RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 FAM227BQ96M60 508 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 AGXT2Q9BYV1 514 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 SIL1Q9H173 461 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 PPP1R37O75864 691 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 RIPK1Q13546 671 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 PTPN21Q16825 1174 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 ANKRD20A8PQ5CZ79 823 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 NLRP14Q86W24 1093 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 CCHCR1Q8TD31 782 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 SPAG5Q96R06 1193 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 CCT8L2Q96SF2 557 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 RABEP2Q9H5N1 569 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 HOOK1Q9UJC3 728 aaKnown RBP10.92□□□□□ -0.66
VPS8-225ENST00000492449 CLIC4Q9Y696 253 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 EMILIN1Q9Y6C2 1016 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 MYO5BQ9ULV0 1848 aa10.91□□□□□ -0.66
VPS8-225ENST00000492449 MROH7-TTC4A0A0A0MT08 1334 aa10.91□□□□□ -0.66
VPS8-225ENST00000492449 MFAP3LO75121 409 aa10.91□□□□□ -0.66
VPS8-225ENST00000492449 TNFRSF8P28908 595 aa10.91□□□□□ -0.66
VPS8-225ENST00000492449 MAGEA8P43361 318 aa10.91□□□□□ -0.66
VPS8-225ENST00000492449 SF3A1Q15459 793 aaKnown RBP10.91□□□□□ -0.66
VPS8-225ENST00000492449 CCDC121Q6ZUS5 278 aa10.91□□□□□ -0.66
VPS8-225ENST00000492449 RPUSD2Q8IZ73 545 aaKnown RBP10.91□□□□□ -0.66
VPS8-225ENST00000492449 CAVIN3Q969G5 261 aa10.91□□□□□ -0.66
VPS8-225ENST00000492449 SPATA31D1Q6ZQQ2 1576 aa10.91□□□□□ -0.66
VPS8-225ENST00000492449 DDX60Q8IY21 1712 aaKnown RBP10.91□□□□□ -0.66
VPS8-225ENST00000492449 CARMIL3Q8ND23 1372 aa10.91□□□□□ -0.66
VPS8-225ENST00000492449 ITIH6Q6UXX5 1313 aa10.91□□□□□ -0.66
VPS8-225ENST00000492449 PPFIA2O75334 1257 aa10.91□□□□□ -0.66
VPS8-225ENST00000492449 GHRP10912 638 aa10.91□□□□□ -0.66
VPS8-225ENST00000492449 NNTQ13423 1086 aa10.91□□□□□ -0.66
VPS8-225ENST00000492449 OS9Q13438 667 aaPredicted RBP10.91□□□□□ -0.66
VPS8-225ENST00000492449 NUTM2DQ5VT03 806 aaPredicted RBP10.91□□□□□ -0.66
VPS8-225ENST00000492449 CWF19L1Q69YN2 538 aaKnown RBP10.91□□□□□ -0.66
VPS8-225ENST00000492449 ZNF572Q7Z3I7 529 aaPredicted RBP10.91□□□□□ -0.66
VPS8-225ENST00000492449 TMTC1Q8IUR5 882 aa10.91□□□□□ -0.66
VPS8-225ENST00000492449 NUTM2AQ8IVF1 878 aaPredicted RBP10.91□□□□□ -0.66
VPS8-225ENST00000492449 TRIM58Q8NG06 486 aa10.91□□□□□ -0.66
VPS8-225ENST00000492449 SCLT1Q96NL6 688 aa10.91□□□□□ -0.66
VPS8-225ENST00000492449 MMS19Q96T76 1030 aa10.91□□□□□ -0.66
VPS8-225ENST00000492449 C15orf41Q9Y2V0 281 aa10.91□□□□□ -0.66
VPS8-225ENST00000492449 EDC4Q6P2E9 1401 aaKnown RBP10.91□□□□□ -0.66
VPS8-225ENST00000492449 ATP6V1G2O95670 118 aa10.9□□□□□ -0.66
VPS8-225ENST00000492449 ITIH3Q06033 890 aa10.9□□□□□ -0.66
VPS8-225ENST00000492449 IFT88Q13099 833 aa10.9□□□□□ -0.66
VPS8-225ENST00000492449 ZNF662Q6ZS27 426 aa10.9□□□□□ -0.66
VPS8-225ENST00000492449 CNGA4Q8IV77 575 aa10.9□□□□□ -0.66
VPS8-225ENST00000492449 KIRREL3Q8IZU9 778 aa10.9□□□□□ -0.66
VPS8-225ENST00000492449 CHCHD3Q9NX63 227 aaKnown RBP10.9□□□□□ -0.66
VPS8-225ENST00000492449 A0A0D9SFI3 127 aa10.9□□□□□ -0.66
VPS8-225ENST00000492449 KIF3BO15066 747 aa10.9□□□□□ -0.66
VPS8-225ENST00000492449 PPP1R12BO60237 982 aaPredicted RBP10.9□□□□□ -0.66
VPS8-225ENST00000492449 HMGB1P09429 215 aaKnown RBP10.9□□□□□ -0.66
VPS8-225ENST00000492449 SYKP43405 635 aa10.9□□□□□ -0.66
VPS8-225ENST00000492449 E2F5Q15329 346 aa10.9□□□□□ -0.66
VPS8-225ENST00000492449 EMBQ6PCB8 327 aa10.9□□□□□ -0.66
VPS8-225ENST00000492449 CD302Q8IX05 232 aa10.9□□□□□ -0.66
VPS8-225ENST00000492449 CLASRPQ8N2M8 674 aaKnown RBP10.9□□□□□ -0.66
VPS8-225ENST00000492449 ZFAND2BQ8WV99 257 aa10.9□□□□□ -0.66
VPS8-225ENST00000492449 CUL5Q93034 780 aa10.9□□□□□ -0.66
VPS8-225ENST00000492449 ARL8AQ96BM9 186 aa10.9□□□□□ -0.66
VPS8-225ENST00000492449 HAUS2Q9NVX0 235 aa10.9□□□□□ -0.66
VPS8-225ENST00000492449 TBC1D2BQ9UPU7 963 aa10.9□□□□□ -0.66
VPS8-225ENST00000492449 A6NHS1 94 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 DNM1LO00429 736 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 RPSAP08865 295 aaKnown RBP10.89□□□□□ -0.67
VPS8-225ENST00000492449 GCLCP48506 637 aaPredicted RBP10.89□□□□□ -0.67
VPS8-225ENST00000492449 HDLBPQ00341 1268 aaKnown RBP10.89□□□□□ -0.67
VPS8-225ENST00000492449 PDE4BQ07343 736 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 RBL2Q08999 1139 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 PSMD2Q13200 908 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 C1QTNF12Q5T7M4 302 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 NT5DC1Q5TFE4 455 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 PPP4R3AQ6IN85 833 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 IQCEQ6IPM2 695 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 APTXQ7Z2E3 356 aaKnown RBP10.89□□□□□ -0.67
VPS8-225ENST00000492449 TRIM74Q86UV6 250 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 TRIM73Q86UV7 250 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 PPFIBP1Q86W92 1011 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 APLFQ8IW19 511 aaPredicted RBP10.89□□□□□ -0.67
VPS8-225ENST00000492449 MMGT1Q8N4V1 131 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 OSBPL7Q9BZF2 842 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 SENP2Q9HC62 589 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 DACH1Q9UI36 760 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 WWC3Q9ULE0 1092 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 PCDHGC5Q9Y5F6 944 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 SAR1BQ9Y6B6 198 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 U3KPZ7 1027 aaPredicted RBP10.89□□□□□ -0.67
VPS8-225ENST00000492449 RFX7Q2KHR2 1363 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 TAF5LO75529 589 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 IMPDH2P12268 514 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 BMP6P22004 513 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 EPHB4P54760 987 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 ROR2Q01974 943 aaKnown RBP10.89□□□□□ -0.67
VPS8-225ENST00000492449 ACCSLQ4AC99 568 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 MCM10Q7L590 875 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 ZNF513Q8N8E2 541 aaPredicted RBP10.89□□□□□ -0.67
VPS8-225ENST00000492449 MLKLQ8NB16 471 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 NSMCE1Q8WV22 266 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 RNPC3Q96LT9 517 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms