Q9Y2V7 657 aa9.88□□□□□ -0.83
HDAC6-234ENST00000493923 APBB1O00213 710 aa9.87□□□□□ -0.83
HDAC6-234ENST00000493923 GDF11O95390 407 aa9.87□□□□□ -0.83
HDAC6-234ENST00000493923 CHGBP05060 677 aa9.87□□□□□ -0.83
HDAC6-234ENST00000493923 CYP7A1P22680 504 aa9.87□□□□□ -0.83
HDAC6-234ENST00000493923 CAP2P40123 477 aa9.87□□□□□ -0.83
HDAC6-234ENST00000493923 PRKCZQ05513 592 aa9.87□□□□□ -0.83
HDAC6-234ENST00000493923 SPP2Q13103 211 aa9.87□□□□□ -0.83
HDAC6-234ENST00000493923 BECN1Q14457 450 aa9.87□□□□□ -0.83
HDAC6-234ENST00000493923 CCDC158Q5M9N0 1113 aa9.87□□□□□ -0.83
HDAC6-234ENST00000493923 PRPF38BQ5VTL8 546 aaKnown RBP9.87□□□□□ -0.83
HDAC6-234ENST00000493923 AACSQ86V21 672 aa9.87□□□□□ -0.83
HDAC6-234ENST00000493923 SMAP1Q8IYB5 467 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-234ENST00000493923 EDC3Q96F86 508 aaKnown RBP9.87□□□□□ -0.83
HDAC6-234ENST00000493923 PLXNB2O15031 1838 aa9.86□□□□□ -0.83
HDAC6-234ENST00000493923 GOLGA6L3A6NEY3 463 aa9.86□□□□□ -0.83
HDAC6-234ENST00000493923 IDH1O75874 414 aaKnown RBP9.86□□□□□ -0.83
HDAC6-234ENST00000493923 FMNL1O95466 1100 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-234ENST00000493923 PDIA4P13667 645 aaKnown RBP9.86□□□□□ -0.83
HDAC6-234ENST00000493923 RANBP2P49792 3224 aaKnown RBP9.86□□□□□ -0.83
HDAC6-234ENST00000493923 HMGCS2P54868 508 aa9.86□□□□□ -0.83
HDAC6-234ENST00000493923 POTEEQ6S8J3 1075 aa9.86□□□□□ -0.83
HDAC6-234ENST00000493923 MAGEB6Q8N7X4 407 aa9.86□□□□□ -0.83
HDAC6-234ENST00000493923 RHPN1Q8TCX5 695 aa9.86□□□□□ -0.83
HDAC6-234ENST00000493923 PARK7Q99497 189 aaKnown RBP9.86□□□□□ -0.83
HDAC6-234ENST00000493923 ZBTB40Q9NUA8 1239 aa9.86□□□□□ -0.83
HDAC6-234ENST00000493923 MYPNQ86TC9 1320 aa9.85□□□□□ -0.83
HDAC6-234ENST00000493923 DDX60LQ5H9U9 1706 aaKnown RBP9.85□□□□□ -0.83
HDAC6-234ENST00000493923 SMIM22K7EJ46 135 aa9.85□□□□□ -0.83
HDAC6-234ENST00000493923 MAP4K4O95819 1239 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-234ENST00000493923 ELNP15502 786 aa9.85□□□□□ -0.83
HDAC6-234ENST00000493923 KIF22Q14807 665 aa9.85□□□□□ -0.83
HDAC6-234ENST00000493923 FASTKD5Q7L8L6 764 aaKnown RBP9.85□□□□□ -0.83
HDAC6-234ENST00000493923 METTL16Q86W50 562 aaKnown RBP9.85□□□□□ -0.83
HDAC6-234ENST00000493923 ZNF280CQ8ND82 737 aa9.85□□□□□ -0.83
HDAC6-234ENST00000493923 AGTPBP1Q9UPW5 1226 aa9.85□□□□□ -0.83
HDAC6-234ENST00000493923 USP17L5A8MUK1 530 aa9.84□□□□□ -0.83
HDAC6-234ENST00000493923 GRK4P32298 578 aa9.84□□□□□ -0.83
HDAC6-234ENST00000493923 ANKRD13CQ8N6S4 541 aa9.84□□□□□ -0.83
HDAC6-234ENST00000493923 RIOK1Q9BRS2 568 aaKnown RBP9.84□□□□□ -0.83
HDAC6-234ENST00000493923 ASCC2Q9H1I8 757 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-234ENST00000493923 PI4KBQ9UBF8 816 aa9.84□□□□□ -0.83
HDAC6-234ENST00000493923 SLC45A1Q9Y2W3 748 aa9.84□□□□□ -0.83
HDAC6-234ENST00000493923 NAV1Q8NEY1 1877 aa9.83□□□□□ -0.84
HDAC6-234ENST00000493923 TCRBV5S4A2TA0A5A2 114 aa9.83□□□□□ -0.84
HDAC6-234ENST00000493923 SMARCA5O60264 1052 aaPredicted RBP9.83□□□□□ -0.84
HDAC6-234ENST00000493923 BAG3O95817 575 aa9.83□□□□□ -0.84
HDAC6-234ENST00000493923 CYP2D6P10635 497 aa9.83□□□□□ -0.84
HDAC6-234ENST00000493923 CCL5P13501 91 aa9.83□□□□□ -0.84
HDAC6-234ENST00000493923 PDE6AP16499 860 aa9.83□□□□□ -0.84
HDAC6-234ENST00000493923 FLT3LGP49771 235 aa9.83□□□□□ -0.84
HDAC6-234ENST00000493923 MRE11P49959 708 aa9.83□□□□□ -0.84
HDAC6-234ENST00000493923 PLCD1P51178 756 aa9.83□□□□□ -0.84
HDAC6-234ENST00000493923 TRIM32Q13049 653 aa9.83□□□□□ -0.84
HDAC6-234ENST00000493923 MTMR2Q13614 643 aa9.83□□□□□ -0.84
HDAC6-234ENST00000493923 ARHGEF6Q15052 776 aa9.83□□□□□ -0.84
HDAC6-234ENST00000493923 SH3D19Q5HYK7 790 aa9.83□□□□□ -0.84
HDAC6-234ENST00000493923 RAET1EQ8TD07 263 aa9.83□□□□□ -0.84
HDAC6-234ENST00000493923 P2RX7Q99572 595 aaKnown RBP9.83□□□□□ -0.84
HDAC6-234ENST00000493923 WDR18Q9BV38 432 aa9.83□□□□□ -0.84
HDAC6-234ENST00000493923 TMEM106CQ9BVX2 250 aa9.83□□□□□ -0.84
HDAC6-234ENST00000493923 UNC93B1Q9H1C4 597 aa9.83□□□□□ -0.84
HDAC6-234ENST00000493923 TXNRD2Q9NNW7 524 aa9.83□□□□□ -0.84
HDAC6-234ENST00000493923 HERC5Q9UII4 1024 aaKnown RBP9.83□□□□□ -0.84
HDAC6-234ENST00000493923 RCAN3Q9UKA8 241 aa9.83□□□□□ -0.84
HDAC6-234ENST00000493923 ZBTB21Q9ULJ3 1066 aa9.83□□□□□ -0.84
HDAC6-234ENST00000493923 BAZ2AQ9UIF9 1905 aaKnown RBP9.83□□□□□ -0.84
HDAC6-234ENST00000493923 ALPK3Q96L96 1907 aa9.82□□□□□ -0.84
HDAC6-234ENST00000493923 GOLIM4O00461 696 aa9.82□□□□□ -0.84
HDAC6-234ENST00000493923 ADCY3O60266 1144 aa9.82□□□□□ -0.84
HDAC6-234ENST00000493923 GNRH1P01148 92 aa9.82□□□□□ -0.84
HDAC6-234ENST00000493923 GH2P01242 217 aa9.82□□□□□ -0.84
HDAC6-234ENST00000493923 PLCG2P16885 1265 aa9.82□□□□□ -0.84
HDAC6-234ENST00000493923 GUCY1A2P33402 732 aa9.82□□□□□ -0.84
HDAC6-234ENST00000493923 PRMT2P55345 433 aa9.82□□□□□ -0.84
HDAC6-234ENST00000493923 FCGRTP55899 365 aa9.82□□□□□ -0.84
HDAC6-234ENST00000493923 BACE1P56817 501 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms