RNA–Protein interactions for RNA: ENST00000490812.5

PTPN18-215, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 5

Gene PTPN18, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-215ENST00000490812 HMGCS2P54868 508 aa25.79■■□□□ 1.72
PTPN18-215ENST00000490812 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.79■■□□□ 1.728e-7■■■■■ 37.5
PTPN18-215ENST00000490812 ZBTB21Q9ULJ3 1066 aa25.79■■□□□ 1.72
PTPN18-215ENST00000490812 MYH7P12883 1935 aa25.78■■□□□ 1.72
PTPN18-215ENST00000490812 FCGRTP55899 365 aa25.78■■□□□ 1.72
PTPN18-215ENST00000490812 BACE1P56817 501 aa25.78■■□□□ 1.72
PTPN18-215ENST00000490812 SLC4A8Q2Y0W8 1093 aa25.78■■□□□ 1.72
PTPN18-215ENST00000490812 TATDN1Q6P1N9 297 aa25.78■■□□□ 1.72
PTPN18-215ENST00000490812 EDC3Q96F86 508 aaKnown RBP25.78■■□□□ 1.72
PTPN18-215ENST00000490812 GDF11O95390 407 aa25.77■■□□□ 1.72
PTPN18-215ENST00000490812 OSBPP22059 807 aa25.77■■□□□ 1.72
PTPN18-215ENST00000490812 JAG1P78504 1218 aa25.77■■□□□ 1.72
PTPN18-215ENST00000490812 C19orf81C9J6K1 198 aa25.76■■□□□ 1.71
PTPN18-215ENST00000490812 SMARCA5O60264 1052 aaPredicted RBP25.76■■□□□ 1.71
PTPN18-215ENST00000490812 ADD2P35612 726 aa25.76■■□□□ 1.71
PTPN18-215ENST00000490812 RRP1P56182 461 aaKnown RBP25.76■■□□□ 1.71
PTPN18-215ENST00000490812 MTMR2Q13614 643 aa25.76■■□□□ 1.71
PTPN18-215ENST00000490812 MYPNQ86TC9 1320 aa25.75■■□□□ 1.71
PTPN18-215ENST00000490812 TMEM106CQ9BVX2 250 aa25.75■■□□□ 1.71
PTPN18-215ENST00000490812 ECHDC1Q9NTX5 307 aa25.75■■□□□ 1.71
PTPN18-215ENST00000490812 TMOD4Q9NZQ9 345 aa25.75■■□□□ 1.71
PTPN18-215ENST00000490812 POTEFA5A3E0 1075 aa25.74■■□□□ 1.71
PTPN18-215ENST00000490812 USP17L10C9JJH3 530 aa25.74■■□□□ 1.71
PTPN18-215ENST00000490812 ECM2O94769 699 aaPredicted RBP25.74■■□□□ 1.71
PTPN18-215ENST00000490812 GCLCP48506 637 aaPredicted RBP25.74■■□□□ 1.71
PTPN18-215ENST00000490812 FAM110CQ1W6H9 321 aa25.74■■□□□ 1.71
PTPN18-215ENST00000490812 LCORLQ8N3X6 602 aa25.74■■□□□ 1.71
PTPN18-215ENST00000490812 RAET1EQ8TD07 263 aa25.74■■□□□ 1.71
PTPN18-215ENST00000490812 GH2P01242 217 aa25.73■■□□□ 1.71
PTPN18-215ENST00000490812 POLR3DP05423 398 aaPredicted RBP25.73■■□□□ 1.71
PTPN18-215ENST00000490812 UBE3CQ15386 1083 aa25.73■■□□□ 1.71
PTPN18-215ENST00000490812 SHROOM1Q2M3G4 852 aaPredicted RBP25.73■■□□□ 1.71
PTPN18-215ENST00000490812 ZSCAN25Q6NSZ9 544 aa25.73■■□□□ 1.71
PTPN18-215ENST00000490812 SH3TC2Q8TF17 1288 aa25.73■■□□□ 1.71
PTPN18-215ENST00000490812 GPATCH3Q96I76 525 aa25.73■■□□□ 1.71
PTPN18-215ENST00000490812 MCM9Q9NXL9 1143 aa25.73■■□□□ 1.71
PTPN18-215ENST00000490812 TAOK2Q9UL54 1235 aa25.73■■□□□ 1.71
PTPN18-215ENST00000490812 BRCA2P51587 3418 aa25.73■■□□□ 1.71
PTPN18-215ENST00000490812 HOXA7P31268 230 aaPredicted RBP25.72■■□□□ 1.71
PTPN18-215ENST00000490812 PLCD1P51178 756 aa25.72■■□□□ 1.71
PTPN18-215ENST00000490812 ANKRD13CQ8N6S4 541 aa25.72■■□□□ 1.71
PTPN18-215ENST00000490812 ASCC2Q9H1I8 757 aaPredicted RBP25.72■■□□□ 1.71
PTPN18-215ENST00000490812 DCP1AQ9NPI6 582 aaPredicted RBP25.72■■□□□ 1.71
PTPN18-215ENST00000490812 PRKCZQ05513 592 aa25.71■■□□□ 1.71
PTPN18-215ENST00000490812 GABPAQ06546 454 aa25.71■■□□□ 1.71
PTPN18-215ENST00000490812 CERKLQ49MI3 558 aaPredicted RBP25.71■■□□□ 1.71
PTPN18-215ENST00000490812 SDR42E1Q8WUS8 393 aa25.71■■□□□ 1.71
PTPN18-215ENST00000490812 ARMT1Q9H993 441 aa25.71■■□□□ 1.71
PTPN18-215ENST00000490812 PCDHB15Q9Y5E8 787 aa25.71■■□□□ 1.71
PTPN18-215ENST00000490812 TNPO2O14787 897 aaKnown RBP25.7■■□□□ 1.7
PTPN18-215ENST00000490812 MBD4O95243 580 aa25.7■■□□□ 1.7
PTPN18-215ENST00000490812 GRK4P32298 578 aa25.7■■□□□ 1.7
PTPN18-215ENST00000490812 SHMT1P34896 483 aa25.7■■□□□ 1.7
PTPN18-215ENST00000490812 ABCB5Q2M3G0 1257 aa25.7■■□□□ 1.7
PTPN18-215ENST00000490812 ATP8A2Q9NTI2 1148 aa25.7■■□□□ 1.7
PTPN18-215ENST00000490812 IRX3P78415 501 aaPredicted RBP25.69■■□□□ 1.7
PTPN18-215ENST00000490812 USP17L2Q6R6M4 530 aa25.69■■□□□ 1.7
PTPN18-215ENST00000490812 CABP5Q9NP86 173 aa25.69■■□□□ 1.7
PTPN18-215ENST00000490812 SLAIN1Q8ND83 568 aa25.68■■□□□ 1.7
PTPN18-215ENST00000490812 MORF4L1Q9UBU8 362 aa25.68■■□□□ 1.7
PTPN18-215ENST00000490812 EN2P19622 333 aaPredicted RBP25.67■■□□□ 1.7
PTPN18-215ENST00000490812 IRF5Q13568 498 aa25.67■■□□□ 1.7
PTPN18-215ENST00000490812 RAB3GAP1Q15042 981 aa25.67■■□□□ 1.7
PTPN18-215ENST00000490812 SLFNL1Q499Z3 407 aa25.67■■□□□ 1.7
PTPN18-215ENST00000490812 COA7Q96BR5 231 aa25.67■■□□□ 1.7
PTPN18-215ENST00000490812 C12orf42Q96LP6 360 aa25.67■■□□□ 1.7
PTPN18-215ENST00000490812 EMILIN3Q9NT22 766 aa25.67■■□□□ 1.7
PTPN18-215ENST00000490812 SWAP70Q9UH65 585 aa25.67■■□□□ 1.7
PTPN18-215ENST00000490812 GABRQQ9UN88 632 aa25.67■■□□□ 1.7
PTPN18-215ENST00000490812 MYH8P13535 1937 aa25.67■■□□□ 1.7
PTPN18-215ENST00000490812 BAZ2AQ9UIF9 1905 aaKnown RBP25.67■■□□□ 1.7
PTPN18-215ENST00000490812 DOCK3Q8IZD9 2030 aa25.66■■□□□ 1.7
PTPN18-215ENST00000490812 FLT3LGP49771 235 aa25.66■■□□□ 1.7
PTPN18-215ENST00000490812 USP14P54578 494 aa25.66■■□□□ 1.7
PTPN18-215ENST00000490812 FEZ1Q99689 392 aa25.66■■□□□ 1.7
PTPN18-215ENST00000490812 KIAA1683Q9H0B3 1180 aa25.66■■□□□ 1.7
PTPN18-215ENST00000490812 PRKAB2O43741 272 aa25.65■■□□□ 1.7
PTPN18-215ENST00000490812 KBTBD3Q8NAB2 608 aa25.65■■□□□ 1.7
PTPN18-215ENST00000490812 GTF3C2Q8WUA4 911 aaPredicted RBP25.65■■□□□ 1.7
PTPN18-215ENST00000490812 DDRGK1Q96HY6 314 aa25.65■■□□□ 1.7
PTPN18-215ENST00000490812 TTC41PQ6P2S7 1318 aa25.64■■□□□ 1.7
PTPN18-215ENST00000490812 HERVK_113P62684 666 aa25.64■■□□□ 1.7
PTPN18-215ENST00000490812 UBXN2AP68543 259 aa25.64■■□□□ 1.7
PTPN18-215ENST00000490812 AMOTL1Q8IY63 956 aa25.64■■□□□ 1.7
PTPN18-215ENST00000490812 PXYLP1Q8TE99 480 aa25.64■■□□□ 1.7
PTPN18-215ENST00000490812 YTHDC1Q96MU7 727 aaKnown RBP25.64■■□□□ 1.7
PTPN18-215ENST00000490812 P2RX7Q99572 595 aaKnown RBP25.64■■□□□ 1.7
PTPN18-215ENST00000490812 MKI67P46013 3256 aaKnown RBP25.63■■□□□ 1.69
PTPN18-215ENST00000490812 ADCY3O60266 1144 aa25.63■■□□□ 1.69
PTPN18-215ENST00000490812 MYCP01106 439 aaPredicted RBP25.63■■□□□ 1.69
PTPN18-215ENST00000490812 CHGBP05060 677 aa25.63■■□□□ 1.69
PTPN18-215ENST00000490812 CYP2D6P10635 497 aa25.63■■□□□ 1.69
PTPN18-215ENST00000490812 EVX2Q03828 476 aa25.63■■□□□ 1.69
PTPN18-215ENST00000490812 CRBNQ96SW2 442 aa25.63■■□□□ 1.69
PTPN18-215ENST00000490812 PUS7LQ9H0K6 701 aaKnown RBP25.63■■□□□ 1.69
PTPN18-215ENST00000490812 GUCY1A2P33402 732 aa25.62■■□□□ 1.69
PTPN18-215ENST00000490812 MTFR1Q15390 333 aa25.62■■□□□ 1.69
PTPN18-215ENST00000490812 PRPF38BQ5VTL8 546 aaKnown RBP25.62■■□□□ 1.69
PTPN18-215ENST00000490812 BIN2Q9UBW5 565 aaPredicted RBP25.62■■□□□ 1.69
PTPN18-215ENST00000490812 SLC4A4Q9Y6R1 1079 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms