RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 CSF1RP07333 972 aa17.31■□□□□ 0.36
TNFRSF1B-203ENST00000492361 ADGRA1Q86SQ6 560 aa17.31■□□□□ 0.36
TNFRSF1B-203ENST00000492361 ANKRD7Q92527 254 aa17.31■□□□□ 0.36
TNFRSF1B-203ENST00000492361 DEXIO95424 95 aa17.3■□□□□ 0.36
TNFRSF1B-203ENST00000492361 MMP1P03956 469 aa17.3■□□□□ 0.36
TNFRSF1B-203ENST00000492361 FAM193AP78312 1265 aa17.3■□□□□ 0.36
TNFRSF1B-203ENST00000492361 DZIP1Q86YF9 867 aaKnown RBP17.3■□□□□ 0.36
TNFRSF1B-203ENST00000492361 A0A0U1RQJ8 604 aa17.3■□□□□ 0.36
TNFRSF1B-203ENST00000492361 MARCH6O60337 910 aa17.3■□□□□ 0.36
TNFRSF1B-203ENST00000492361 EARS2Q5JPH6 523 aaKnown RBP17.3■□□□□ 0.36
TNFRSF1B-203ENST00000492361 HEATR3Q7Z4Q2 680 aa17.3■□□□□ 0.36
TNFRSF1B-203ENST00000492361 ATRIPQ8WXE1 791 aa17.3■□□□□ 0.36
TNFRSF1B-203ENST00000492361 DRC1Q96MC2 740 aa17.3■□□□□ 0.36
TNFRSF1B-203ENST00000492361 FAM217BQ9NTX9 383 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF1B-203ENST00000492361 TACC3Q9Y6A5 838 aa17.3■□□□□ 0.36
TNFRSF1B-203ENST00000492361 CTIFO43310 598 aaKnown RBP17.3■□□□□ 0.36
TNFRSF1B-203ENST00000492361 PTGDRQ13258 359 aa17.3■□□□□ 0.36
TNFRSF1B-203ENST00000492361 RILPL1Q5EBL4 403 aa17.3■□□□□ 0.36
TNFRSF1B-203ENST00000492361 CRACR2BQ8N4Y2 399 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF1B-203ENST00000492361 KRT2P35908 639 aa17.29■□□□□ 0.36
TNFRSF1B-203ENST00000492361 TOB1P50616 345 aaPredicted RBP17.29■□□□□ 0.36
TNFRSF1B-203ENST00000492361 TNS3Q68CZ2 1445 aa17.29■□□□□ 0.36
TNFRSF1B-203ENST00000492361 VEGFAP15692 232 aaPredicted RBP17.29■□□□□ 0.36
TNFRSF1B-203ENST00000492361 KLRK1P26718 216 aa17.29■□□□□ 0.36
TNFRSF1B-203ENST00000492361 DMTNQ08495 405 aa17.29■□□□□ 0.36
TNFRSF1B-203ENST00000492361 ERFEQ4G0M1 354 aa17.29■□□□□ 0.36
TNFRSF1B-203ENST00000492361 IMPACTQ9P2X3 320 aa17.29■□□□□ 0.36
TNFRSF1B-203ENST00000492361 DACH1Q9UI36 760 aa17.29■□□□□ 0.36
TNFRSF1B-203ENST00000492361 CEP131Q9UPN4 1083 aa17.29■□□□□ 0.36
TNFRSF1B-203ENST00000492361 KIF13AQ9H1H9 1805 aa17.29■□□□□ 0.36
TNFRSF1B-203ENST00000492361 SSBP05455 408 aaKnown RBP eCLIP17.29■□□□□ 0.36
TNFRSF1B-203ENST00000492361 BMP6P22004 513 aa17.29■□□□□ 0.36
TNFRSF1B-203ENST00000492361 CLCN6P51797 869 aa17.29■□□□□ 0.36
TNFRSF1B-203ENST00000492361 TSR1Q2NL82 804 aaKnown RBP17.29■□□□□ 0.36
TNFRSF1B-203ENST00000492361 RESP18Q5W5W9 173 aa17.29■□□□□ 0.36
TNFRSF1B-203ENST00000492361 NOL10Q9BSC4 688 aaKnown RBP17.29■□□□□ 0.36
TNFRSF1B-203ENST00000492361 F8W031 263 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF1B-203ENST00000492361 KIF2AO00139 706 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF1B-203ENST00000492361 FMNL1O95466 1100 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF1B-203ENST00000492361 EIF6P56537 245 aaKnown RBP17.28■□□□□ 0.36
TNFRSF1B-203ENST00000492361 PTPAQ15257 358 aa17.28■□□□□ 0.36
TNFRSF1B-203ENST00000492361 CCDC87Q9NVE4 849 aa17.28■□□□□ 0.36
TNFRSF1B-203ENST00000492361 GUCA1BQ9UMX6 200 aa17.28■□□□□ 0.36
TNFRSF1B-203ENST00000492361 SPECC1LQ69YQ0 1117 aa17.28■□□□□ 0.36
TNFRSF1B-203ENST00000492361 CAPZA3Q96KX2 299 aa17.28■□□□□ 0.36
TNFRSF1B-203ENST00000492361 CDC5LQ99459 802 aaKnown RBP17.28■□□□□ 0.36
TNFRSF1B-203ENST00000492361 NYAP1Q6ZVC0 841 aa17.28■□□□□ 0.36
TNFRSF1B-203ENST00000492361 DYNLL2Q96FJ2 89 aa17.28■□□□□ 0.36
TNFRSF1B-203ENST00000492361 SLF1Q9BQI6 1058 aa17.28■□□□□ 0.36
TNFRSF1B-203ENST00000492361 IFNAR1P17181 557 aa17.27■□□□□ 0.36
TNFRSF1B-203ENST00000492361 ANKRD20A12PQ8NF67 263 aa17.27■□□□□ 0.36
TNFRSF1B-203ENST00000492361 FEZ1Q99689 392 aa17.27■□□□□ 0.36
TNFRSF1B-203ENST00000492361 TFR2Q9UP52 801 aa17.27■□□□□ 0.36
TNFRSF1B-203ENST00000492361 LOC102724428A0A0B4J2F2 783 aa17.27■□□□□ 0.35
TNFRSF1B-203ENST00000492361 PRDX5P30044 214 aa17.27■□□□□ 0.35
TNFRSF1B-203ENST00000492361 SIK1P57059 783 aa17.27■□□□□ 0.35
TNFRSF1B-203ENST00000492361 PPP2R3AQ06190 1150 aa17.27■□□□□ 0.35
TNFRSF1B-203ENST00000492361 WWC2Q6AWC2 1192 aa17.27■□□□□ 0.35
TNFRSF1B-203ENST00000492361 SLC51AQ86UW1 340 aa17.27■□□□□ 0.35
TNFRSF1B-203ENST00000492361 ACRBPQ8NEB7 543 aa17.27■□□□□ 0.35
TNFRSF1B-203ENST00000492361 PLEKHA4Q9H4M7 779 aa17.27■□□□□ 0.35
TNFRSF1B-203ENST00000492361 MROH5Q6ZUA9 1318 aa17.27■□□□□ 0.35
TNFRSF1B-203ENST00000492361 PP2D1A8MPX8 630 aa17.27■□□□□ 0.35
TNFRSF1B-203ENST00000492361 WNT7AO00755 349 aa17.27■□□□□ 0.35
TNFRSF1B-203ENST00000492361 RBL2Q08999 1139 aa17.27■□□□□ 0.35
TNFRSF1B-203ENST00000492361 NTRK3Q16288 839 aa17.27■□□□□ 0.35
TNFRSF1B-203ENST00000492361 TTC38Q5R3I4 469 aa17.27■□□□□ 0.35
TNFRSF1B-203ENST00000492361 NBPF5PQ86XG9 351 aaPredicted RBP17.27■□□□□ 0.35
TNFRSF1B-203ENST00000492361 VSTM4Q8IW00 320 aa17.27■□□□□ 0.35
TNFRSF1B-203ENST00000492361 SRP68Q9UHB9 627 aaKnown RBP17.27■□□□□ 0.35
TNFRSF1B-203ENST00000492361 CASP14P31944 242 aa17.26■□□□□ 0.35
TNFRSF1B-203ENST00000492361 NAP1L1P55209 391 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1B-203ENST00000492361 CELF1Q92879 486 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1B-203ENST00000492361 TRIM34Q9BYJ4 488 aa17.26■□□□□ 0.35
TNFRSF1B-203ENST00000492361 OSBPL5Q9H0X9 879 aaPredicted RBP17.26■□□□□ 0.35
TNFRSF1B-203ENST00000492361 AKR1B15C9JRZ8 316 aaPredicted RBP17.26■□□□□ 0.35
TNFRSF1B-203ENST00000492361 KIF5CO60282 957 aa17.26■□□□□ 0.35
TNFRSF1B-203ENST00000492361 PPP6R2O75170 966 aa17.26■□□□□ 0.35
TNFRSF1B-203ENST00000492361 EIF5P55010 431 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1B-203ENST00000492361 BMS1Q14692 1282 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1B-203ENST00000492361 ENAHQ8N8S7 591 aaPredicted RBP17.26■□□□□ 0.35
TNFRSF1B-203ENST00000492361 ZSCAN10Q96SZ4 725 aaPredicted RBP17.26■□□□□ 0.35
TNFRSF1B-203ENST00000492361 PSMB7Q99436 277 aa17.26■□□□□ 0.35
TNFRSF1B-203ENST00000492361 ZHX3Q9H4I2 956 aa17.26■□□□□ 0.35
TNFRSF1B-203ENST00000492361 CCDC194A0A1B0GVG4 234 aa17.25■□□□□ 0.35
TNFRSF1B-203ENST00000492361 USP17L8P0C7I0 530 aa17.25■□□□□ 0.35
TNFRSF1B-203ENST00000492361 MATR3P43243 847 aaKnown RBP eCLIP17.25■□□□□ 0.352e-7■□□□□ 10.4
TNFRSF1B-203ENST00000492361 TNNT3P45378 269 aaPredicted RBP17.25■□□□□ 0.35
TNFRSF1B-203ENST00000492361 C3orf67Q6ZVT6 689 aa17.25■□□□□ 0.35
TNFRSF1B-203ENST00000492361 SLC44A5Q8NCS7 719 aa17.25■□□□□ 0.35
TNFRSF1B-203ENST00000492361 SYNRGQ9UMZ2 1314 aa17.25■□□□□ 0.35
TNFRSF1B-203ENST00000492361 RGPD5Q99666 1765 aa17.25■□□□□ 0.35
TNFRSF1B-203ENST00000492361 ZBTB22O15209 634 aa17.25■□□□□ 0.35
TNFRSF1B-203ENST00000492361 CCP110O43303 1012 aa17.25■□□□□ 0.35
TNFRSF1B-203ENST00000492361 MRPS25P82663 173 aaKnown RBP17.25■□□□□ 0.35
TNFRSF1B-203ENST00000492361 CCDC178Q5BJE1 867 aa17.25■□□□□ 0.35
TNFRSF1B-203ENST00000492361 CCDC102AQ96A19 550 aa17.25■□□□□ 0.35
TNFRSF1B-203ENST00000492361 DDX41Q9UJV9 622 aaKnown RBP17.25■□□□□ 0.35
TNFRSF1B-203ENST00000492361 PRDM4Q9UKN5 801 aa17.25■□□□□ 0.35
TNFRSF1B-203ENST00000492361 STAT6P42226 847 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms