RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 PLEKHM2Q8IWE5 1019 aa18.15■□□□□ 0.5
CDC42SE1-205ENST00000491825 PROCA1Q8NCQ7 364 aaPredicted RBP18.15■□□□□ 0.5
CDC42SE1-205ENST00000491825 RAET1EQ8TD07 263 aa18.15■□□□□ 0.5
CDC42SE1-205ENST00000491825 ANTXR1Q9H6X2 564 aa18.15■□□□□ 0.5
CDC42SE1-205ENST00000491825 DNAJC18Q9H819 358 aa18.15■□□□□ 0.5
CDC42SE1-205ENST00000491825 HERC5Q9UII4 1024 aaKnown RBP18.15■□□□□ 0.5
CDC42SE1-205ENST00000491825 GABRQQ9UN88 632 aa18.15■□□□□ 0.5
CDC42SE1-205ENST00000491825 SIPA1L1O43166 1804 aa18.14■□□□□ 0.5
CDC42SE1-205ENST00000491825 METTL16Q86W50 562 aaKnown RBP18.14■□□□□ 0.49
CDC42SE1-205ENST00000491825 ZNF280CQ8ND82 737 aa18.14■□□□□ 0.49
CDC42SE1-205ENST00000491825 TBC1D2Q9BYX2 928 aa18.14■□□□□ 0.49
CDC42SE1-205ENST00000491825 DHX36Q9H2U1 1008 aaKnown RBP18.14■□□□□ 0.49
CDC42SE1-205ENST00000491825 FLT1P17948 1338 aa18.14■□□□□ 0.49
CDC42SE1-205ENST00000491825 LOC285556D6RIA3 1793 aa18.13■□□□□ 0.49
CDC42SE1-205ENST00000491825 BAG3O95817 575 aa18.13■□□□□ 0.49
CDC42SE1-205ENST00000491825 PLCG2P16885 1265 aa18.13■□□□□ 0.49
CDC42SE1-205ENST00000491825 PDE4AP27815 886 aa18.13■□□□□ 0.49
CDC42SE1-205ENST00000491825 MAP3K12Q12852 859 aa18.13■□□□□ 0.49
CDC42SE1-205ENST00000491825 SPP2Q13103 211 aa18.13■□□□□ 0.49
CDC42SE1-205ENST00000491825 SH3D19Q5HYK7 790 aa18.13■□□□□ 0.49
CDC42SE1-205ENST00000491825 SMCR8Q8TEV9 937 aaPredicted RBP18.13■□□□□ 0.49
CDC42SE1-205ENST00000491825 PI4KBQ9UBF8 816 aa18.13■□□□□ 0.49
CDC42SE1-205ENST00000491825 IDH1O75874 414 aaKnown RBP18.12■□□□□ 0.49
CDC42SE1-205ENST00000491825 JAG1P78504 1218 aa18.12■□□□□ 0.49
CDC42SE1-205ENST00000491825 FAM110CQ1W6H9 321 aa18.12■□□□□ 0.49
CDC42SE1-205ENST00000491825 UBE2Q1Q7Z7E8 422 aa18.12■□□□□ 0.49
CDC42SE1-205ENST00000491825 MAPKAPK5Q8IW41 473 aa18.12■□□□□ 0.49
CDC42SE1-205ENST00000491825 SLAIN1Q8ND83 568 aa18.12■□□□□ 0.49
CDC42SE1-205ENST00000491825 TGFBRAP1Q8WUH2 860 aa18.12■□□□□ 0.49
CDC42SE1-205ENST00000491825 EDC3Q96F86 508 aaKnown RBP18.12■□□□□ 0.49
CDC42SE1-205ENST00000491825 NOL10Q9BSC4 688 aaKnown RBP18.12■□□□□ 0.49
CDC42SE1-205ENST00000491825 USP17L5A8MUK1 530 aa18.11■□□□□ 0.49
CDC42SE1-205ENST00000491825 GJB1P08034 283 aa18.11■□□□□ 0.49
CDC42SE1-205ENST00000491825 CCL5P13501 91 aa18.11■□□□□ 0.49
CDC42SE1-205ENST00000491825 GJA8P48165 433 aa18.11■□□□□ 0.49
CDC42SE1-205ENST00000491825 FLT3LGP49771 235 aa18.11■□□□□ 0.49
CDC42SE1-205ENST00000491825 HMGCS2P54868 508 aa18.11■□□□□ 0.49
CDC42SE1-205ENST00000491825 HABP4Q5JVS0 413 aaKnown RBP18.11■□□□□ 0.49
CDC42SE1-205ENST00000491825 KBTBD3Q8NAB2 608 aa18.11■□□□□ 0.49
CDC42SE1-205ENST00000491825 TNPO2O14787 897 aaKnown RBP18.1■□□□□ 0.49
CDC42SE1-205ENST00000491825 IRF5Q13568 498 aa18.1■□□□□ 0.49
CDC42SE1-205ENST00000491825 SHROOM1Q2M3G4 852 aaPredicted RBP18.1■□□□□ 0.49
CDC42SE1-205ENST00000491825 TICAM2Q86XR7 235 aa18.1■□□□□ 0.49
CDC42SE1-205ENST00000491825 ANKRD13CQ8N6S4 541 aa18.1■□□□□ 0.49
CDC42SE1-205ENST00000491825 WDR18Q9BV38 432 aa18.1■□□□□ 0.49
CDC42SE1-205ENST00000491825 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.1■□□□□ 0.49
CDC42SE1-205ENST00000491825 PNMA3Q9UL41 463 aa18.1■□□□□ 0.49
CDC42SE1-205ENST00000491825 ADCY3O60266 1144 aa18.09■□□□□ 0.49
CDC42SE1-205ENST00000491825 PDE6AP16499 860 aa18.09■□□□□ 0.49
CDC42SE1-205ENST00000491825 DYNLL1P63167 89 aaKnown RBP18.09■□□□□ 0.49
CDC42SE1-205ENST00000491825 UBXN2AP68543 259 aa18.09■□□□□ 0.49
CDC42SE1-205ENST00000491825 NKX2-3Q8TAU0 364 aa18.09■□□□□ 0.49
CDC42SE1-205ENST00000491825 PXYLP1Q8TE99 480 aa18.09■□□□□ 0.49
CDC42SE1-205ENST00000491825 PCDH10Q9P2E7 1040 aa18.09■□□□□ 0.49
CDC42SE1-205ENST00000491825 PALD1Q9ULE6 856 aa18.09■□□□□ 0.49
CDC42SE1-205ENST00000491825 FOCADQ5VW36 1801 aa18.09■□□□□ 0.49
CDC42SE1-205ENST00000491825 TCRBV5S4A2TA0A5A2 114 aa18.08■□□□□ 0.48
CDC42SE1-205ENST00000491825 ASNSP08243 561 aa18.08■□□□□ 0.48
CDC42SE1-205ENST00000491825 ELNP15502 786 aa18.08■□□□□ 0.48
CDC42SE1-205ENST00000491825 CYP7A1P22680 504 aa18.08■□□□□ 0.48
CDC42SE1-205ENST00000491825 ADD2P35612 726 aa18.08■□□□□ 0.48
CDC42SE1-205ENST00000491825 SLC9C2Q5TAH2 1124 aa18.08■□□□□ 0.48
CDC42SE1-205ENST00000491825 ZSCAN25Q6NSZ9 544 aa18.08■□□□□ 0.48
CDC42SE1-205ENST00000491825 CERS3Q8IU89 383 aa18.08■□□□□ 0.48
CDC42SE1-205ENST00000491825 FOXP4Q8IVH2 680 aaPredicted RBP18.08■□□□□ 0.48
CDC42SE1-205ENST00000491825 MAGEB6Q8N7X4 407 aa18.08■□□□□ 0.48
CDC42SE1-205ENST00000491825 EVI5LQ96CN4 794 aa18.08■□□□□ 0.48
CDC42SE1-205ENST00000491825 RNF208Q9H0X6 261 aa18.08■□□□□ 0.48
CDC42SE1-205ENST00000491825 UNC93B1Q9H1C4 597 aa18.08■□□□□ 0.48
CDC42SE1-205ENST00000491825 ASCC2Q9H1I8 757 aaPredicted RBP18.08■□□□□ 0.48
CDC42SE1-205ENST00000491825 AS3MTQ9HBK9 375 aa18.08■□□□□ 0.48
CDC42SE1-205ENST00000491825 MGAMO43451 1857 aa18.07■□□□□ 0.48
CDC42SE1-205ENST00000491825 ATAD5Q96QE3 1844 aa18.07■□□□□ 0.48
CDC42SE1-205ENST00000491825 GCLCP48506 637 aaPredicted RBP18.07■□□□□ 0.48
CDC42SE1-205ENST00000491825 BACE1P56817 501 aa18.07■□□□□ 0.48
CDC42SE1-205ENST00000491825 PABPC4Q13310 644 aaKnown RBP eCLIP18.07■□□□□ 0.48
CDC42SE1-205ENST00000491825 MTMR2Q13614 643 aa18.07■□□□□ 0.48
CDC42SE1-205ENST00000491825 UBE3CQ15386 1083 aa18.07■□□□□ 0.48
CDC42SE1-205ENST00000491825 LRRFIP1Q32MZ4 808 aaKnown RBP18.07■□□□□ 0.48
CDC42SE1-205ENST00000491825 U2AF1L4Q8WU68 220 aaKnown RBP18.07■□□□□ 0.48
CDC42SE1-205ENST00000491825 BIN2Q9UBW5 565 aaPredicted RBP18.07■□□□□ 0.48
CDC42SE1-205ENST00000491825 ZBTB21Q9ULJ3 1066 aa18.07■□□□□ 0.48
CDC42SE1-205ENST00000491825 CDK5RAP2Q96SN8 1893 aa18.07■□□□□ 0.48
CDC42SE1-205ENST00000491825 ZNF532Q9HCE3 1301 aa18.06■□□□□ 0.48
CDC42SE1-205ENST00000491825 INHAP05111 366 aa18.06■□□□□ 0.48
CDC42SE1-205ENST00000491825 ZFYP08048 801 aaPredicted RBP18.06■□□□□ 0.48
CDC42SE1-205ENST00000491825 HOXA7P31268 230 aaPredicted RBP18.06■□□□□ 0.48
CDC42SE1-205ENST00000491825 MIGA1Q8NAN2 632 aa18.06■□□□□ 0.48
CDC42SE1-205ENST00000491825 GINM1Q9NU53 330 aa18.06■□□□□ 0.48
CDC42SE1-205ENST00000491825 MORF4L1Q9UBU8 362 aa18.06■□□□□ 0.48
CDC42SE1-205ENST00000491825 SAP30BPQ9UHR5 308 aaKnown RBP18.06■□□□□ 0.48
CDC42SE1-205ENST00000491825 RANBP2P49792 3224 aaKnown RBP18.06■□□□□ 0.48
CDC42SE1-205ENST00000491825 GDF11O95390 407 aa18.05■□□□□ 0.48
CDC42SE1-205ENST00000491825 TTC22Q5TAA0 569 aa18.05■□□□□ 0.48
CDC42SE1-205ENST00000491825 CRACR2BQ8N4Y2 399 aaPredicted RBP18.05■□□□□ 0.48
CDC42SE1-205ENST00000491825 COA7Q96BR5 231 aa18.05■□□□□ 0.48
CDC42SE1-205ENST00000491825 PAK6Q9NQU5 681 aaPredicted RBP18.05■□□□□ 0.48
CDC42SE1-205ENST00000491825 DDX60LQ5H9U9 1706 aaKnown RBP18.04■□□□□ 0.48
CDC42SE1-205ENST00000491825 H0YGN5 161 aa18.04■□□□□ 0.48
CDC42SE1-205ENST00000491825 HLA-DOAP06340 250 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms