RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 GADL1Q6ZQY3 521 aa8.39□□□□□ -1.07
TOP3A-207ENST00000493648 PRRT2Q7Z6L0 340 aaPredicted RBP8.39□□□□□ -1.07
TOP3A-207ENST00000493648 CTU1Q7Z7A3 348 aaKnown RBP8.39□□□□□ -1.07
TOP3A-207ENST00000493648 CHD1LQ86WJ1 897 aa8.39□□□□□ -1.07
TOP3A-207ENST00000493648 ZNF280CQ8ND82 737 aa8.39□□□□□ -1.07
TOP3A-207ENST00000493648 SDR42E1Q8WUS8 393 aa8.39□□□□□ -1.07
TOP3A-207ENST00000493648 APPBP2Q92624 585 aa8.39□□□□□ -1.07
TOP3A-207ENST00000493648 EVI5LQ96CN4 794 aa8.39□□□□□ -1.07
TOP3A-207ENST00000493648 ERO1AQ96HE7 468 aa8.39□□□□□ -1.07
TOP3A-207ENST00000493648 FSD1Q9BTV5 496 aa8.39□□□□□ -1.07
TOP3A-207ENST00000493648 LNPKQ9C0E8 428 aa8.39□□□□□ -1.07
TOP3A-207ENST00000493648 MCOLN1Q9GZU1 580 aa8.39□□□□□ -1.07
TOP3A-207ENST00000493648 PUS7LQ9H0K6 701 aaKnown RBP8.39□□□□□ -1.07
TOP3A-207ENST00000493648 CABP5Q9NP86 173 aa8.39□□□□□ -1.07
TOP3A-207ENST00000493648 DCP1AQ9NPI6 582 aaPredicted RBP8.39□□□□□ -1.07
TOP3A-207ENST00000493648 TAOK2Q9UL54 1235 aa8.39□□□□□ -1.07
TOP3A-207ENST00000493648 DOCK1Q14185 1865 aa8.38□□□□□ -1.07
TOP3A-207ENST00000493648 SALL3Q9BXA9 1300 aa8.38□□□□□ -1.07
TOP3A-207ENST00000493648 PRKAB2O43741 272 aa8.38□□□□□ -1.07
TOP3A-207ENST00000493648 TLR2O60603 784 aa8.38□□□□□ -1.07
TOP3A-207ENST00000493648 GDF11O95390 407 aa8.38□□□□□ -1.07
TOP3A-207ENST00000493648 CHGBP05060 677 aa8.38□□□□□ -1.07
TOP3A-207ENST00000493648 NUCB1Q02818 461 aa8.38□□□□□ -1.07
TOP3A-207ENST00000493648 PABPC4Q13310 644 aaKnown RBP eCLIP8.38□□□□□ -1.071e-10■■□□□ 14.2
TOP3A-207ENST00000493648 TICAM2Q86XR7 235 aa8.38□□□□□ -1.07
TOP3A-207ENST00000493648 STRBPQ96SI9 672 aaKnown RBP8.38□□□□□ -1.07
TOP3A-207ENST00000493648 WDR18Q9BV38 432 aa8.38□□□□□ -1.07
TOP3A-207ENST00000493648 SWAP70Q9UH65 585 aa8.38□□□□□ -1.07
TOP3A-207ENST00000493648 SLC45A1Q9Y2W3 748 aa8.38□□□□□ -1.07
TOP3A-207ENST00000493648 TRIM6-TRIM34B2RNG4 842 aa8.37□□□□□ -1.07
TOP3A-207ENST00000493648 C19orf81C9J6K1 198 aa8.37□□□□□ -1.07
TOP3A-207ENST00000493648 PATL2C9JE40 543 aaKnown RBP8.37□□□□□ -1.07
TOP3A-207ENST00000493648 USP17L10C9JJH3 530 aa8.37□□□□□ -1.07
TOP3A-207ENST00000493648 USP17L12C9JPN9 530 aa8.37□□□□□ -1.07
TOP3A-207ENST00000493648 USP17L21D6R901 530 aa8.37□□□□□ -1.07
TOP3A-207ENST00000493648 GH2P01242 217 aa8.37□□□□□ -1.07
TOP3A-207ENST00000493648 APPP05067 770 aa8.37□□□□□ -1.07
TOP3A-207ENST00000493648 MOGSQ13724 837 aa8.37□□□□□ -1.07
TOP3A-207ENST00000493648 KIF22Q14807 665 aa8.37□□□□□ -1.07
TOP3A-207ENST00000493648 ABCB5Q2M3G0 1257 aa8.37□□□□□ -1.07
TOP3A-207ENST00000493648 GPAT2Q6NUI2 795 aa8.37□□□□□ -1.07
TOP3A-207ENST00000493648 GIMAP6Q6P9H5 292 aa8.37□□□□□ -1.07
TOP3A-207ENST00000493648 CCDC84Q86UT8 332 aaPredicted RBP8.37□□□□□ -1.07
TOP3A-207ENST00000493648 PROCA1Q8NCQ7 364 aaPredicted RBP8.37□□□□□ -1.07
TOP3A-207ENST00000493648 OSBP2Q969R2 916 aa8.37□□□□□ -1.07
TOP3A-207ENST00000493648 ABHD8Q96I13 439 aa8.37□□□□□ -1.07
TOP3A-207ENST00000493648 PARK7Q99497 189 aaKnown RBP8.37□□□□□ -1.07
TOP3A-207ENST00000493648 DNAJC18Q9H819 358 aa8.37□□□□□ -1.07
TOP3A-207ENST00000493648 TMOD4Q9NZQ9 345 aa8.37□□□□□ -1.07
TOP3A-207ENST00000493648 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.37□□□□□ -1.07
TOP3A-207ENST00000493648 ZBTB21Q9ULJ3 1066 aa8.37□□□□□ -1.07
TOP3A-207ENST00000493648 ATAD5Q96QE3 1844 aa8.37□□□□□ -1.07
TOP3A-207ENST00000493648 SIPA1L1O43166 1804 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 PHIPQ8WWQ0 1821 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 GSG1L2A8MUP6 293 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 MPHOSPH10O00566 681 aaKnown RBP8.36□□□□□ -1.07
TOP3A-207ENST00000493648 GPAA1O43292 621 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 CYP2D6P10635 497 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 OSBPP22059 807 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 SHMT1P34896 483 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 HMGCS2P54868 508 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 BACE1P56817 501 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 JAG1P78504 1218 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 GABPAQ06546 454 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 RAB3GAP1Q15042 981 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 SBK1Q52WX2 424 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 SH3D19Q5HYK7 790 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 ZMYM1Q5SVZ6 1142 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 C12orf60Q5U649 245 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 CTR9Q6PD62 1173 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 C17orf99Q6UX52 265 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 PLEKHM2Q8IWE5 1019 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 CD99L2Q8TCZ2 262 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 RILPL2Q969X0 211 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 NACAP1Q9BZK3 213 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 OSBPL3Q9H4L5 887 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 EFCC1Q9HA90 598 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 ARPP21Q9UBL0 812 aaPredicted RBP8.36□□□□□ -1.07
TOP3A-207ENST00000493648 PNMA3Q9UL41 463 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 AGTPBP1Q9UPW5 1226 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 NAV1Q8NEY1 1877 aa8.36□□□□□ -1.07
TOP3A-207ENST00000493648 BAZ2AQ9UIF9 1905 aaKnown RBP8.35□□□□□ -1.07
TOP3A-207ENST00000493648 CCDC85CA6NKD9 419 aa8.35□□□□□ -1.07
TOP3A-207ENST00000493648 MINDY4BA8MYZ0 360 aa8.35□□□□□ -1.07
TOP3A-207ENST00000493648 M0R2C6 588 aa8.35□□□□□ -1.07
TOP3A-207ENST00000493648 CYP2C8P10632 490 aa8.35□□□□□ -1.07
TOP3A-207ENST00000493648 TDO2P48775 406 aa8.35□□□□□ -1.07
TOP3A-207ENST00000493648 CDK8P49336 464 aa8.35□□□□□ -1.07
TOP3A-207ENST00000493648 MTMR2Q13614 643 aa8.35□□□□□ -1.07
TOP3A-207ENST00000493648 FBXO46Q6PJ61 603 aaPredicted RBP8.35□□□□□ -1.07
TOP3A-207ENST00000493648 USP17L2Q6R6M4 530 aa8.35□□□□□ -1.07
TOP3A-207ENST00000493648 IFNL3Q8IZI9 196 aa8.35□□□□□ -1.07
TOP3A-207ENST00000493648 SMCR8Q8TEV9 937 aaPredicted RBP8.35□□□□□ -1.07
TOP3A-207ENST00000493648 DYNLL2Q96FJ2 89 aa8.35□□□□□ -1.07
TOP3A-207ENST00000493648 CCDC17Q96LX7 622 aa8.35□□□□□ -1.07
TOP3A-207ENST00000493648 FEZ1Q99689 392 aa8.35□□□□□ -1.07
TOP3A-207ENST00000493648 ZNF287Q9HBT7 754 aa8.35□□□□□ -1.07
TOP3A-207ENST00000493648 HELLSQ9NRZ9 838 aa8.35□□□□□ -1.07
TOP3A-207ENST00000493648 CPA4Q9UI42 421 aa8.35□□□□□ -1.07
TOP3A-207ENST00000493648 TRIM17Q9Y577 477 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms