RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 IKZF1Q13422 519 aa7.08□□□□□ -1.28
CLIP4-212ENST00000493551 MPZL3Q6UWV2 235 aa7.08□□□□□ -1.28
CLIP4-212ENST00000493551 PRR23BQ6ZRT6 265 aa7.08□□□□□ -1.28
CLIP4-212ENST00000493551 C1QTNF9P0C862 333 aa7.07□□□□□ -1.28
CLIP4-212ENST00000493551 LIG1P18858 919 aa7.07□□□□□ -1.28
CLIP4-212ENST00000493551 GGT6Q6P531 493 aa7.07□□□□□ -1.28
CLIP4-212ENST00000493551 AMIGO3Q86WK7 504 aa7.07□□□□□ -1.28
CLIP4-212ENST00000493551 GTF3C2Q8WUA4 911 aaPredicted RBP7.07□□□□□ -1.28
CLIP4-212ENST00000493551 WDR89Q96FK6 387 aaPredicted RBP7.07□□□□□ -1.28
CLIP4-212ENST00000493551 DISC1Q9NRI5 854 aa7.07□□□□□ -1.28
CLIP4-212ENST00000493551 PCOLCE2Q9UKZ9 415 aa7.07□□□□□ -1.28
CLIP4-212ENST00000493551 TROQ12816 1431 aaPredicted RBP7.07□□□□□ -1.28
CLIP4-212ENST00000493551 SUPT6HQ7KZ85 1726 aaKnown RBP7.07□□□□□ -1.28
CLIP4-212ENST00000493551 ZMYM3Q14202 1370 aa7.07□□□□□ -1.28
CLIP4-212ENST00000493551 CLTCQ00610 1675 aaKnown RBP7.06□□□□□ -1.28
CLIP4-212ENST00000493551 IQSEC2Q5JU85 1478 aa7.06□□□□□ -1.28
CLIP4-212ENST00000493551 MYO3AQ8NEV4 1616 aa7.06□□□□□ -1.28
CLIP4-212ENST00000493551 KRT1P04264 644 aa7.06□□□□□ -1.28
CLIP4-212ENST00000493551 NPR3P17342 541 aa7.06□□□□□ -1.28
CLIP4-212ENST00000493551 ITPKAP23677 461 aa7.06□□□□□ -1.28
CLIP4-212ENST00000493551 TTLL4Q14679 1199 aa7.06□□□□□ -1.28
CLIP4-212ENST00000493551 FYB2Q5VWT5 728 aa7.06□□□□□ -1.28
CLIP4-212ENST00000493551 GJD3Q8N144 294 aa7.06□□□□□ -1.28
CLIP4-212ENST00000493551 CCDC86Q9H6F5 360 aaKnown RBP7.06□□□□□ -1.28
CLIP4-212ENST00000493551 CDK11AQ9UQ88 783 aaPredicted RBP7.06□□□□□ -1.28
CLIP4-212ENST00000493551 CLIP1P30622 1438 aa7.06□□□□□ -1.28
CLIP4-212ENST00000493551 ABCC1P33527 1531 aa7.06□□□□□ -1.28
CLIP4-212ENST00000493551 CDC42BPBQ9Y5S2 1711 aa7.05□□□□□ -1.28
CLIP4-212ENST00000493551 RNGTTO60942 597 aaKnown RBP7.05□□□□□ -1.28
CLIP4-212ENST00000493551 INHBBP09529 407 aa7.05□□□□□ -1.28
CLIP4-212ENST00000493551 HNRNPMP52272 730 aaKnown RBP eCLIP7.05□□□□□ -1.28
CLIP4-212ENST00000493551 TOP6BLQ8N6T0 577 aa7.05□□□□□ -1.28
CLIP4-212ENST00000493551 FBXO15Q8NCQ5 510 aaPredicted RBP7.05□□□□□ -1.28
CLIP4-212ENST00000493551 KIRREL1Q96J84 757 aa7.05□□□□□ -1.28
CLIP4-212ENST00000493551 ITSN2Q9NZM3 1697 aa7.05□□□□□ -1.28
CLIP4-212ENST00000493551 KIDINS220Q9ULH0 1771 aa7.05□□□□□ -1.28
CLIP4-212ENST00000493551 MLH3Q9UHC1 1453 aa7.04□□□□□ -1.28
CLIP4-212ENST00000493551 LRRIQ1Q96JM4 1722 aa7.04□□□□□ -1.28
CLIP4-212ENST00000493551 CEP170BQ9Y4F5 1589 aaPredicted RBP7.04□□□□□ -1.28
CLIP4-212ENST00000493551 FAM13AO94988 1023 aa7.04□□□□□ -1.28
CLIP4-212ENST00000493551 HCLS1P14317 486 aaPredicted RBP7.04□□□□□ -1.28
CLIP4-212ENST00000493551 PTPN12Q05209 780 aaKnown RBP7.04□□□□□ -1.28
CLIP4-212ENST00000493551 MTMR3Q13615 1198 aa7.04□□□□□ -1.28
CLIP4-212ENST00000493551 KIF4BQ2VIQ3 1234 aa7.04□□□□□ -1.28
CLIP4-212ENST00000493551 KIAA0319Q5VV43 1072 aa7.04□□□□□ -1.28
CLIP4-212ENST00000493551 GTF2IRD1Q9UHL9 959 aa7.04□□□□□ -1.28
CLIP4-212ENST00000493551 PCDHGC5Q9Y5F6 944 aa7.04□□□□□ -1.28
CLIP4-212ENST00000493551 SYCP2Q9BX26 1530 aa7.04□□□□□ -1.28
CLIP4-212ENST00000493551 SETD1BQ9UPS6 1966 aaKnown RBP7.04□□□□□ -1.28
CLIP4-212ENST00000493551 ARHGAP35Q9NRY4 1499 aa7.04□□□□□ -1.28
CLIP4-212ENST00000493551 REREQ9P2R6 1566 aa7.03□□□□□ -1.28
CLIP4-212ENST00000493551 SPAG9O60271 1321 aaKnown RBP7.03□□□□□ -1.28
CLIP4-212ENST00000493551 CNTLNQ9NXG0 1405 aa7.03□□□□□ -1.28
CLIP4-212ENST00000493551 AGLP35573 1532 aa7.03□□□□□ -1.28
CLIP4-212ENST00000493551 PREX2Q70Z35 1606 aa7.03□□□□□ -1.28
CLIP4-212ENST00000493551 ZNF862O60290 1169 aa7.03□□□□□ -1.28
CLIP4-212ENST00000493551 FZD6O60353 706 aa7.03□□□□□ -1.28
CLIP4-212ENST00000493551 CTSWP56202 376 aa7.03□□□□□ -1.28
CLIP4-212ENST00000493551 TMEM67Q5HYA8 995 aa7.03□□□□□ -1.28
CLIP4-212ENST00000493551 HEXIM2Q96MH2 286 aaKnown RBP7.03□□□□□ -1.28
CLIP4-212ENST00000493551 KRT82Q9NSB4 513 aa7.03□□□□□ -1.28
CLIP4-212ENST00000493551 FMN1Q68DA7 1419 aa7.02□□□□□ -1.29
CLIP4-212ENST00000493551 NPIPB6E9PJ23 425 aa7.02□□□□□ -1.29
CLIP4-212ENST00000493551 IGF2BP3O00425 579 aaKnown RBP eCLIP7.02□□□□□ -1.29
CLIP4-212ENST00000493551 TOM1O60784 492 aa7.02□□□□□ -1.29
CLIP4-212ENST00000493551 CYFIP1Q7L576 1253 aa7.02□□□□□ -1.29
CLIP4-212ENST00000493551 SPACA3Q8IXA5 215 aa7.02□□□□□ -1.29
CLIP4-212ENST00000493551 ZC3H12CQ9C0D7 883 aaKnown RBP7.02□□□□□ -1.29
CLIP4-212ENST00000493551 SAMD9LQ8IVG5 1584 aa7.02□□□□□ -1.29
CLIP4-212ENST00000493551 NPATQ14207 1427 aa7.01□□□□□ -1.29
CLIP4-212ENST00000493551 PTPRKQ15262 1439 aa7.01□□□□□ -1.29
CLIP4-212ENST00000493551 RPS26P11Q5JNZ5 115 aaPredicted RBP7.01□□□□□ -1.29
CLIP4-212ENST00000493551 EHD4Q9H223 541 aa7.01□□□□□ -1.29
CLIP4-212ENST00000493551 MROH2AA6NES4 1674 aa7□□□□□ -1.29
CLIP4-212ENST00000493551 ZNF142P52746 1687 aaPredicted RBP7□□□□□ -1.29
CLIP4-212ENST00000493551 TCOF1Q13428 1488 aaKnown RBP7□□□□□ -1.29
CLIP4-212ENST00000493551 NEFMP07197 916 aa7□□□□□ -1.29
CLIP4-212ENST00000493551 TMEM253P0C7T8 217 aa7□□□□□ -1.29
CLIP4-212ENST00000493551 CLCN7P51798 805 aa7□□□□□ -1.29
CLIP4-212ENST00000493551 KCNA10Q16322 511 aa7□□□□□ -1.29
CLIP4-212ENST00000493551 CIAPIN1Q6FI81 312 aa7□□□□□ -1.29
CLIP4-212ENST00000493551 PHF6Q8IWS0 365 aaKnown RBP eCLIP7□□□□□ -1.29
CLIP4-212ENST00000493551 ISL2Q96A47 359 aa7□□□□□ -1.29
CLIP4-212ENST00000493551 PBXIP1Q96AQ6 731 aa7□□□□□ -1.29
CLIP4-212ENST00000493551 NSUN3Q9H649 340 aaKnown RBP7□□□□□ -1.29
CLIP4-212ENST00000493551 SSU72Q9NP77 194 aaKnown RBP7□□□□□ -1.29
CLIP4-212ENST00000493551 JAG2Q9Y219 1238 aa7□□□□□ -1.29
CLIP4-212ENST00000493551 CDC42BPAQ5VT25 1732 aa7□□□□□ -1.29
CLIP4-212ENST00000493551 ATP7AQ04656 1500 aa7□□□□□ -1.29
CLIP4-212ENST00000493551 EEA1Q15075 1411 aa7□□□□□ -1.29
CLIP4-212ENST00000493551 PITPNM2Q9BZ72 1349 aa7□□□□□ -1.29
CLIP4-212ENST00000493551 A2MP01023 1474 aa6.99□□□□□ -1.29
CLIP4-212ENST00000493551 PLA2R1Q13018 1463 aa6.99□□□□□ -1.29
CLIP4-212ENST00000493551 SHANK2Q9UPX8 1470 aa6.99□□□□□ -1.29
CLIP4-212ENST00000493551 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.99□□□□□ -1.29
CLIP4-212ENST00000493551 GSTP1P09211 210 aaKnown RBP6.99□□□□□ -1.29
CLIP4-212ENST00000493551 FAM214BQ7L5A3 538 aa6.99□□□□□ -1.29
CLIP4-212ENST00000493551 DIRC2Q96SL1 478 aa6.99□□□□□ -1.29
CLIP4-212ENST00000493551 CD320Q9NPF0 282 aa6.99□□□□□ -1.29
CLIP4-212ENST00000493551 NEURL4Q96JN8 1562 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms