RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 BACE1P56817 501 aa22.36■■□□□ 1.17
SMIM4-205ENST00000491607 SHROOM1Q2M3G4 852 aaPredicted RBP22.36■■□□□ 1.17
SMIM4-205ENST00000491607 COA7Q96BR5 231 aa22.36■■□□□ 1.17
SMIM4-205ENST00000491607 RNF208Q9H0X6 261 aa22.36■■□□□ 1.17
SMIM4-205ENST00000491607 ASCC2Q9H1I8 757 aaPredicted RBP22.36■■□□□ 1.17
SMIM4-205ENST00000491607 ZBTB40Q9NUA8 1239 aa22.36■■□□□ 1.17
SMIM4-205ENST00000491607 ZBTB21Q9ULJ3 1066 aa22.36■■□□□ 1.17
SMIM4-205ENST00000491607 MGAMO43451 1857 aa22.36■■□□□ 1.17
SMIM4-205ENST00000491607 IFIT2P09913 472 aaKnown RBP22.35■■□□□ 1.17
SMIM4-205ENST00000491607 GCLCP48506 637 aaPredicted RBP22.35■■□□□ 1.17
SMIM4-205ENST00000491607 TTF1Q15361 905 aaPredicted RBP22.35■■□□□ 1.17
SMIM4-205ENST00000491607 KIAA0100Q14667 2235 aaKnown RBP22.34■■□□□ 1.17
SMIM4-205ENST00000491607 USP17L10C9JJH3 530 aa22.34■■□□□ 1.17
SMIM4-205ENST00000491607 ELNP15502 786 aa22.34■■□□□ 1.17
SMIM4-205ENST00000491607 IRX3P78415 501 aaPredicted RBP22.34■■□□□ 1.17
SMIM4-205ENST00000491607 TMED8Q6PL24 325 aaPredicted RBP22.34■■□□□ 1.17
SMIM4-205ENST00000491607 SIRT2Q8IXJ6 389 aa22.34■■□□□ 1.17
SMIM4-205ENST00000491607 NKX2-3Q8TAU0 364 aa22.34■■□□□ 1.17
SMIM4-205ENST00000491607 GCC1Q96CN9 775 aa22.34■■□□□ 1.17
SMIM4-205ENST00000491607 SHISA4Q96DD7 197 aa22.34■■□□□ 1.17
SMIM4-205ENST00000491607 DNAJC2Q99543 621 aaKnown RBP22.34■■□□□ 1.17
SMIM4-205ENST00000491607 CHMP4BQ9H444 224 aaKnown RBP22.34■■□□□ 1.17
SMIM4-205ENST00000491607 GINM1Q9NU53 330 aa22.34■■□□□ 1.17
SMIM4-205ENST00000491607 MAGEB6P1A0A0J9YX57 407 aa22.32■■□□□ 1.16
SMIM4-205ENST00000491607 C19orf81C9J6K1 198 aa22.32■■□□□ 1.16
SMIM4-205ENST00000491607 GOLIM4O00461 696 aa22.32■■□□□ 1.16
SMIM4-205ENST00000491607 RAB11FIP3O75154 756 aa22.32■■□□□ 1.16
SMIM4-205ENST00000491607 GJB1P08034 283 aa22.32■■□□□ 1.16
SMIM4-205ENST00000491607 IRF5Q13568 498 aa22.32■■□□□ 1.16
SMIM4-205ENST00000491607 SLC9C2Q5TAH2 1124 aa22.32■■□□□ 1.16
SMIM4-205ENST00000491607 TTC6Q86TZ1 520 aa22.32■■□□□ 1.16
SMIM4-205ENST00000491607 PXYLP1Q8TE99 480 aa22.32■■□□□ 1.16
SMIM4-205ENST00000491607 UNC93B1Q9H1C4 597 aa22.32■■□□□ 1.16
SMIM4-205ENST00000491607 SERPINB13Q9UIV8 391 aa22.32■■□□□ 1.16
SMIM4-205ENST00000491607 GH2P01242 217 aa22.31■■□□□ 1.16
SMIM4-205ENST00000491607 INHAP05111 366 aa22.31■■□□□ 1.16
SMIM4-205ENST00000491607 GJA8P48165 433 aa22.31■■□□□ 1.16
SMIM4-205ENST00000491607 RIOK1Q9BRS2 568 aaKnown RBP22.31■■□□□ 1.16
SMIM4-205ENST00000491607 PDE6AP16499 860 aa22.3■■□□□ 1.16
SMIM4-205ENST00000491607 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.3■■□□□ 1.16
SMIM4-205ENST00000491607 EHD4Q9H223 541 aa22.3■■□□□ 1.16
SMIM4-205ENST00000491607 HOXA7P31268 230 aaPredicted RBP22.29■■□□□ 1.16
SMIM4-205ENST00000491607 RAB3GAP1Q15042 981 aa22.29■■□□□ 1.16
SMIM4-205ENST00000491607 TATDN1Q6P1N9 297 aa22.29■■□□□ 1.16
SMIM4-205ENST00000491607 U2AF1L4Q8WU68 220 aaKnown RBP22.29■■□□□ 1.16
SMIM4-205ENST00000491607 P2RX7Q99572 595 aaKnown RBP22.29■■□□□ 1.16
SMIM4-205ENST00000491607 FEZ1Q99689 392 aa22.29■■□□□ 1.16
SMIM4-205ENST00000491607 CRNKL1Q9BZJ0 848 aaKnown RBP22.29■■□□□ 1.16
SMIM4-205ENST00000491607 ZNF532Q9HCE3 1301 aa22.29■■□□□ 1.16
SMIM4-205ENST00000491607 MYH1P12882 1939 aa22.28■■□□□ 1.16
SMIM4-205ENST00000491607 POLR3DP05423 398 aaPredicted RBP22.28■■□□□ 1.16
SMIM4-205ENST00000491607 HERVK_113P62684 666 aa22.28■■□□□ 1.16
SMIM4-205ENST00000491607 ZYXQ15942 572 aaKnown RBP22.28■■□□□ 1.16
SMIM4-205ENST00000491607 CERKLQ49MI3 558 aaPredicted RBP22.28■■□□□ 1.16
SMIM4-205ENST00000491607 C20orf194Q5TEA3 1177 aa22.28■■□□□ 1.16
SMIM4-205ENST00000491607 USP17L2Q6R6M4 530 aa22.28■■□□□ 1.16
SMIM4-205ENST00000491607 EDC3Q96F86 508 aaKnown RBP22.28■■□□□ 1.16
SMIM4-205ENST00000491607 MORF4L1Q9UBU8 362 aa22.28■■□□□ 1.16
SMIM4-205ENST00000491607 PEX10O60683 326 aa22.27■■□□□ 1.16
SMIM4-205ENST00000491607 PLCD1P51178 756 aa22.27■■□□□ 1.16
SMIM4-205ENST00000491607 ABCB5Q2M3G0 1257 aa22.27■■□□□ 1.16
SMIM4-205ENST00000491607 BOLA2Q9H3K6 86 aa22.27■■□□□ 1.16
SMIM4-205ENST00000491607 EMILIN3Q9NT22 766 aa22.27■■□□□ 1.16
SMIM4-205ENST00000491607 GPRC5AQ8NFJ5 357 aa22.26■■□□□ 1.15
SMIM4-205ENST00000491607 DPF3Q92784 378 aa22.26■■□□□ 1.15
SMIM4-205ENST00000491607 DEFB118Q96PH6 123 aa22.26■■□□□ 1.15
SMIM4-205ENST00000491607 CABP5Q9NP86 173 aa22.26■■□□□ 1.15
SMIM4-205ENST00000491607 PAG1Q9NWQ8 432 aa22.26■■□□□ 1.15
SMIM4-205ENST00000491607 MCM9Q9NXL9 1143 aa22.26■■□□□ 1.15
SMIM4-205ENST00000491607 SGPL1O95470 568 aa22.25■■□□□ 1.15
SMIM4-205ENST00000491607 PDE3AQ14432 1141 aa22.25■■□□□ 1.15
SMIM4-205ENST00000491607 LCORLQ8N3X6 602 aa22.25■■□□□ 1.15
SMIM4-205ENST00000491607 SDR42E1Q8WUS8 393 aa22.25■■□□□ 1.15
SMIM4-205ENST00000491607 PAGR1Q9BTK6 254 aa22.25■■□□□ 1.15
SMIM4-205ENST00000491607 TXNRD2Q9NNW7 524 aa22.25■■□□□ 1.15
SMIM4-205ENST00000491607 TCRBV5S4A2TA0A5A2 114 aa22.24■■□□□ 1.15
SMIM4-205ENST00000491607 TFRCP02786 760 aaKnown RBP22.24■■□□□ 1.15
SMIM4-205ENST00000491607 SHMT1P34896 483 aa22.24■■□□□ 1.15
SMIM4-205ENST00000491607 HABP4Q5JVS0 413 aaKnown RBP22.24■■□□□ 1.15
SMIM4-205ENST00000491607 CCAR1Q8IX12 1150 aaKnown RBP22.24■■□□□ 1.15
SMIM4-205ENST00000491607 ARMT1Q9H993 441 aa22.24■■□□□ 1.15
SMIM4-205ENST00000491607 GJD2Q9UKL4 321 aa22.24■■□□□ 1.15
SMIM4-205ENST00000491607 NAV1Q8NEY1 1877 aa22.24■■□□□ 1.15
SMIM4-205ENST00000491607 DDX60LQ5H9U9 1706 aaKnown RBP22.23■■□□□ 1.15
SMIM4-205ENST00000491607 H0YGN5 161 aa22.23■■□□□ 1.15
SMIM4-205ENST00000491607 MPHOSPH10O00566 681 aaKnown RBP22.23■■□□□ 1.15
SMIM4-205ENST00000491607 FARP2O94887 1054 aaPredicted RBP22.23■■□□□ 1.15
SMIM4-205ENST00000491607 HMGCRP04035 888 aa22.23■■□□□ 1.15
SMIM4-205ENST00000491607 ATP5JP18859 108 aa22.23■■□□□ 1.15
SMIM4-205ENST00000491607 HTATIP2Q9BUP3 242 aa22.23■■□□□ 1.15
SMIM4-205ENST00000491607 LRRCC1Q9C099 1032 aa22.23■■□□□ 1.15
SMIM4-205ENST00000491607 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.23■■□□□ 1.15
SMIM4-205ENST00000491607 RBPJLQ9UBG7 517 aa22.23■■□□□ 1.15
SMIM4-205ENST00000491607 USP14P54578 494 aa22.22■■□□□ 1.15
SMIM4-205ENST00000491607 ERVK-9P63128 1117 aa22.22■■□□□ 1.15
SMIM4-205ENST00000491607 ERVK-24P63145 666 aa22.22■■□□□ 1.15
SMIM4-205ENST00000491607 EVX2Q03828 476 aa22.22■■□□□ 1.15
SMIM4-205ENST00000491607 UBE2Q1Q7Z7E8 422 aa22.22■■□□□ 1.15
SMIM4-205ENST00000491607 ACER1Q8TDN7 264 aa22.22■■□□□ 1.15
SMIM4-205ENST00000491607 GTF3C2Q8WUA4 911 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms