RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 LAMB1P07942 1786 aa21.25■□□□□ 0.99
PDLIM7-208ENST00000493815 ZNF213O14771 459 aa21.25■□□□□ 0.99
PDLIM7-208ENST00000493815 GH2P01242 217 aa21.25■□□□□ 0.99
PDLIM7-208ENST00000493815 GJA5P36382 358 aa21.25■□□□□ 0.99
PDLIM7-208ENST00000493815 VEGFBP49765 207 aa21.25■□□□□ 0.99
PDLIM7-208ENST00000493815 NOL9Q5SY16 702 aaKnown RBP21.25■□□□□ 0.99
PDLIM7-208ENST00000493815 HHIPL1Q96JK4 782 aa21.25■□□□□ 0.99
PDLIM7-208ENST00000493815 CTNNA3Q9UI47 895 aa21.25■□□□□ 0.99
PDLIM7-208ENST00000493815 ANAPC4Q9UJX5 808 aa21.25■□□□□ 0.99
PDLIM7-208ENST00000493815 FAM155AB1AL88 458 aaPredicted RBP21.24■□□□□ 0.99
PDLIM7-208ENST00000493815 MPHOSPH10O00566 681 aaKnown RBP21.24■□□□□ 0.99
PDLIM7-208ENST00000493815 AKR1B1P15121 316 aa21.24■□□□□ 0.99
PDLIM7-208ENST00000493815 PTPRAP18433 802 aa21.24■□□□□ 0.99
PDLIM7-208ENST00000493815 RASA1P20936 1047 aa21.24■□□□□ 0.99
PDLIM7-208ENST00000493815 ABCB5Q2M3G0 1257 aa21.24■□□□□ 0.99
PDLIM7-208ENST00000493815 ZIC5Q96T25 663 aa21.24■□□□□ 0.99
PDLIM7-208ENST00000493815 TAF6LQ9Y6J9 622 aa21.24■□□□□ 0.99
PDLIM7-208ENST00000493815 U3KPZ7 1027 aaPredicted RBP21.24■□□□□ 0.99
PDLIM7-208ENST00000493815 UNCXA6NJT0 531 aa21.24■□□□□ 0.99
PDLIM7-208ENST00000493815 AOC2O75106 756 aa21.24■□□□□ 0.99
PDLIM7-208ENST00000493815 SLC3A2P08195 630 aaKnown RBP21.24■□□□□ 0.99
PDLIM7-208ENST00000493815 PDE4BQ07343 736 aa21.24■□□□□ 0.99
PDLIM7-208ENST00000493815 IMMTQ16891 758 aaKnown RBP21.24■□□□□ 0.99
PDLIM7-208ENST00000493815 WNK4Q96J92 1243 aa21.24■□□□□ 0.99
PDLIM7-208ENST00000493815 ZBTB21Q9ULJ3 1066 aa21.24■□□□□ 0.99
PDLIM7-208ENST00000493815 SLC10A3P09131 477 aa21.23■□□□□ 0.99
PDLIM7-208ENST00000493815 RAB3GAP1Q15042 981 aa21.23■□□□□ 0.99
PDLIM7-208ENST00000493815 TOMM22Q9NS69 142 aa21.23■□□□□ 0.99
PDLIM7-208ENST00000493815 ZHX2Q9Y6X8 837 aa21.23■□□□□ 0.99
PDLIM7-208ENST00000493815 SPDYE5A6NIY4 337 aa21.22■□□□□ 0.99
PDLIM7-208ENST00000493815 CYP21A2P08686 494 aa21.22■□□□□ 0.99
PDLIM7-208ENST00000493815 FAM47AQ5JRC9 791 aa21.22■□□□□ 0.99
PDLIM7-208ENST00000493815 RRP12Q5JTH9 1297 aaKnown RBP21.22■□□□□ 0.99
PDLIM7-208ENST00000493815 SPRYD7Q5W111 196 aa21.22■□□□□ 0.99
PDLIM7-208ENST00000493815 ERO1BQ86YB8 467 aa21.22■□□□□ 0.99
PDLIM7-208ENST00000493815 CLEC10AQ8IUN9 316 aa21.22■□□□□ 0.99
PDLIM7-208ENST00000493815 NKX2-3Q8TAU0 364 aa21.22■□□□□ 0.99
PDLIM7-208ENST00000493815 CCDC102AQ96A19 550 aa21.22■□□□□ 0.99
PDLIM7-208ENST00000493815 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.22■□□□□ 0.99
PDLIM7-208ENST00000493815 WDR33Q9C0J8 1336 aaKnown RBP21.22■□□□□ 0.99
PDLIM7-208ENST00000493815 ASNSP08243 561 aa21.21■□□□□ 0.99
PDLIM7-208ENST00000493815 GUCY1A2P33402 732 aa21.21■□□□□ 0.99
PDLIM7-208ENST00000493815 SEPT2Q15019 361 aa21.21■□□□□ 0.99
PDLIM7-208ENST00000493815 AKNAD1Q5T1N1 836 aa21.21■□□□□ 0.99
PDLIM7-208ENST00000493815 IRF6O14896 467 aa21.21■□□□□ 0.99
PDLIM7-208ENST00000493815 ZNF444Q8N0Y2 327 aaPredicted RBP21.21■□□□□ 0.99
PDLIM7-208ENST00000493815 DNAJC5GQ8N7S2 189 aa21.21■□□□□ 0.99
PDLIM7-208ENST00000493815 ZNF287Q9HBT7 754 aa21.21■□□□□ 0.99
PDLIM7-208ENST00000493815 CABP5Q9NP86 173 aa21.21■□□□□ 0.99
PDLIM7-208ENST00000493815 NEDD4P46934 1319 aa21.21■□□□□ 0.99
PDLIM7-208ENST00000493815 DOCK1Q14185 1865 aa21.2■□□□□ 0.98
PDLIM7-208ENST00000493815 RANBP6O60518 1105 aaKnown RBP21.2■□□□□ 0.98
PDLIM7-208ENST00000493815 ECE1P42892 770 aa21.2■□□□□ 0.98
PDLIM7-208ENST00000493815 PPATQ06203 517 aa21.2■□□□□ 0.98
PDLIM7-208ENST00000493815 MFSD6Q6ZSS7 791 aa21.2■□□□□ 0.98
PDLIM7-208ENST00000493815 STAG1Q8WVM7 1258 aa21.2■□□□□ 0.98
PDLIM7-208ENST00000493815 TAOK2Q9UL54 1235 aa21.2■□□□□ 0.98
PDLIM7-208ENST00000493815 TRIM75PA6NK02 468 aa21.19■□□□□ 0.98
PDLIM7-208ENST00000493815 USP17L5A8MUK1 530 aa21.19■□□□□ 0.98
PDLIM7-208ENST00000493815 REC8O95072 547 aa21.19■□□□□ 0.98
PDLIM7-208ENST00000493815 C8orf34Q49A92 452 aa21.19■□□□□ 0.98
PDLIM7-208ENST00000493815 CCDC17Q96LX7 622 aa21.19■□□□□ 0.98
PDLIM7-208ENST00000493815 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.19■□□□□ 0.98
PDLIM7-208ENST00000493815 SLC27A2O14975 620 aa21.18■□□□□ 0.98
PDLIM7-208ENST00000493815 SEC24BO95487 1268 aa21.18■□□□□ 0.98
PDLIM7-208ENST00000493815 FGRP09769 529 aa21.18■□□□□ 0.98
PDLIM7-208ENST00000493815 TFAP4Q01664 338 aa21.18■□□□□ 0.98
PDLIM7-208ENST00000493815 PPIL2Q13356 520 aa21.18■□□□□ 0.98
PDLIM7-208ENST00000493815 NECTIN1Q15223 517 aa21.18■□□□□ 0.98
PDLIM7-208ENST00000493815 CREB3L3Q68CJ9 461 aa21.18■□□□□ 0.98
PDLIM7-208ENST00000493815 AFG3L2Q9Y4W6 797 aa21.18■□□□□ 0.98
PDLIM7-208ENST00000493815 ATAD5Q96QE3 1844 aa21.18■□□□□ 0.98
PDLIM7-208ENST00000493815 ORC4O43929 436 aa21.18■□□□□ 0.98
PDLIM7-208ENST00000493815 TSPY3P0CV98 308 aa21.18■□□□□ 0.98
PDLIM7-208ENST00000493815 TSPY8P0CW00 308 aa21.18■□□□□ 0.98
PDLIM7-208ENST00000493815 ZBTB48P10074 688 aaPredicted RBP21.18■□□□□ 0.98
PDLIM7-208ENST00000493815 KIF23Q02241 960 aaPredicted RBP21.18■□□□□ 0.98
PDLIM7-208ENST00000493815 SPP2Q13103 211 aa21.18■□□□□ 0.98
PDLIM7-208ENST00000493815 TMEM179Q6ZVK1 233 aa21.18■□□□□ 0.98
PDLIM7-208ENST00000493815 MYH8P13535 1937 aa21.17■□□□□ 0.98
PDLIM7-208ENST00000493815 TSPY2A6NKD2 308 aa21.17■□□□□ 0.98
PDLIM7-208ENST00000493815 NMT2O60551 498 aa21.17■□□□□ 0.98
PDLIM7-208ENST00000493815 NOGQ13253 232 aa21.17■□□□□ 0.98
PDLIM7-208ENST00000493815 DGKZQ13574 1117 aa21.17■□□□□ 0.98
PDLIM7-208ENST00000493815 STOX1Q6ZVD7 989 aa21.17■□□□□ 0.98
PDLIM7-208ENST00000493815 ACER1Q8TDN7 264 aa21.17■□□□□ 0.98
PDLIM7-208ENST00000493815 RNF41Q9H4P4 317 aaPredicted RBP21.17■□□□□ 0.98
PDLIM7-208ENST00000493815 LAMA4Q16363 1823 aa21.17■□□□□ 0.98
PDLIM7-208ENST00000493815 B4E1Z4 1266 aa21.16■□□□□ 0.98
PDLIM7-208ENST00000493815 ZNF280CQ8ND82 737 aa21.16■□□□□ 0.98
PDLIM7-208ENST00000493815 E7EWF7 191 aa21.15■□□□□ 0.98
PDLIM7-208ENST00000493815 ATP2B2Q01814 1243 aa21.15■□□□□ 0.98
PDLIM7-208ENST00000493815 SIAH1Q8IUQ4 282 aa21.15■□□□□ 0.98
PDLIM7-208ENST00000493815 MS4A4AQ96JQ5 239 aa21.15■□□□□ 0.98
PDLIM7-208ENST00000493815 GINM1Q9NU53 330 aa21.15■□□□□ 0.98
PDLIM7-208ENST00000493815 KDM4AO75164 1064 aa21.15■□□□□ 0.98
PDLIM7-208ENST00000493815 ICA1Q05084 483 aa21.15■□□□□ 0.98
PDLIM7-208ENST00000493815 MTMR2Q13614 643 aa21.15■□□□□ 0.98
PDLIM7-208ENST00000493815 ZYXQ15942 572 aaKnown RBP21.15■□□□□ 0.98
PDLIM7-208ENST00000493815 RASEFQ8IZ41 740 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms