RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 MYO5AQ9Y4I1 1855 aaKnown RBP10.64□□□□□ -0.71
NUP50-217ENST00000491860 USP17L10C9JJH3 530 aa10.63□□□□□ -0.71
NUP50-217ENST00000491860 DLL1O00548 723 aa10.63□□□□□ -0.71
NUP50-217ENST00000491860 ADCY3O60266 1144 aa10.63□□□□□ -0.71
NUP50-217ENST00000491860 IFIT2P09913 472 aaKnown RBP10.63□□□□□ -0.71
NUP50-217ENST00000491860 HOXA7P31268 230 aaPredicted RBP10.63□□□□□ -0.71
NUP50-217ENST00000491860 HMGCS2P54868 508 aa10.63□□□□□ -0.71
NUP50-217ENST00000491860 BACE1P56817 501 aa10.63□□□□□ -0.71
NUP50-217ENST00000491860 IRX3P78415 501 aaPredicted RBP10.63□□□□□ -0.71
NUP50-217ENST00000491860 PRKCZQ05513 592 aa10.63□□□□□ -0.71
NUP50-217ENST00000491860 MAGEB6Q8N7X4 407 aa10.63□□□□□ -0.71
NUP50-217ENST00000491860 PANK1Q8TE04 598 aa10.63□□□□□ -0.71
NUP50-217ENST00000491860 SERPINB13Q9UIV8 391 aa10.63□□□□□ -0.71
NUP50-217ENST00000491860 EXOC6BQ9Y2D4 811 aa10.63□□□□□ -0.71
NUP50-217ENST00000491860 NR2E3Q9Y5X4 410 aa10.63□□□□□ -0.71
NUP50-217ENST00000491860 FAM196BA6NMK8 535 aa10.62□□□□□ -0.71
NUP50-217ENST00000491860 CTGFP29279 349 aa10.62□□□□□ -0.71
NUP50-217ENST00000491860 FLT3LGP49771 235 aa10.62□□□□□ -0.71
NUP50-217ENST00000491860 USP14P54578 494 aa10.62□□□□□ -0.71
NUP50-217ENST00000491860 MTFR1Q15390 333 aa10.62□□□□□ -0.71
NUP50-217ENST00000491860 TREML2Q5T2D2 321 aa10.62□□□□□ -0.71
NUP50-217ENST00000491860 ADGRA1Q86SQ6 560 aa10.62□□□□□ -0.71
NUP50-217ENST00000491860 ANKRD13CQ8N6S4 541 aa10.62□□□□□ -0.71
NUP50-217ENST00000491860 SLC17A8Q8NDX2 589 aa10.62□□□□□ -0.71
NUP50-217ENST00000491860 DPF3Q92784 378 aa10.62□□□□□ -0.71
NUP50-217ENST00000491860 CRNKL1Q9BZJ0 848 aaKnown RBP10.62□□□□□ -0.71
NUP50-217ENST00000491860 RNF208Q9H0X6 261 aa10.62□□□□□ -0.71
NUP50-217ENST00000491860 ZBTB40Q9NUA8 1239 aa10.62□□□□□ -0.71
NUP50-217ENST00000491860 TLR7Q9NYK1 1049 aaKnown RBP10.62□□□□□ -0.71
NUP50-217ENST00000491860 PALD1Q9ULE6 856 aa10.62□□□□□ -0.71
NUP50-217ENST00000491860 ZBTB21Q9ULJ3 1066 aa10.62□□□□□ -0.71
NUP50-217ENST00000491860 SIPA1L1O43166 1804 aa10.62□□□□□ -0.71
NUP50-217ENST00000491860 MYCP01106 439 aaPredicted RBP10.61□□□□□ -0.71
NUP50-217ENST00000491860 CCL5P13501 91 aa10.61□□□□□ -0.71
NUP50-217ENST00000491860 MTMR2Q13614 643 aa10.61□□□□□ -0.71
NUP50-217ENST00000491860 PDE3AQ14432 1141 aa10.61□□□□□ -0.71
NUP50-217ENST00000491860 TATDN1Q6P1N9 297 aa10.61□□□□□ -0.71
NUP50-217ENST00000491860 USP17L2Q6R6M4 530 aa10.61□□□□□ -0.71
NUP50-217ENST00000491860 TRMT44Q8IYL2 757 aaKnown RBP10.61□□□□□ -0.71
NUP50-217ENST00000491860 SOCS4Q8WXH5 440 aa10.61□□□□□ -0.71
NUP50-217ENST00000491860 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.61□□□□□ -0.71
NUP50-217ENST00000491860 ASCC2Q9H1I8 757 aaPredicted RBP10.61□□□□□ -0.71
NUP50-217ENST00000491860 CABP5Q9NP86 173 aa10.61□□□□□ -0.71
NUP50-217ENST00000491860 MORF4L1Q9UBU8 362 aa10.61□□□□□ -0.71
NUP50-217ENST00000491860 RCAN3Q9UKA8 241 aa10.61□□□□□ -0.71
NUP50-217ENST00000491860 DOCK3Q8IZD9 2030 aa10.6□□□□□ -0.71
NUP50-217ENST00000491860 A0A0C4DFX4 3053 aa10.6□□□□□ -0.71
NUP50-217ENST00000491860 MAGEB6P1A0A0J9YX57 407 aa10.6□□□□□ -0.71
NUP50-217ENST00000491860 MAPK4P31152 587 aa10.6□□□□□ -0.71
NUP50-217ENST00000491860 DYNLL1P63167 89 aaKnown RBP10.6□□□□□ -0.71
NUP50-217ENST00000491860 SLC9C2Q5TAH2 1124 aa10.6□□□□□ -0.71
NUP50-217ENST00000491860 CCAR1Q8IX12 1150 aaKnown RBP10.6□□□□□ -0.71
NUP50-217ENST00000491860 AMOTL1Q8IY63 956 aa10.6□□□□□ -0.71
NUP50-217ENST00000491860 MIGA1Q8NAN2 632 aa10.6□□□□□ -0.71
NUP50-217ENST00000491860 GPRC5AQ8NFJ5 357 aa10.6□□□□□ -0.71
NUP50-217ENST00000491860 DNAJC18Q9H819 358 aa10.6□□□□□ -0.71
NUP50-217ENST00000491860 IL1RAPL2Q9NP60 686 aa10.6□□□□□ -0.71
NUP50-217ENST00000491860 SAP30BPQ9UHR5 308 aaKnown RBP10.6□□□□□ -0.71
NUP50-217ENST00000491860 NAV1Q8NEY1 1877 aa10.59□□□□□ -0.71
NUP50-217ENST00000491860 GLRX3O76003 335 aaKnown RBP10.59□□□□□ -0.71
NUP50-217ENST00000491860 ECM2O94769 699 aaPredicted RBP10.59□□□□□ -0.71
NUP50-217ENST00000491860 SGPL1O95470 568 aa10.59□□□□□ -0.71
NUP50-217ENST00000491860 HMGCRP04035 888 aa10.59□□□□□ -0.71
NUP50-217ENST00000491860 INHAP05111 366 aa10.59□□□□□ -0.71
NUP50-217ENST00000491860 POLR3DP05423 398 aaPredicted RBP10.59□□□□□ -0.71
NUP50-217ENST00000491860 SLURP2P0DP57 97 aa10.59□□□□□ -0.71
NUP50-217ENST00000491860 MNX1P50219 401 aaPredicted RBP10.59□□□□□ -0.71
NUP50-217ENST00000491860 CCNA1P78396 465 aa10.59□□□□□ -0.71
NUP50-217ENST00000491860 RRP1BQ14684 758 aaKnown RBP10.59□□□□□ -0.71
NUP50-217ENST00000491860 ABCB5Q2M3G0 1257 aa10.59□□□□□ -0.71
NUP50-217ENST00000491860 CERKLQ49MI3 558 aaPredicted RBP10.59□□□□□ -0.71
NUP50-217ENST00000491860 ZSCAN25Q6NSZ9 544 aa10.59□□□□□ -0.71
NUP50-217ENST00000491860 GPR153Q6NV75 609 aa10.59□□□□□ -0.71
NUP50-217ENST00000491860 CCDC84Q86UT8 332 aaPredicted RBP10.59□□□□□ -0.71
NUP50-217ENST00000491860 U2AF1L4Q8WU68 220 aaKnown RBP10.59□□□□□ -0.71
NUP50-217ENST00000491860 DDRGK1Q96HY6 314 aa10.59□□□□□ -0.71
NUP50-217ENST00000491860 C12orf42Q96LP6 360 aa10.59□□□□□ -0.71
NUP50-217ENST00000491860 FEZ1Q99689 392 aa10.59□□□□□ -0.71
NUP50-217ENST00000491860 RIOK1Q9BRS2 568 aaKnown RBP10.59□□□□□ -0.71
NUP50-217ENST00000491860 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.59□□□□□ -0.71
NUP50-217ENST00000491860 SWAP70Q9UH65 585 aa10.59□□□□□ -0.71
NUP50-217ENST00000491860 GABRQQ9UN88 632 aa10.59□□□□□ -0.71
NUP50-217ENST00000491860 COG6Q9Y2V7 657 aa10.59□□□□□ -0.71
NUP50-217ENST00000491860 LAMA3Q16787 3333 aa10.59□□□□□ -0.71
NUP50-217ENST00000491860 USP17L15C9J2P7 530 aa10.58□□□□□ -0.72
NUP50-217ENST00000491860 USP17L13C9JLJ4 530 aa10.58□□□□□ -0.72
NUP50-217ENST00000491860 USP17L11C9JVI0 530 aa10.58□□□□□ -0.72
NUP50-217ENST00000491860 USP17L18D6R9N7 530 aa10.58□□□□□ -0.72
NUP50-217ENST00000491860 USP17L22D6RA61 530 aa10.58□□□□□ -0.72
NUP50-217ENST00000491860 USP17L17D6RBQ6 530 aa10.58□□□□□ -0.72
NUP50-217ENST00000491860 USP17L19D6RCP7 530 aa10.58□□□□□ -0.72
NUP50-217ENST00000491860 USP17L20D6RJB6 530 aa10.58□□□□□ -0.72
NUP50-217ENST00000491860 FARP2O94887 1054 aaPredicted RBP10.58□□□□□ -0.72
NUP50-217ENST00000491860 GDF11O95390 407 aa10.58□□□□□ -0.72
NUP50-217ENST00000491860 GH2P01242 217 aa10.58□□□□□ -0.72
NUP50-217ENST00000491860 XRCC5P13010 732 aaKnown RBP10.58□□□□□ -0.72
NUP50-217ENST00000491860 PDE6AP16499 860 aa10.58□□□□□ -0.72
NUP50-217ENST00000491860 ATP5JP18859 108 aa10.58□□□□□ -0.72
NUP50-217ENST00000491860 HERVK_113P62684 666 aa10.58□□□□□ -0.72
NUP50-217ENST00000491860 USP17L24Q0WX57 530 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms