RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 ADD2P35612 726 aa13.9□□□□□ -0.18
LRTM1-202ENST00000493075 GCLCP48506 637 aaPredicted RBP13.9□□□□□ -0.18
LRTM1-202ENST00000493075 HMGCS2P54868 508 aa13.9□□□□□ -0.18
LRTM1-202ENST00000493075 C1QBPQ07021 282 aaKnown RBP13.9□□□□□ -0.18
LRTM1-202ENST00000493075 ZBTB21Q9ULJ3 1066 aa13.9□□□□□ -0.18
LRTM1-202ENST00000493075 POTEFA5A3E0 1075 aa13.9□□□□□ -0.19
LRTM1-202ENST00000493075 POLR3DP05423 398 aaPredicted RBP13.9□□□□□ -0.19
LRTM1-202ENST00000493075 PLCD1P51178 756 aa13.9□□□□□ -0.19
LRTM1-202ENST00000493075 UBE3CQ15386 1083 aa13.9□□□□□ -0.19
LRTM1-202ENST00000493075 FAM110CQ1W6H9 321 aa13.9□□□□□ -0.19
LRTM1-202ENST00000493075 ZSCAN25Q6NSZ9 544 aa13.9□□□□□ -0.19
LRTM1-202ENST00000493075 EDC3Q96F86 508 aaKnown RBP13.9□□□□□ -0.19
LRTM1-202ENST00000493075 BCL11AQ9H165 835 aa13.9□□□□□ -0.19
LRTM1-202ENST00000493075 ECHDC1Q9NTX5 307 aa13.9□□□□□ -0.19
LRTM1-202ENST00000493075 TMOD4Q9NZQ9 345 aa13.9□□□□□ -0.19
LRTM1-202ENST00000493075 SMARCA5O60264 1052 aaPredicted RBP13.89□□□□□ -0.19
LRTM1-202ENST00000493075 GDF11O95390 407 aa13.89□□□□□ -0.19
LRTM1-202ENST00000493075 RRP1P56182 461 aaKnown RBP13.89□□□□□ -0.19
LRTM1-202ENST00000493075 GABPAQ06546 454 aa13.89□□□□□ -0.19
LRTM1-202ENST00000493075 MTMR2Q13614 643 aa13.89□□□□□ -0.19
LRTM1-202ENST00000493075 CERKLQ49MI3 558 aaPredicted RBP13.89□□□□□ -0.19
LRTM1-202ENST00000493075 RAET1EQ8TD07 263 aa13.89□□□□□ -0.19
LRTM1-202ENST00000493075 ASCC2Q9H1I8 757 aaPredicted RBP13.89□□□□□ -0.19
LRTM1-202ENST00000493075 DCP1AQ9NPI6 582 aaPredicted RBP13.89□□□□□ -0.19
LRTM1-202ENST00000493075 ATP8A2Q9NTI2 1148 aa13.89□□□□□ -0.19
LRTM1-202ENST00000493075 MYPNQ86TC9 1320 aa13.88□□□□□ -0.19
LRTM1-202ENST00000493075 GH2P01242 217 aa13.88□□□□□ -0.19
LRTM1-202ENST00000493075 GRK4P32298 578 aa13.88□□□□□ -0.19
LRTM1-202ENST00000493075 SLC4A8Q2Y0W8 1093 aa13.88□□□□□ -0.19
LRTM1-202ENST00000493075 USP17L2Q6R6M4 530 aa13.88□□□□□ -0.19
LRTM1-202ENST00000493075 LCORLQ8N3X6 602 aa13.88□□□□□ -0.19
LRTM1-202ENST00000493075 ANKRD13CQ8N6S4 541 aa13.88□□□□□ -0.19
LRTM1-202ENST00000493075 SH3TC2Q8TF17 1288 aa13.88□□□□□ -0.19
LRTM1-202ENST00000493075 GPATCH3Q96I76 525 aa13.88□□□□□ -0.19
LRTM1-202ENST00000493075 CABP5Q9NP86 173 aa13.88□□□□□ -0.19
LRTM1-202ENST00000493075 MCM9Q9NXL9 1143 aa13.88□□□□□ -0.19
LRTM1-202ENST00000493075 PCDHB15Q9Y5E8 787 aa13.88□□□□□ -0.19
LRTM1-202ENST00000493075 DOCK1Q14185 1865 aa13.87□□□□□ -0.19
LRTM1-202ENST00000493075 HTTP42858 3142 aa13.87□□□□□ -0.19
LRTM1-202ENST00000493075 SHMT1P34896 483 aa13.87□□□□□ -0.19
LRTM1-202ENST00000493075 USP14P54578 494 aa13.87□□□□□ -0.19
LRTM1-202ENST00000493075 PRKCZQ05513 592 aa13.87□□□□□ -0.19
LRTM1-202ENST00000493075 IRF5Q13568 498 aa13.87□□□□□ -0.19
LRTM1-202ENST00000493075 ABCB5Q2M3G0 1257 aa13.87□□□□□ -0.19
LRTM1-202ENST00000493075 SHROOM1Q2M3G4 852 aaPredicted RBP13.87□□□□□ -0.19
LRTM1-202ENST00000493075 SDR42E1Q8WUS8 393 aa13.87□□□□□ -0.19
LRTM1-202ENST00000493075 C12orf42Q96LP6 360 aa13.87□□□□□ -0.19
LRTM1-202ENST00000493075 ARMT1Q9H993 441 aa13.87□□□□□ -0.19
LRTM1-202ENST00000493075 EMILIN3Q9NT22 766 aa13.87□□□□□ -0.19
LRTM1-202ENST00000493075 MORF4L1Q9UBU8 362 aa13.87□□□□□ -0.19
LRTM1-202ENST00000493075 TNPO2O14787 897 aaKnown RBP13.86□□□□□ -0.19
LRTM1-202ENST00000493075 ECM2O94769 699 aaPredicted RBP13.86□□□□□ -0.19
LRTM1-202ENST00000493075 MBD4O95243 580 aa13.86□□□□□ -0.19
LRTM1-202ENST00000493075 EN2P19622 333 aaPredicted RBP13.86□□□□□ -0.19
LRTM1-202ENST00000493075 IRX3P78415 501 aaPredicted RBP13.86□□□□□ -0.19
LRTM1-202ENST00000493075 SLAIN1Q8ND83 568 aa13.86□□□□□ -0.19
LRTM1-202ENST00000493075 PXYLP1Q8TE99 480 aa13.86□□□□□ -0.19
LRTM1-202ENST00000493075 GTF3C2Q8WUA4 911 aaPredicted RBP13.86□□□□□ -0.19
LRTM1-202ENST00000493075 COA7Q96BR5 231 aa13.86□□□□□ -0.19
LRTM1-202ENST00000493075 P2RX7Q99572 595 aaKnown RBP13.86□□□□□ -0.19
LRTM1-202ENST00000493075 KIAA1683Q9H0B3 1180 aa13.86□□□□□ -0.19
LRTM1-202ENST00000493075 SWAP70Q9UH65 585 aa13.86□□□□□ -0.19
LRTM1-202ENST00000493075 GABRQQ9UN88 632 aa13.86□□□□□ -0.19
LRTM1-202ENST00000493075 FLT3LGP49771 235 aa13.85□□□□□ -0.19
LRTM1-202ENST00000493075 UBXN2AP68543 259 aa13.85□□□□□ -0.19
LRTM1-202ENST00000493075 RAB3GAP1Q15042 981 aa13.85□□□□□ -0.19
LRTM1-202ENST00000493075 SLFNL1Q499Z3 407 aa13.85□□□□□ -0.19
LRTM1-202ENST00000493075 KBTBD3Q8NAB2 608 aa13.85□□□□□ -0.19
LRTM1-202ENST00000493075 PHIPQ8WWQ0 1821 aa13.84□□□□□ -0.19
LRTM1-202ENST00000493075 PRKAB2O43741 272 aa13.84□□□□□ -0.19
LRTM1-202ENST00000493075 CAPN2P17655 700 aa13.84□□□□□ -0.19
LRTM1-202ENST00000493075 GUCY1A2P33402 732 aa13.84□□□□□ -0.19
LRTM1-202ENST00000493075 HERVK_113P62684 666 aa13.84□□□□□ -0.19
LRTM1-202ENST00000493075 AAMPQ13685 434 aa13.84□□□□□ -0.19
LRTM1-202ENST00000493075 C12orf60Q5U649 245 aa13.84□□□□□ -0.19
LRTM1-202ENST00000493075 AMOTL1Q8IY63 956 aa13.84□□□□□ -0.19
LRTM1-202ENST00000493075 DDRGK1Q96HY6 314 aa13.84□□□□□ -0.19
LRTM1-202ENST00000493075 PUS7LQ9H0K6 701 aaKnown RBP13.84□□□□□ -0.19
LRTM1-202ENST00000493075 SIPA1L1O43166 1804 aa13.84□□□□□ -0.19
LRTM1-202ENST00000493075 TTC41PQ6P2S7 1318 aa13.83□□□□□ -0.19
LRTM1-202ENST00000493075 USP17L15C9J2P7 530 aa13.83□□□□□ -0.2
LRTM1-202ENST00000493075 USP17L13C9JLJ4 530 aa13.83□□□□□ -0.2
LRTM1-202ENST00000493075 USP17L11C9JVI0 530 aa13.83□□□□□ -0.2
LRTM1-202ENST00000493075 USP17L18D6R9N7 530 aa13.83□□□□□ -0.2
LRTM1-202ENST00000493075 USP17L22D6RA61 530 aa13.83□□□□□ -0.2
LRTM1-202ENST00000493075 USP17L17D6RBQ6 530 aa13.83□□□□□ -0.2
LRTM1-202ENST00000493075 USP17L19D6RCP7 530 aa13.83□□□□□ -0.2
LRTM1-202ENST00000493075 USP17L20D6RJB6 530 aa13.83□□□□□ -0.2
LRTM1-202ENST00000493075 ERC2O15083 957 aa13.83□□□□□ -0.2
LRTM1-202ENST00000493075 ADCY3O60266 1144 aa13.83□□□□□ -0.2
LRTM1-202ENST00000493075 ZFYP08048 801 aaPredicted RBP13.83□□□□□ -0.2
LRTM1-202ENST00000493075 USP17L24Q0WX57 530 aa13.83□□□□□ -0.2
LRTM1-202ENST00000493075 MTFR1Q15390 333 aa13.83□□□□□ -0.2
LRTM1-202ENST00000493075 LRRFIP1Q32MZ4 808 aaKnown RBP13.83□□□□□ -0.2
LRTM1-202ENST00000493075 PRPF38BQ5VTL8 546 aaKnown RBP13.83□□□□□ -0.2
LRTM1-202ENST00000493075 GPRC5AQ8NFJ5 357 aa13.83□□□□□ -0.2
LRTM1-202ENST00000493075 NKX2-3Q8TAU0 364 aa13.83□□□□□ -0.2
LRTM1-202ENST00000493075 CCDC17Q96LX7 622 aa13.83□□□□□ -0.2
LRTM1-202ENST00000493075 FEZ1Q99689 392 aa13.83□□□□□ -0.2
LRTM1-202ENST00000493075 RBPJLQ9UBG7 517 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms