RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 MAST2Q6P0Q8 1798 aa14.97□□□□□ -0.01
GPNMB-214ENST00000492858 CIAO1O76071 339 aa14.96□□□□□ -0.01
GPNMB-214ENST00000492858 SMAD3P84022 425 aaKnown RBP14.96□□□□□ -0.01
GPNMB-214ENST00000492858 MFSD14CQ5VZR4 134 aa14.96□□□□□ -0.01
GPNMB-214ENST00000492858 DDX20Q9UHI6 824 aaKnown RBP14.96□□□□□ -0.01
GPNMB-214ENST00000492858 FBXO3Q9UK99 471 aa14.96□□□□□ -0.01
GPNMB-214ENST00000492858 DNM1LO00429 736 aa14.95□□□□□ -0.02
GPNMB-214ENST00000492858 ZBTB22O15209 634 aa14.95□□□□□ -0.02
GPNMB-214ENST00000492858 CNGA1P29973 690 aa14.95□□□□□ -0.02
GPNMB-214ENST00000492858 MAP2K5Q13163 448 aa14.95□□□□□ -0.02
GPNMB-214ENST00000492858 ERICH6Q7L0X2 663 aa14.95□□□□□ -0.02
GPNMB-214ENST00000492858 ZNF384Q8TF68 577 aa14.95□□□□□ -0.02
GPNMB-214ENST00000492858 LPAR1Q92633 364 aa14.95□□□□□ -0.02
GPNMB-214ENST00000492858 PRDM5Q9NQX1 630 aaPredicted RBP14.95□□□□□ -0.02
GPNMB-214ENST00000492858 RAPGEFL1Q9UHV5 662 aa14.95□□□□□ -0.02
GPNMB-214ENST00000492858 HERC5Q9UII4 1024 aaKnown RBP14.95□□□□□ -0.02
GPNMB-214ENST00000492858 PDS5AQ29RF7 1337 aaKnown RBP14.94□□□□□ -0.02
GPNMB-214ENST00000492858 TNFRSF10AO00220 468 aa14.94□□□□□ -0.02
GPNMB-214ENST00000492858 MSCO60682 206 aa14.94□□□□□ -0.02
GPNMB-214ENST00000492858 ASNSP08243 561 aa14.94□□□□□ -0.02
GPNMB-214ENST00000492858 TJAP1Q5JTD0 557 aa14.94□□□□□ -0.02
GPNMB-214ENST00000492858 GTF3C2Q8WUA4 911 aaPredicted RBP14.94□□□□□ -0.02
GPNMB-214ENST00000492858 BADQ92934 168 aa14.94□□□□□ -0.02
GPNMB-214ENST00000492858 EDC3Q96F86 508 aaKnown RBP14.94□□□□□ -0.02
GPNMB-214ENST00000492858 FLRT1Q9NZU1 646 aa14.94□□□□□ -0.02
GPNMB-214ENST00000492858 NDUFB9Q9Y6M9 179 aa14.94□□□□□ -0.02
GPNMB-214ENST00000492858 PTPRCP08575 1304 aa14.93□□□□□ -0.02
GPNMB-214ENST00000492858 C19orf81C9J6K1 198 aa14.93□□□□□ -0.02
GPNMB-214ENST00000492858 USP17L10C9JJH3 530 aa14.93□□□□□ -0.02
GPNMB-214ENST00000492858 MAP4K4O95819 1239 aaPredicted RBP14.93□□□□□ -0.02
GPNMB-214ENST00000492858 IL15P40933 162 aaPredicted RBP14.93□□□□□ -0.02
GPNMB-214ENST00000492858 JAG1P78504 1218 aa14.93□□□□□ -0.02
GPNMB-214ENST00000492858 SHROOM1Q2M3G4 852 aaPredicted RBP14.93□□□□□ -0.02
GPNMB-214ENST00000492858 POTEEQ6S8J3 1075 aa14.93□□□□□ -0.02
GPNMB-214ENST00000492858 TEX11Q8IYF3 940 aa14.93□□□□□ -0.02
GPNMB-214ENST00000492858 MRPL50Q8N5N7 158 aaKnown RBP14.93□□□□□ -0.02
GPNMB-214ENST00000492858 ATAD5Q96QE3 1844 aa14.93□□□□□ -0.02
GPNMB-214ENST00000492858 LTBP2Q14767 1821 aa14.92□□□□□ -0.02
GPNMB-214ENST00000492858 GLRX3O76003 335 aaKnown RBP14.92□□□□□ -0.02
GPNMB-214ENST00000492858 LDHCP07864 332 aa14.92□□□□□ -0.02
GPNMB-214ENST00000492858 TIMM10P62072 90 aa14.92□□□□□ -0.02
GPNMB-214ENST00000492858 GSTO1P78417 241 aa14.92□□□□□ -0.02
GPNMB-214ENST00000492858 GJC2Q5T442 439 aaPredicted RBP14.92□□□□□ -0.02
GPNMB-214ENST00000492858 WDR78Q5VTH9 848 aa14.92□□□□□ -0.02
GPNMB-214ENST00000492858 USP38Q8NB14 1042 aa14.92□□□□□ -0.02
GPNMB-214ENST00000492858 PI4KBQ9UBF8 816 aa14.92□□□□□ -0.02
GPNMB-214ENST00000492858 PA2G4Q9UQ80 394 aaKnown RBP14.92□□□□□ -0.02
GPNMB-214ENST00000492858 FRMPD3Q5JV73 1810 aa14.92□□□□□ -0.02
GPNMB-214ENST00000492858 CYP2C19P33261 490 aa14.91□□□□□ -0.02
GPNMB-214ENST00000492858 CCNA1P78396 465 aa14.91□□□□□ -0.02
GPNMB-214ENST00000492858 ATP2B2Q01814 1243 aa14.91□□□□□ -0.02
GPNMB-214ENST00000492858 SLC39A5Q6ZMH5 540 aa14.91□□□□□ -0.02
GPNMB-214ENST00000492858 NSUN4Q96CB9 384 aaKnown RBP14.91□□□□□ -0.02
GPNMB-214ENST00000492858 TMEM265A0A087WTH1 108 aa14.9□□□□□ -0.02
GPNMB-214ENST00000492858 SLC15A5A6NIM6 579 aa14.9□□□□□ -0.02
GPNMB-214ENST00000492858 GDF11O95390 407 aa14.9□□□□□ -0.02
GPNMB-214ENST00000492858 PTPREP23469 700 aa14.9□□□□□ -0.02
GPNMB-214ENST00000492858 TRIM60Q495X7 471 aa14.9□□□□□ -0.02
GPNMB-214ENST00000492858 TRPV1Q8NER1 839 aa14.9□□□□□ -0.02
GPNMB-214ENST00000492858 XAGE2Q96GT9 111 aa14.9□□□□□ -0.02
GPNMB-214ENST00000492858 PDLIM7Q9NR12 457 aa14.9□□□□□ -0.02
GPNMB-214ENST00000492858 EMILIN3Q9NT22 766 aa14.9□□□□□ -0.02
GPNMB-214ENST00000492858 RABGAP1Q9Y3P9 1069 aa14.9□□□□□ -0.02
GPNMB-214ENST00000492858 A0A1B0GUL7 405 aa14.89□□□□□ -0.03
GPNMB-214ENST00000492858 TRIM43BA6NCK2 446 aa14.89□□□□□ -0.03
GPNMB-214ENST00000492858 KBTBD13C9JR72 458 aa14.89□□□□□ -0.03
GPNMB-214ENST00000492858 CNMDO75829 334 aa14.89□□□□□ -0.03
GPNMB-214ENST00000492858 MYCNP04198 464 aaPredicted RBP14.89□□□□□ -0.03
GPNMB-214ENST00000492858 HOXC6P09630 235 aa14.89□□□□□ -0.03
GPNMB-214ENST00000492858 UBTFL1P0CB47 393 aaPredicted RBP14.89□□□□□ -0.03
GPNMB-214ENST00000492858 MVPQ14764 893 aaKnown RBP14.89□□□□□ -0.03
GPNMB-214ENST00000492858 ANO1Q5XXA6 986 aa14.89□□□□□ -0.03
GPNMB-214ENST00000492858 USP17L2Q6R6M4 530 aa14.89□□□□□ -0.03
GPNMB-214ENST00000492858 PI16Q6UXB8 463 aa14.89□□□□□ -0.03
GPNMB-214ENST00000492858 TBC1D9Q6ZT07 1266 aa14.89□□□□□ -0.03
GPNMB-214ENST00000492858 SH3RF1Q7Z6J0 888 aa14.89□□□□□ -0.03
GPNMB-214ENST00000492858 CRACR2BQ8N4Y2 399 aaPredicted RBP14.89□□□□□ -0.03
GPNMB-214ENST00000492858 ARRDC4Q8NCT1 418 aa14.89□□□□□ -0.03
GPNMB-214ENST00000492858 NPLOC4Q8TAT6 608 aa14.89□□□□□ -0.03
GPNMB-214ENST00000492858 SH3RF3Q8TEJ3 882 aaPredicted RBP14.89□□□□□ -0.03
GPNMB-214ENST00000492858 TRIM43Q96BQ3 446 aaPredicted RBP14.89□□□□□ -0.03
GPNMB-214ENST00000492858 RNPC3Q96LT9 517 aaKnown RBP14.89□□□□□ -0.03
GPNMB-214ENST00000492858 TRIM34Q9BYJ4 488 aa14.89□□□□□ -0.03
GPNMB-214ENST00000492858 DHX36Q9H2U1 1008 aaKnown RBP14.89□□□□□ -0.03
GPNMB-214ENST00000492858 DNAJC18Q9H819 358 aa14.89□□□□□ -0.03
GPNMB-214ENST00000492858 RAI14Q9P0K7 980 aa14.89□□□□□ -0.03
GPNMB-214ENST00000492858 ZBTB21Q9ULJ3 1066 aa14.89□□□□□ -0.03
GPNMB-214ENST00000492858 IVNS1ABPQ9Y6Y0 642 aa14.89□□□□□ -0.03
GPNMB-214ENST00000492858 PLA2G5P39877 138 aa14.88□□□□□ -0.03
GPNMB-214ENST00000492858 GRB14Q14449 540 aa14.88□□□□□ -0.03
GPNMB-214ENST00000492858 GRIN2CQ14957 1233 aa14.88□□□□□ -0.03
GPNMB-214ENST00000492858 NOL10Q9BSC4 688 aaKnown RBP14.88□□□□□ -0.03
GPNMB-214ENST00000492858 MRS2Q9HD23 443 aa14.88□□□□□ -0.03
GPNMB-214ENST00000492858 GINM1Q9NU53 330 aa14.88□□□□□ -0.03
GPNMB-214ENST00000492858 HMG20BQ9P0W2 317 aa14.88□□□□□ -0.03
GPNMB-214ENST00000492858 USP17L15C9J2P7 530 aa14.87□□□□□ -0.03
GPNMB-214ENST00000492858 USP17L13C9JLJ4 530 aa14.87□□□□□ -0.03
GPNMB-214ENST00000492858 USP17L11C9JVI0 530 aa14.87□□□□□ -0.03
GPNMB-214ENST00000492858 USP17L18D6R9N7 530 aa14.87□□□□□ -0.03
GPNMB-214ENST00000492858 USP17L22D6RA61 530 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms