RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 SP3Q02447 781 aa11.36□□□□□ -0.59
SGIP1-213ENST00000493564 NUCB1Q02818 461 aa11.36□□□□□ -0.59
SGIP1-213ENST00000493564 CERKLQ49MI3 558 aaPredicted RBP11.36□□□□□ -0.59
SGIP1-213ENST00000493564 ANKRD23Q86SG2 305 aa11.36□□□□□ -0.59
SGIP1-213ENST00000493564 SLC44A5Q8NCS7 719 aa11.36□□□□□ -0.59
SGIP1-213ENST00000493564 APPBP2Q92624 585 aa11.36□□□□□ -0.59
SGIP1-213ENST00000493564 STAP2Q9UGK3 403 aa11.36□□□□□ -0.59
SGIP1-213ENST00000493564 CPA4Q9UI42 421 aa11.36□□□□□ -0.59
SGIP1-213ENST00000493564 MYH1P12882 1939 aa11.36□□□□□ -0.59
SGIP1-213ENST00000493564 SIPA1L1O43166 1804 aa11.35□□□□□ -0.59
SGIP1-213ENST00000493564 CCDC85CA6NKD9 419 aa11.35□□□□□ -0.59
SGIP1-213ENST00000493564 MPHOSPH10O00566 681 aaKnown RBP11.35□□□□□ -0.59
SGIP1-213ENST00000493564 TLR2O60603 784 aa11.35□□□□□ -0.59
SGIP1-213ENST00000493564 APPP05067 770 aa11.35□□□□□ -0.59
SGIP1-213ENST00000493564 SHMT1P34896 483 aa11.35□□□□□ -0.59
SGIP1-213ENST00000493564 HMGCS2P54868 508 aa11.35□□□□□ -0.59
SGIP1-213ENST00000493564 RAB3GAP1Q15042 981 aa11.35□□□□□ -0.59
SGIP1-213ENST00000493564 TREML2Q5T2D2 321 aa11.35□□□□□ -0.59
SGIP1-213ENST00000493564 TATDN1Q6P1N9 297 aa11.35□□□□□ -0.59
SGIP1-213ENST00000493564 FASTKD5Q7L8L6 764 aaKnown RBP11.35□□□□□ -0.59
SGIP1-213ENST00000493564 EHD4Q9H223 541 aa11.35□□□□□ -0.59
SGIP1-213ENST00000493564 ATP8A2Q9NTI2 1148 aa11.35□□□□□ -0.59
SGIP1-213ENST00000493564 ZBTB21Q9ULJ3 1066 aa11.35□□□□□ -0.59
SGIP1-213ENST00000493564 FOCADQ5VW36 1801 aa11.35□□□□□ -0.59
SGIP1-213ENST00000493564 GSG1L2A8MUP6 293 aa11.34□□□□□ -0.59
SGIP1-213ENST00000493564 MINDY4BA8MYZ0 360 aa11.34□□□□□ -0.59
SGIP1-213ENST00000493564 TRIM6-TRIM34B2RNG4 842 aa11.34□□□□□ -0.59
SGIP1-213ENST00000493564 GPAA1O43292 621 aa11.34□□□□□ -0.59
SGIP1-213ENST00000493564 ZFYP08048 801 aaPredicted RBP11.34□□□□□ -0.59
SGIP1-213ENST00000493564 ASNSP08243 561 aa11.34□□□□□ -0.59
SGIP1-213ENST00000493564 GABPAQ06546 454 aa11.34□□□□□ -0.59
SGIP1-213ENST00000493564 MTMR2Q13614 643 aa11.34□□□□□ -0.59
SGIP1-213ENST00000493564 ZYXQ15942 572 aaKnown RBP11.34□□□□□ -0.59
SGIP1-213ENST00000493564 ABCB5Q2M3G0 1257 aa11.34□□□□□ -0.59
SGIP1-213ENST00000493564 NOM1Q5C9Z4 860 aaKnown RBP11.34□□□□□ -0.59
SGIP1-213ENST00000493564 CTR9Q6PD62 1173 aa11.34□□□□□ -0.59
SGIP1-213ENST00000493564 CCDC129Q6ZRS4 1044 aa11.34□□□□□ -0.59
SGIP1-213ENST00000493564 PLEKHM2Q8IWE5 1019 aa11.34□□□□□ -0.59
SGIP1-213ENST00000493564 RILPL2Q969X0 211 aa11.34□□□□□ -0.59
SGIP1-213ENST00000493564 ARHGAP39Q9C0H5 1083 aa11.34□□□□□ -0.59
SGIP1-213ENST00000493564 AS3MTQ9HBK9 375 aa11.34□□□□□ -0.59
SGIP1-213ENST00000493564 TRIM17Q9Y577 477 aa11.34□□□□□ -0.59
SGIP1-213ENST00000493564 BACE1P56817 501 aa11.33□□□□□ -0.6
SGIP1-213ENST00000493564 SEPT2Q15019 361 aa11.33□□□□□ -0.6
SGIP1-213ENST00000493564 LRRFIP1Q32MZ4 808 aaKnown RBP11.33□□□□□ -0.6
SGIP1-213ENST00000493564 ZMYM1Q5SVZ6 1142 aa11.33□□□□□ -0.6
SGIP1-213ENST00000493564 C12orf60Q5U649 245 aa11.33□□□□□ -0.6
SGIP1-213ENST00000493564 C17orf99Q6UX52 265 aa11.33□□□□□ -0.6
SGIP1-213ENST00000493564 OTOP1Q7RTM1 612 aa11.33□□□□□ -0.6
SGIP1-213ENST00000493564 EVI5LQ96CN4 794 aa11.33□□□□□ -0.6
SGIP1-213ENST00000493564 ERO1AQ96HE7 468 aa11.33□□□□□ -0.6
SGIP1-213ENST00000493564 DDRGK1Q96HY6 314 aa11.33□□□□□ -0.6
SGIP1-213ENST00000493564 WDR18Q9BV38 432 aa11.33□□□□□ -0.6
SGIP1-213ENST00000493564 EFCC1Q9HA90 598 aa11.33□□□□□ -0.6
SGIP1-213ENST00000493564 ZCCHC17Q9NP64 241 aaKnown RBP11.33□□□□□ -0.6
SGIP1-213ENST00000493564 CABP5Q9NP86 173 aa11.33□□□□□ -0.6
SGIP1-213ENST00000493564 DOCK1Q14185 1865 aa11.33□□□□□ -0.6
SGIP1-213ENST00000493564 PATL2C9JE40 543 aaKnown RBP11.32□□□□□ -0.6
SGIP1-213ENST00000493564 USP17L10C9JJH3 530 aa11.32□□□□□ -0.6
SGIP1-213ENST00000493564 AKR1B1P15121 316 aa11.32□□□□□ -0.6
SGIP1-213ENST00000493564 GUCY1A2P33402 732 aa11.32□□□□□ -0.6
SGIP1-213ENST00000493564 CDK8P49336 464 aa11.32□□□□□ -0.6
SGIP1-213ENST00000493564 AMOTL1Q8IY63 956 aa11.32□□□□□ -0.6
SGIP1-213ENST00000493564 IFNL3Q8IZI9 196 aa11.32□□□□□ -0.6
SGIP1-213ENST00000493564 ACER1Q8TDN7 264 aa11.32□□□□□ -0.6
SGIP1-213ENST00000493564 PARK7Q99497 189 aaKnown RBP11.32□□□□□ -0.6
SGIP1-213ENST00000493564 EMILIN3Q9NT22 766 aa11.32□□□□□ -0.6
SGIP1-213ENST00000493564 AGTPBP1Q9UPW5 1226 aa11.32□□□□□ -0.6
SGIP1-213ENST00000493564 PHIPQ8WWQ0 1821 aa11.32□□□□□ -0.6
SGIP1-213ENST00000493564 MYH7P12883 1935 aa11.31□□□□□ -0.6
SGIP1-213ENST00000493564 BAZ2AQ9UIF9 1905 aaKnown RBP11.31□□□□□ -0.6
SGIP1-213ENST00000493564 PEX10O60683 326 aa11.31□□□□□ -0.6
SGIP1-213ENST00000493564 PDE4AP27815 886 aa11.31□□□□□ -0.6
SGIP1-213ENST00000493564 CTGFP29279 349 aa11.31□□□□□ -0.6
SGIP1-213ENST00000493564 TDO2P48775 406 aa11.31□□□□□ -0.6
SGIP1-213ENST00000493564 CLEC10AQ8IUN9 316 aa11.31□□□□□ -0.6
SGIP1-213ENST00000493564 SMCR8Q8TEV9 937 aaPredicted RBP11.31□□□□□ -0.6
SGIP1-213ENST00000493564 FAM227BQ96M60 508 aa11.31□□□□□ -0.6
SGIP1-213ENST00000493564 FEZ1Q99689 392 aa11.31□□□□□ -0.6
SGIP1-213ENST00000493564 TBC1D2Q9BYX2 928 aa11.31□□□□□ -0.6
SGIP1-213ENST00000493564 EPB41L4AQ9HCS5 686 aaPredicted RBP11.31□□□□□ -0.6
SGIP1-213ENST00000493564 GINM1Q9NU53 330 aa11.31□□□□□ -0.6
SGIP1-213ENST00000493564 TMOD4Q9NZQ9 345 aa11.31□□□□□ -0.6
SGIP1-213ENST00000493564 SWAP70Q9UH65 585 aa11.31□□□□□ -0.6
SGIP1-213ENST00000493564 HPS5Q9UPZ3 1129 aa11.31□□□□□ -0.6
SGIP1-213ENST00000493564 LAMB1P07942 1786 aa11.31□□□□□ -0.6
SGIP1-213ENST00000493564 ATAD5Q96QE3 1844 aa11.3□□□□□ -0.6
SGIP1-213ENST00000493564 NAV1Q8NEY1 1877 aa11.3□□□□□ -0.6
SGIP1-213ENST00000493564 C19orf81C9J6K1 198 aa11.3□□□□□ -0.6
SGIP1-213ENST00000493564 FMNL1O95466 1100 aaPredicted RBP11.3□□□□□ -0.6
SGIP1-213ENST00000493564 GNAT2P19087 354 aa11.3□□□□□ -0.6
SGIP1-213ENST00000493564 HOXD11P31277 338 aaPredicted RBP11.3□□□□□ -0.6
SGIP1-213ENST00000493564 PSMC4P43686 418 aa11.3□□□□□ -0.6
SGIP1-213ENST00000493564 LACTBP83111 547 aaPredicted RBP11.3□□□□□ -0.6
SGIP1-213ENST00000493564 NMIQ13287 307 aaPredicted RBP11.3□□□□□ -0.6
SGIP1-213ENST00000493564 KIF22Q14807 665 aa11.3□□□□□ -0.6
SGIP1-213ENST00000493564 PKN2Q16513 984 aaKnown RBP11.3□□□□□ -0.6
SGIP1-213ENST00000493564 SH3D19Q5HYK7 790 aa11.3□□□□□ -0.6
SGIP1-213ENST00000493564 FBXO46Q6PJ61 603 aaPredicted RBP11.3□□□□□ -0.6
SGIP1-213ENST00000493564 USP17L2Q6R6M4 530 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms