RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 WDR18Q9BV38 432 aa19.15■□□□□ 0.66
SMPD4-220ENST00000491319 ZBTB21Q9ULJ3 1066 aa19.15■□□□□ 0.66
SMPD4-220ENST00000491319 COG6Q9Y2V7 657 aa19.15■□□□□ 0.66
SMPD4-220ENST00000491319 ALPK3Q96L96 1907 aa19.15■□□□□ 0.66
SMPD4-220ENST00000491319 APBB1O00213 710 aa19.14■□□□□ 0.65
SMPD4-220ENST00000491319 GJB1P08034 283 aa19.14■□□□□ 0.65
SMPD4-220ENST00000491319 MS4A1P11836 297 aa19.14■□□□□ 0.65
SMPD4-220ENST00000491319 USP5P45974 858 aa19.14■□□□□ 0.65
SMPD4-220ENST00000491319 GJA8P48165 433 aa19.14■□□□□ 0.65
SMPD4-220ENST00000491319 GCLCP48506 637 aaPredicted RBP19.14■□□□□ 0.65
SMPD4-220ENST00000491319 BACE1P56817 501 aa19.14■□□□□ 0.65
SMPD4-220ENST00000491319 MAP3K12Q12852 859 aa19.14■□□□□ 0.65
SMPD4-220ENST00000491319 HSP90AB4PQ58FF6 505 aa19.14■□□□□ 0.65
SMPD4-220ENST00000491319 UNC93B1Q9H1C4 597 aa19.14■□□□□ 0.65
SMPD4-220ENST00000491319 TAOK2Q9UL54 1235 aa19.14■□□□□ 0.65
SMPD4-220ENST00000491319 INHAP05111 366 aa19.13■□□□□ 0.65
SMPD4-220ENST00000491319 IRF5Q13568 498 aa19.13■□□□□ 0.65
SMPD4-220ENST00000491319 SIRT2Q8IXJ6 389 aa19.13■□□□□ 0.65
SMPD4-220ENST00000491319 NKX2-3Q8TAU0 364 aa19.13■□□□□ 0.65
SMPD4-220ENST00000491319 COA7Q96BR5 231 aa19.13■□□□□ 0.65
SMPD4-220ENST00000491319 DDX19BQ9UMR2 479 aa19.13■□□□□ 0.65
SMPD4-220ENST00000491319 CERS3Q8IU89 383 aa19.12■□□□□ 0.65
SMPD4-220ENST00000491319 PXYLP1Q8TE99 480 aa19.12■□□□□ 0.65
SMPD4-220ENST00000491319 GINM1Q9NU53 330 aa19.12■□□□□ 0.65
SMPD4-220ENST00000491319 ZBTB40Q9NUA8 1239 aa19.12■□□□□ 0.65
SMPD4-220ENST00000491319 TMOD4Q9NZQ9 345 aa19.12■□□□□ 0.65
SMPD4-220ENST00000491319 USP17L10C9JJH3 530 aa19.11■□□□□ 0.65
SMPD4-220ENST00000491319 IRX3P78415 501 aaPredicted RBP19.11■□□□□ 0.65
SMPD4-220ENST00000491319 HABP4Q5JVS0 413 aaKnown RBP19.11■□□□□ 0.65
SMPD4-220ENST00000491319 RPAP2Q8IXW5 612 aaPredicted RBP19.11■□□□□ 0.65
SMPD4-220ENST00000491319 U2AF1L4Q8WU68 220 aaKnown RBP19.11■□□□□ 0.65
SMPD4-220ENST00000491319 KIF1BPQ96EK5 621 aa19.11■□□□□ 0.65
SMPD4-220ENST00000491319 RIOK1Q9BRS2 568 aaKnown RBP19.11■□□□□ 0.65
SMPD4-220ENST00000491319 BCL11AQ9H165 835 aa19.11■□□□□ 0.65
SMPD4-220ENST00000491319 C19orf81C9J6K1 198 aa19.1■□□□□ 0.65
SMPD4-220ENST00000491319 PEX10O60683 326 aa19.1■□□□□ 0.65
SMPD4-220ENST00000491319 HMMRO75330 724 aa19.1■□□□□ 0.65
SMPD4-220ENST00000491319 GH2P01242 217 aa19.1■□□□□ 0.65
SMPD4-220ENST00000491319 UBE2Q1Q7Z7E8 422 aa19.1■□□□□ 0.65
SMPD4-220ENST00000491319 CLASRPQ8N2M8 674 aaKnown RBP19.1■□□□□ 0.65
SMPD4-220ENST00000491319 DNAJC2Q99543 621 aaKnown RBP19.1■□□□□ 0.65
SMPD4-220ENST00000491319 EHD4Q9H223 541 aa19.1■□□□□ 0.65
SMPD4-220ENST00000491319 SERPINB13Q9UIV8 391 aa19.1■□□□□ 0.65
SMPD4-220ENST00000491319 PDE6AP16499 860 aa19.09■□□□□ 0.65
SMPD4-220ENST00000491319 HOXA7P31268 230 aaPredicted RBP19.09■□□□□ 0.65
SMPD4-220ENST00000491319 TTF1Q15361 905 aaPredicted RBP19.09■□□□□ 0.65
SMPD4-220ENST00000491319 TATDN1Q6P1N9 297 aa19.09■□□□□ 0.65
SMPD4-220ENST00000491319 TMED8Q6PL24 325 aaPredicted RBP19.09■□□□□ 0.65
SMPD4-220ENST00000491319 P2RX7Q99572 595 aaKnown RBP19.09■□□□□ 0.65
SMPD4-220ENST00000491319 MORF4L1Q9UBU8 362 aa19.09■□□□□ 0.65
SMPD4-220ENST00000491319 RCAN3Q9UKA8 241 aa19.09■□□□□ 0.65
SMPD4-220ENST00000491319 TRIOBPQ9H2D6 2365 aa19.08■□□□□ 0.65
SMPD4-220ENST00000491319 MAGEB6P1A0A0J9YX57 407 aa19.08■□□□□ 0.64
SMPD4-220ENST00000491319 H0YGN5 161 aa19.08■□□□□ 0.64
SMPD4-220ENST00000491319 GOLIM4O00461 696 aa19.08■□□□□ 0.64
SMPD4-220ENST00000491319 IFIT2P09913 472 aaKnown RBP19.08■□□□□ 0.64
SMPD4-220ENST00000491319 HERVK_113P62684 666 aa19.08■□□□□ 0.64
SMPD4-220ENST00000491319 SLC9C2Q5TAH2 1124 aa19.08■□□□□ 0.64
SMPD4-220ENST00000491319 EDC3Q96F86 508 aaKnown RBP19.08■□□□□ 0.64
SMPD4-220ENST00000491319 TXNRD2Q9NNW7 524 aa19.08■□□□□ 0.64
SMPD4-220ENST00000491319 EMILIN3Q9NT22 766 aa19.08■□□□□ 0.64
SMPD4-220ENST00000491319 FRMPD3Q5JV73 1810 aa19.08■□□□□ 0.64
SMPD4-220ENST00000491319 FARP2O94887 1054 aaPredicted RBP19.07■□□□□ 0.64
SMPD4-220ENST00000491319 SGPL1O95470 568 aa19.07■□□□□ 0.64
SMPD4-220ENST00000491319 PLCD1P51178 756 aa19.07■□□□□ 0.64
SMPD4-220ENST00000491319 ZYXQ15942 572 aaKnown RBP19.07■□□□□ 0.64
SMPD4-220ENST00000491319 TTC6Q86TZ1 520 aa19.07■□□□□ 0.64
SMPD4-220ENST00000491319 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.07■□□□□ 0.64
SMPD4-220ENST00000491319 DEFB118Q96PH6 123 aa19.07■□□□□ 0.64
SMPD4-220ENST00000491319 PAK6Q9NQU5 681 aaPredicted RBP19.07■□□□□ 0.64
SMPD4-220ENST00000491319 GJD2Q9UKL4 321 aa19.07■□□□□ 0.64
SMPD4-220ENST00000491319 ZNF532Q9HCE3 1301 aa19.06■□□□□ 0.64
SMPD4-220ENST00000491319 SHMT1P34896 483 aa19.06■□□□□ 0.64
SMPD4-220ENST00000491319 EVX2Q03828 476 aa19.06■□□□□ 0.64
SMPD4-220ENST00000491319 RAB3GAP1Q15042 981 aa19.06■□□□□ 0.64
SMPD4-220ENST00000491319 CERKLQ49MI3 558 aaPredicted RBP19.06■□□□□ 0.64
SMPD4-220ENST00000491319 USP17L2Q6R6M4 530 aa19.06■□□□□ 0.64
SMPD4-220ENST00000491319 DPF3Q92784 378 aa19.06■□□□□ 0.64
SMPD4-220ENST00000491319 FEZ1Q99689 392 aa19.06■□□□□ 0.64
SMPD4-220ENST00000491319 PARP14Q460N5 1801 aa19.06■□□□□ 0.64
SMPD4-220ENST00000491319 RLFQ13129 1914 aa19.06■□□□□ 0.64
SMPD4-220ENST00000491319 TCRBV5S4A2TA0A5A2 114 aa19.05■□□□□ 0.64
SMPD4-220ENST00000491319 RAB11FIP3O75154 756 aa19.05■□□□□ 0.64
SMPD4-220ENST00000491319 HMGCRP04035 888 aa19.05■□□□□ 0.64
SMPD4-220ENST00000491319 ABCB5Q2M3G0 1257 aa19.05■□□□□ 0.64
SMPD4-220ENST00000491319 C20orf194Q5TEA3 1177 aa19.05■□□□□ 0.64
SMPD4-220ENST00000491319 POTEEQ6S8J3 1075 aa19.05■□□□□ 0.64
SMPD4-220ENST00000491319 LCORLQ8N3X6 602 aa19.05■□□□□ 0.64
SMPD4-220ENST00000491319 SDR42E1Q8WUS8 393 aa19.05■□□□□ 0.64
SMPD4-220ENST00000491319 PAGR1Q9BTK6 254 aa19.05■□□□□ 0.64
SMPD4-220ENST00000491319 CRNKL1Q9BZJ0 848 aaKnown RBP19.05■□□□□ 0.64
SMPD4-220ENST00000491319 COLQQ9Y215 455 aaPredicted RBP19.05■□□□□ 0.64
SMPD4-220ENST00000491319 A0A0G2JMZ2 1700 aa19.04■□□□□ 0.64
SMPD4-220ENST00000491319 POLR3DP05423 398 aaPredicted RBP19.04■□□□□ 0.64
SMPD4-220ENST00000491319 TRIM32Q13049 653 aa19.04■□□□□ 0.64
SMPD4-220ENST00000491319 GPRC5AQ8NFJ5 357 aa19.04■□□□□ 0.64
SMPD4-220ENST00000491319 C12orf42Q96LP6 360 aa19.04■□□□□ 0.64
SMPD4-220ENST00000491319 HTATIP2Q9BUP3 242 aa19.04■□□□□ 0.64
SMPD4-220ENST00000491319 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.04■□□□□ 0.64
SMPD4-220ENST00000491319 RBPJLQ9UBG7 517 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms