RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 SLBPQ14493 270 aaKnown RBP eCLIP7.96□□□□□ -1.14
PHC3-213ENST00000491258 ZSCAN29Q8IWY8 852 aaPredicted RBP7.96□□□□□ -1.14
PHC3-213ENST00000491258 SPG7Q9UQ90 795 aa7.96□□□□□ -1.14
PHC3-213ENST00000491258 TSPAN15O95858 294 aa7.95□□□□□ -1.14
PHC3-213ENST00000491258 USP17L7P0C7H9 530 aa7.95□□□□□ -1.14
PHC3-213ENST00000491258 ZNF865P0CJ78 1059 aaPredicted RBP7.95□□□□□ -1.14
PHC3-213ENST00000491258 GDNFP39905 211 aa7.95□□□□□ -1.14
PHC3-213ENST00000491258 FMR1Q06787 632 aaKnown RBP eCLIP7.95□□□□□ -1.14
PHC3-213ENST00000491258 NKG7Q16617 165 aa7.95□□□□□ -1.14
PHC3-213ENST00000491258 KRTAP19-4Q3LI73 84 aa7.95□□□□□ -1.14
PHC3-213ENST00000491258 WIPI1Q5MNZ9 446 aaPredicted RBP7.95□□□□□ -1.14
PHC3-213ENST00000491258 C22orf34Q6ZV56 151 aa7.95□□□□□ -1.14
PHC3-213ENST00000491258 MFSD2AQ8NA29 543 aa7.95□□□□□ -1.14
PHC3-213ENST00000491258 ANKRD24Q8TF21 1146 aa7.95□□□□□ -1.14
PHC3-213ENST00000491258 WNT10AQ9GZT5 417 aa7.95□□□□□ -1.14
PHC3-213ENST00000491258 C19orf73Q9NVV2 129 aa7.95□□□□□ -1.14
PHC3-213ENST00000491258 CFPP27918 469 aa7.94□□□□□ -1.14
PHC3-213ENST00000491258 LETMD1Q6P1Q0 360 aa7.94□□□□□ -1.14
PHC3-213ENST00000491258 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.94□□□□□ -1.14
PHC3-213ENST00000491258 CILP2Q8IUL8 1156 aa7.94□□□□□ -1.14
PHC3-213ENST00000491258 LRRC56Q8IYG6 542 aaPredicted RBP7.94□□□□□ -1.14
PHC3-213ENST00000491258 RIN3Q8TB24 985 aa7.94□□□□□ -1.14
PHC3-213ENST00000491258 ZSCAN18Q8TBC5 510 aaPredicted RBP7.94□□□□□ -1.14
PHC3-213ENST00000491258 XAGE3Q8WTP9 111 aa7.94□□□□□ -1.14
PHC3-213ENST00000491258 C12orf49Q9H741 205 aa7.94□□□□□ -1.14
PHC3-213ENST00000491258 TTF2Q9UNY4 1162 aaKnown RBP7.94□□□□□ -1.14
PHC3-213ENST00000491258 CAPN6Q9Y6Q1 641 aa7.94□□□□□ -1.14
PHC3-213ENST00000491258 BRD1O95696 1058 aa7.93□□□□□ -1.14
PHC3-213ENST00000491258 CDK8P49336 464 aa7.93□□□□□ -1.14
PHC3-213ENST00000491258 ANKLE2Q86XL3 938 aa7.93□□□□□ -1.14
PHC3-213ENST00000491258 HID1Q8IV36 788 aa7.93□□□□□ -1.14
PHC3-213ENST00000491258 UBE2FQ969M7 185 aa7.93□□□□□ -1.14
PHC3-213ENST00000491258 GAL3ST3Q96A11 431 aa7.93□□□□□ -1.14
PHC3-213ENST00000491258 DIRC2Q96SL1 478 aa7.93□□□□□ -1.14
PHC3-213ENST00000491258 NSUN3Q9H649 340 aaKnown RBP7.93□□□□□ -1.14
PHC3-213ENST00000491258 SLAMF8Q9P0V8 285 aa7.93□□□□□ -1.14
PHC3-213ENST00000491258 ZSWIM5Q9P217 1185 aa7.93□□□□□ -1.14
PHC3-213ENST00000491258 FAM8A1Q9UBU6 413 aa7.93□□□□□ -1.14
PHC3-213ENST00000491258 ST14Q9Y5Y6 855 aa7.93□□□□□ -1.14
PHC3-213ENST00000491258 SUPT5HO00267 1087 aaKnown RBP7.92□□□□□ -1.14
PHC3-213ENST00000491258 PRAMEF13Q5VWM6 474 aa7.92□□□□□ -1.14
PHC3-213ENST00000491258 ZNF746Q6NUN9 644 aaPredicted RBP7.92□□□□□ -1.14
PHC3-213ENST00000491258 CCDC120Q96HB5 630 aa7.92□□□□□ -1.14
PHC3-213ENST00000491258 SNCAIPQ9Y6H5 919 aa7.92□□□□□ -1.14
PHC3-213ENST00000491258 RBAK-RBAKDNI3L0D1 243 aa7.91□□□□□ -1.14
PHC3-213ENST00000491258 NFIBO00712 420 aa7.91□□□□□ -1.14
PHC3-213ENST00000491258 C1QTNF9P0C862 333 aa7.91□□□□□ -1.14
PHC3-213ENST00000491258 GRK4P32298 578 aa7.91□□□□□ -1.14
PHC3-213ENST00000491258 CAP2P40123 477 aa7.91□□□□□ -1.14
PHC3-213ENST00000491258 TTBK2Q6IQ55 1244 aa7.91□□□□□ -1.14
PHC3-213ENST00000491258 SV2BQ7L1I2 683 aa7.91□□□□□ -1.14
PHC3-213ENST00000491258 THAP5Q7Z6K1 395 aa7.91□□□□□ -1.14
PHC3-213ENST00000491258 FBXO15Q8NCQ5 510 aaPredicted RBP7.91□□□□□ -1.14
PHC3-213ENST00000491258 ALPK1Q96QP1 1244 aa7.91□□□□□ -1.14
PHC3-213ENST00000491258 CST3P01034 146 aaPredicted RBP7.9□□□□□ -1.14
PHC3-213ENST00000491258 LMNB1P20700 586 aa7.9□□□□□ -1.14
PHC3-213ENST00000491258 CYP7A1P22680 504 aa7.9□□□□□ -1.14
PHC3-213ENST00000491258 LCE5AQ5TCM9 118 aa7.9□□□□□ -1.14
PHC3-213ENST00000491258 C1QL4Q86Z23 238 aa7.9□□□□□ -1.14
PHC3-213ENST00000491258 ASB16Q96NS5 453 aa7.9□□□□□ -1.14
PHC3-213ENST00000491258 RAC2P15153 192 aa7.89□□□□□ -1.15
PHC3-213ENST00000491258 LCNL1Q6ZST4 164 aa7.89□□□□□ -1.15
PHC3-213ENST00000491258 TTC6Q86TZ1 520 aa7.89□□□□□ -1.15
PHC3-213ENST00000491258 CDH24Q86UP0 819 aa7.89□□□□□ -1.15
PHC3-213ENST00000491258 KIR3DL1P43629 444 aa7.88□□□□□ -1.15
PHC3-213ENST00000491258 TNK2Q07912 1038 aa7.88□□□□□ -1.15
PHC3-213ENST00000491258 SEPT6Q14141 434 aa7.88□□□□□ -1.15
PHC3-213ENST00000491258 ABHD4Q8TB40 342 aa7.88□□□□□ -1.15
PHC3-213ENST00000491258 KRTAP17-1Q9BYP8 105 aa7.88□□□□□ -1.15
PHC3-213ENST00000491258 KCNK12Q9HB15 430 aa7.88□□□□□ -1.15
PHC3-213ENST00000491258 DNAJC25-GNG10A0A024R161 153 aa7.87□□□□□ -1.15
PHC3-213ENST00000491258 ZSCAN22P10073 491 aaPredicted RBP7.87□□□□□ -1.15
PHC3-213ENST00000491258 COX4I2Q96KJ9 171 aa7.87□□□□□ -1.15
PHC3-213ENST00000491258 DPH2Q9BQC3 489 aaPredicted RBP7.87□□□□□ -1.15
PHC3-213ENST00000491258 EPB41L4BQ9H329 900 aa7.87□□□□□ -1.15
PHC3-213ENST00000491258 DCP1AQ9NPI6 582 aaPredicted RBP7.87□□□□□ -1.15
PHC3-213ENST00000491258 PCDHB5Q9Y5E4 795 aa7.87□□□□□ -1.15
PHC3-213ENST00000491258 KRT1P04264 644 aa7.86□□□□□ -1.15
PHC3-213ENST00000491258 TMEM253P0C7T8 217 aa7.86□□□□□ -1.15
PHC3-213ENST00000491258 HK2P52789 917 aa7.86□□□□□ -1.15
PHC3-213ENST00000491258 CCDC85BQ15834 202 aaPredicted RBP7.86□□□□□ -1.15
PHC3-213ENST00000491258 RALGPS1Q5JS13 557 aa7.86□□□□□ -1.15
PHC3-213ENST00000491258 NPIPB6E9PJ23 425 aa7.85□□□□□ -1.15
PHC3-213ENST00000491258 PGRP06401 933 aa7.85□□□□□ -1.15
PHC3-213ENST00000491258 LDHBP07195 334 aaKnown RBP7.85□□□□□ -1.15
PHC3-213ENST00000491258 P4HBP07237 508 aaKnown RBP7.85□□□□□ -1.15
PHC3-213ENST00000491258 ERVFC1P60507 584 aa7.85□□□□□ -1.15
PHC3-213ENST00000491258 CREG2Q8IUH2 290 aa7.85□□□□□ -1.15
PHC3-213ENST00000491258 IVNS1ABPQ9Y6Y0 642 aa7.85□□□□□ -1.15
PHC3-213ENST00000491258 ESR1P03372 595 aa7.84□□□□□ -1.15
PHC3-213ENST00000491258 EIF4BP23588 611 aaKnown RBP7.84□□□□□ -1.15
PHC3-213ENST00000491258 RPS26P62854 115 aaKnown RBP7.84□□□□□ -1.15
PHC3-213ENST00000491258 MAP3K11Q16584 847 aa7.84□□□□□ -1.15
PHC3-213ENST00000491258 TMPRSS7Q7RTY8 843 aa7.84□□□□□ -1.15
PHC3-213ENST00000491258 SIAH1Q8IUQ4 282 aa7.84□□□□□ -1.15
PHC3-213ENST00000491258 MYLIPQ8WY64 445 aa7.84□□□□□ -1.15
PHC3-213ENST00000491258 FRMD6Q96NE9 622 aa7.84□□□□□ -1.15
PHC3-213ENST00000491258 TJP2Q9UDY2 1190 aa7.84□□□□□ -1.15
PHC3-213ENST00000491258 TMEM59LQ9UK28 342 aa7.84□□□□□ -1.15
PHC3-213ENST00000491258 WASH4PA8MWX3 477 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms