RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 MPHOSPH10O00566 681 aaKnown RBP12.76□□□□□ -0.37
CACNA1C-227ENST00000491104 MAP3K9P80192 1104 aa12.76□□□□□ -0.37
CACNA1C-227ENST00000491104 PDE4BQ07343 736 aa12.76□□□□□ -0.37
CACNA1C-227ENST00000491104 COL9A3Q14050 684 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-227ENST00000491104 VGLL4Q14135 290 aa12.76□□□□□ -0.37
CACNA1C-227ENST00000491104 CERKLQ49MI3 558 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-227ENST00000491104 MFSD6Q6ZSS7 791 aa12.76□□□□□ -0.37
CACNA1C-227ENST00000491104 ELP3Q9H9T3 547 aa12.76□□□□□ -0.37
CACNA1C-227ENST00000491104 SNCAIPQ9Y6H5 919 aa12.76□□□□□ -0.37
CACNA1C-227ENST00000491104 TMEM88BA6NKF7 163 aa12.75□□□□□ -0.37
CACNA1C-227ENST00000491104 ORC4O43929 436 aa12.75□□□□□ -0.37
CACNA1C-227ENST00000491104 RANBP6O60518 1105 aaKnown RBP12.75□□□□□ -0.37
CACNA1C-227ENST00000491104 GH2P01242 217 aa12.75□□□□□ -0.37
CACNA1C-227ENST00000491104 FGRP09769 529 aa12.75□□□□□ -0.37
CACNA1C-227ENST00000491104 CAP2P40123 477 aa12.75□□□□□ -0.37
CACNA1C-227ENST00000491104 APLP1P51693 650 aa12.75□□□□□ -0.37
CACNA1C-227ENST00000491104 HUNKP57058 714 aa12.75□□□□□ -0.37
CACNA1C-227ENST00000491104 HTRA3P83110 453 aa12.75□□□□□ -0.37
CACNA1C-227ENST00000491104 ABCB5Q2M3G0 1257 aa12.75□□□□□ -0.37
CACNA1C-227ENST00000491104 ADCK5Q3MIX3 580 aa12.75□□□□□ -0.37
CACNA1C-227ENST00000491104 LDLRAD1Q5T700 205 aa12.75□□□□□ -0.37
CACNA1C-227ENST00000491104 RNF20Q5VTR2 975 aa12.75□□□□□ -0.37
CACNA1C-227ENST00000491104 SCYL3Q8IZE3 742 aa12.75□□□□□ -0.37
CACNA1C-227ENST00000491104 CNKSR2Q8WXI2 1034 aa12.75□□□□□ -0.37
CACNA1C-227ENST00000491104 ZBTB21Q9ULJ3 1066 aa12.75□□□□□ -0.37
CACNA1C-227ENST00000491104 ABT1Q9ULW3 272 aaKnown RBP12.75□□□□□ -0.37
CACNA1C-227ENST00000491104 SNX14Q9Y5W7 946 aa12.75□□□□□ -0.37
CACNA1C-227ENST00000491104 MYH4Q9Y623 1939 aa12.74□□□□□ -0.37
CACNA1C-227ENST00000491104 CTNND1O60716 968 aaKnown RBP12.74□□□□□ -0.37
CACNA1C-227ENST00000491104 MCCP23508 829 aa12.74□□□□□ -0.37
CACNA1C-227ENST00000491104 GUCY1A2P33402 732 aa12.74□□□□□ -0.37
CACNA1C-227ENST00000491104 FKBP1BP68106 108 aa12.74□□□□□ -0.37
CACNA1C-227ENST00000491104 TFAP4Q01664 338 aa12.74□□□□□ -0.37
CACNA1C-227ENST00000491104 SEPT2Q15019 361 aa12.74□□□□□ -0.37
CACNA1C-227ENST00000491104 NOL9Q5SY16 702 aaKnown RBP12.74□□□□□ -0.37
CACNA1C-227ENST00000491104 ANKRD13AQ8IZ07 590 aa12.74□□□□□ -0.37
CACNA1C-227ENST00000491104 ZNF444Q8N0Y2 327 aaPredicted RBP12.74□□□□□ -0.37
CACNA1C-227ENST00000491104 KCNB2Q92953 911 aa12.74□□□□□ -0.37
CACNA1C-227ENST00000491104 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.74□□□□□ -0.37
CACNA1C-227ENST00000491104 RNF41Q9H4P4 317 aaPredicted RBP12.74□□□□□ -0.37
CACNA1C-227ENST00000491104 CSADQ9Y600 493 aa12.74□□□□□ -0.37
CACNA1C-227ENST00000491104 TLL2Q9Y6L7 1015 aa12.74□□□□□ -0.37
CACNA1C-227ENST00000491104 TSPY2A6NKD2 308 aa12.73□□□□□ -0.37
CACNA1C-227ENST00000491104 EPB41L2O43491 1005 aaKnown RBP12.73□□□□□ -0.37
CACNA1C-227ENST00000491104 NMT2O60551 498 aa12.73□□□□□ -0.37
CACNA1C-227ENST00000491104 KDM4AO75164 1064 aa12.73□□□□□ -0.37
CACNA1C-227ENST00000491104 TSPY3P0CV98 308 aa12.73□□□□□ -0.37
CACNA1C-227ENST00000491104 TSPY8P0CW00 308 aa12.73□□□□□ -0.37
CACNA1C-227ENST00000491104 CPA1P15085 419 aa12.73□□□□□ -0.37
CACNA1C-227ENST00000491104 C1QTNF8P60827 252 aa12.73□□□□□ -0.37
CACNA1C-227ENST00000491104 MKRN3Q13064 507 aaKnown RBP12.73□□□□□ -0.37
CACNA1C-227ENST00000491104 RAB3GAP1Q15042 981 aa12.73□□□□□ -0.37
CACNA1C-227ENST00000491104 CYB5R4Q7L1T6 521 aa12.73□□□□□ -0.37
CACNA1C-227ENST00000491104 CHST3Q7LGC8 479 aa12.73□□□□□ -0.37
CACNA1C-227ENST00000491104 SAPCD2Q86UD0 394 aa12.73□□□□□ -0.37
CACNA1C-227ENST00000491104 NCOA7Q8NI08 942 aa12.73□□□□□ -0.37
CACNA1C-227ENST00000491104 ZKSCAN3Q9BRR0 538 aa12.73□□□□□ -0.37
CACNA1C-227ENST00000491104 ZNF287Q9HBT7 754 aa12.73□□□□□ -0.37
CACNA1C-227ENST00000491104 CABP5Q9NP86 173 aa12.73□□□□□ -0.37
CACNA1C-227ENST00000491104 PTPRFP10586 1907 aa12.72□□□□□ -0.37
CACNA1C-227ENST00000491104 PLIN4Q96Q06 1357 aa12.72□□□□□ -0.37
CACNA1C-227ENST00000491104 CEP350Q5VT06 3117 aa12.72□□□□□ -0.37
CACNA1C-227ENST00000491104 EIF5BO60841 1220 aaKnown RBP12.72□□□□□ -0.37
CACNA1C-227ENST00000491104 PCP11498 1178 aaKnown RBP12.72□□□□□ -0.37
CACNA1C-227ENST00000491104 ZKSCAN1P17029 563 aaPredicted RBP12.72□□□□□ -0.37
CACNA1C-227ENST00000491104 PTPRAP18433 802 aa12.72□□□□□ -0.37
CACNA1C-227ENST00000491104 GJA5P36382 358 aa12.72□□□□□ -0.37
CACNA1C-227ENST00000491104 ANTXR2P58335 489 aa12.72□□□□□ -0.37
CACNA1C-227ENST00000491104 TMEM179Q6ZVK1 233 aa12.72□□□□□ -0.37
CACNA1C-227ENST00000491104 PAXIP1Q6ZW49 1069 aaPredicted RBP12.72□□□□□ -0.37
CACNA1C-227ENST00000491104 RALYLQ86SE5 291 aaKnown RBP12.72□□□□□ -0.37
CACNA1C-227ENST00000491104 MB21D2Q8IYB1 491 aaPredicted RBP12.72□□□□□ -0.37
CACNA1C-227ENST00000491104 NEDD1Q8NHV4 660 aa12.72□□□□□ -0.37
CACNA1C-227ENST00000491104 CCDC17Q96LX7 622 aa12.72□□□□□ -0.37
CACNA1C-227ENST00000491104 TCEANC2Q96MN5 208 aa12.72□□□□□ -0.37
CACNA1C-227ENST00000491104 JAKMIP1Q96N16 626 aaKnown RBP12.72□□□□□ -0.37
CACNA1C-227ENST00000491104 C22orf23Q9BZE7 217 aa12.72□□□□□ -0.37
CACNA1C-227ENST00000491104 KRT23Q9C075 422 aa12.72□□□□□ -0.37
CACNA1C-227ENST00000491104 PICK1Q9NRD5 415 aa12.72□□□□□ -0.37
CACNA1C-227ENST00000491104 TAOK2Q9UL54 1235 aa12.72□□□□□ -0.37
CACNA1C-227ENST00000491104 IGKV6D-41A0A0C4DH26 115 aa12.71□□□□□ -0.37
CACNA1C-227ENST00000491104 ASNSP08243 561 aa12.71□□□□□ -0.37
CACNA1C-227ENST00000491104 ATP2B2Q01814 1243 aa12.71□□□□□ -0.37
CACNA1C-227ENST00000491104 TRDNQ13061 729 aa12.71□□□□□ -0.37
CACNA1C-227ENST00000491104 GRM1Q13255 1194 aa12.71□□□□□ -0.37
CACNA1C-227ENST00000491104 TSGA10IPQ3SY00 556 aa12.71□□□□□ -0.37
CACNA1C-227ENST00000491104 RGMBQ6NW40 437 aa12.71□□□□□ -0.37
CACNA1C-227ENST00000491104 RASAL3Q86YV0 1011 aa12.71□□□□□ -0.37
CACNA1C-227ENST00000491104 ESR2Q92731 530 aa12.71□□□□□ -0.37
CACNA1C-227ENST00000491104 OPTNQ96CV9 577 aa12.71□□□□□ -0.37
CACNA1C-227ENST00000491104 SLC10A4Q96EP9 437 aa12.71□□□□□ -0.37
CACNA1C-227ENST00000491104 OTUD5Q96G74 571 aa12.71□□□□□ -0.37
CACNA1C-227ENST00000491104 WNK4Q96J92 1243 aa12.71□□□□□ -0.37
CACNA1C-227ENST00000491104 NEK1Q96PY6 1258 aa12.71□□□□□ -0.37
CACNA1C-227ENST00000491104 LRRC2Q9BYS8 371 aa12.71□□□□□ -0.37
CACNA1C-227ENST00000491104 CNNM2Q9H8M5 875 aa12.71□□□□□ -0.37
CACNA1C-227ENST00000491104 IL17RBQ9NRM6 502 aa12.71□□□□□ -0.37
CACNA1C-227ENST00000491104 CREBZFQ9NS37 354 aa12.71□□□□□ -0.37
CACNA1C-227ENST00000491104 ZSWIM5Q9P217 1185 aa12.71□□□□□ -0.37
CACNA1C-227ENST00000491104 SPDYE5A6NIY4 337 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms