RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 TBC1D2BQ9UPU7 963 aa12.95□□□□□ -0.34
PCSK9-202ENST00000490692 MAP3K5Q99683 1374 aa12.95□□□□□ -0.34
PCSK9-202ENST00000490692 ALDH1L1O75891 902 aa12.94□□□□□ -0.34
PCSK9-202ENST00000490692 HNRNPH1P31943 449 aaKnown RBP12.94□□□□□ -0.34
PCSK9-202ENST00000490692 CCDC93Q567U6 631 aa12.94□□□□□ -0.34
PCSK9-202ENST00000490692 TNNI3KQ59H18 835 aa12.94□□□□□ -0.34
PCSK9-202ENST00000490692 RBM43Q6ZSC3 357 aaKnown RBP12.94□□□□□ -0.34
PCSK9-202ENST00000490692 CCDC42Q96M95 316 aa12.94□□□□□ -0.34
PCSK9-202ENST00000490692 FPGT-TNNI3KV9GXZ4 949 aa12.94□□□□□ -0.34
PCSK9-202ENST00000490692 MYO1FO00160 1098 aa12.94□□□□□ -0.34
PCSK9-202ENST00000490692 CASP1P29466 404 aa12.94□□□□□ -0.34
PCSK9-202ENST00000490692 C2orf54Q08AI8 447 aa12.94□□□□□ -0.34
PCSK9-202ENST00000490692 BEND6Q5SZJ8 279 aaPredicted RBP12.94□□□□□ -0.34
PCSK9-202ENST00000490692 KANK3Q6NY19 840 aa12.94□□□□□ -0.34
PCSK9-202ENST00000490692 CMTR1Q8N1G2 835 aaKnown RBP12.94□□□□□ -0.34
PCSK9-202ENST00000490692 TAF4BQ92750 862 aa12.94□□□□□ -0.34
PCSK9-202ENST00000490692 RSRC1Q96IZ7 334 aaKnown RBP12.94□□□□□ -0.34
PCSK9-202ENST00000490692 C19orf44Q9H6X5 657 aa12.94□□□□□ -0.34
PCSK9-202ENST00000490692 KAT14Q9H8E8 782 aa12.94□□□□□ -0.34
PCSK9-202ENST00000490692 CCDC196A0A1B0GTZ2 297 aa12.94□□□□□ -0.34
PCSK9-202ENST00000490692 SASH1O94885 1247 aa12.94□□□□□ -0.34
PCSK9-202ENST00000490692 CCDC57Q2TAC2 916 aa12.94□□□□□ -0.34
PCSK9-202ENST00000490692 MEX3CQ5U5Q3 659 aaKnown RBP12.94□□□□□ -0.34
PCSK9-202ENST00000490692 CACNA2D4Q7Z3S7 1137 aa12.94□□□□□ -0.34
PCSK9-202ENST00000490692 KIRREL3Q8IZU9 778 aa12.94□□□□□ -0.34
PCSK9-202ENST00000490692 EHBP1Q8NDI1 1231 aa12.94□□□□□ -0.34
PCSK9-202ENST00000490692 DYDC1Q8WWB3 177 aa12.94□□□□□ -0.34
PCSK9-202ENST00000490692 ALS2CR12Q96Q35 445 aa12.94□□□□□ -0.34
PCSK9-202ENST00000490692 SHPRHQ149N8 1683 aa12.94□□□□□ -0.34
PCSK9-202ENST00000490692 MINDY4BA8MYZ0 360 aa12.93□□□□□ -0.34
PCSK9-202ENST00000490692 BUB1BO60566 1050 aaPredicted RBP12.93□□□□□ -0.34
PCSK9-202ENST00000490692 TACC1O75410 805 aa12.93□□□□□ -0.34
PCSK9-202ENST00000490692 CXCR5P32302 372 aa12.93□□□□□ -0.34
PCSK9-202ENST00000490692 C8orf74Q6P047 294 aa12.93□□□□□ -0.34
PCSK9-202ENST00000490692 ANKRD13CQ8N6S4 541 aa12.93□□□□□ -0.34
PCSK9-202ENST00000490692 WASF1Q92558 559 aa12.93□□□□□ -0.34
PCSK9-202ENST00000490692 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.93□□□□□ -0.34
PCSK9-202ENST00000490692 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.93□□□□□ -0.342e-6■■□□□ 12
PCSK9-202ENST00000490692 PSD3Q9NYI0 1048 aa12.93□□□□□ -0.34
PCSK9-202ENST00000490692 hCG_1642624A0A1W2PR95 340 aa12.93□□□□□ -0.34
PCSK9-202ENST00000490692 TLDC2A0PJX2 215 aa12.93□□□□□ -0.34
PCSK9-202ENST00000490692 EPS15P42566 896 aa12.93□□□□□ -0.34
PCSK9-202ENST00000490692 ARID5AQ03989 594 aa12.93□□□□□ -0.34
PCSK9-202ENST00000490692 POLA2Q14181 598 aa12.93□□□□□ -0.34
PCSK9-202ENST00000490692 SMARCC2Q8TAQ2 1214 aa12.93□□□□□ -0.34
PCSK9-202ENST00000490692 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.93□□□□□ -0.34
PCSK9-202ENST00000490692 RIPOR2Q9Y4F9 1068 aa12.93□□□□□ -0.34
PCSK9-202ENST00000490692 SBNO1A3KN83 1393 aa12.93□□□□□ -0.34
PCSK9-202ENST00000490692 B4E1Z4 1266 aa12.93□□□□□ -0.34
PCSK9-202ENST00000490692 GIGYF1O75420 1035 aaPredicted RBP12.93□□□□□ -0.34
PCSK9-202ENST00000490692 CDC25AP30304 524 aa12.93□□□□□ -0.34
PCSK9-202ENST00000490692 KRT83P78385 493 aa12.93□□□□□ -0.34
PCSK9-202ENST00000490692 DIS3L2Q8IYB7 885 aaKnown RBP12.93□□□□□ -0.34
PCSK9-202ENST00000490692 RAPGEF4Q8WZA2 1011 aa12.93□□□□□ -0.34
PCSK9-202ENST00000490692 ADGRG1Q9Y653 693 aa12.93□□□□□ -0.34
PCSK9-202ENST00000490692 FAM170AA1A519 330 aa12.92□□□□□ -0.34
PCSK9-202ENST00000490692 IRF6O14896 467 aa12.92□□□□□ -0.34
PCSK9-202ENST00000490692 TUBB2AQ13885 445 aa12.92□□□□□ -0.34
PCSK9-202ENST00000490692 PROSER3Q2NL68 480 aa12.92□□□□□ -0.34
PCSK9-202ENST00000490692 TUBB2BQ9BVA1 445 aa12.92□□□□□ -0.34
PCSK9-202ENST00000490692 NAPBQ9H115 298 aa12.92□□□□□ -0.34
PCSK9-202ENST00000490692 EHD4Q9H223 541 aa12.92□□□□□ -0.34
PCSK9-202ENST00000490692 CD248Q9HCU0 757 aa12.92□□□□□ -0.34
PCSK9-202ENST00000490692 DBNLQ9UJU6 430 aaKnown RBP12.92□□□□□ -0.34
PCSK9-202ENST00000490692 SALL3Q9BXA9 1300 aa12.92□□□□□ -0.34
PCSK9-202ENST00000490692 EIF4E1BA6NMX2 242 aaKnown RBP12.92□□□□□ -0.34
PCSK9-202ENST00000490692 LRRIQ3A6PVS8 624 aaPredicted RBP12.92□□□□□ -0.34
PCSK9-202ENST00000490692 SLC39A14Q15043 492 aa12.92□□□□□ -0.34
PCSK9-202ENST00000490692 ENGASEQ8NFI3 743 aa12.92□□□□□ -0.34
PCSK9-202ENST00000490692 ZC3H6P61129 1189 aaKnown RBP12.92□□□□□ -0.34
PCSK9-202ENST00000490692 PTPROQ16827 1216 aa12.92□□□□□ -0.34
PCSK9-202ENST00000490692 KBTBD3Q8NAB2 608 aa12.92□□□□□ -0.34
PCSK9-202ENST00000490692 SELENOOQ9BVL4 669 aa12.92□□□□□ -0.34
PCSK9-202ENST00000490692 CNNM1Q9NRU3 951 aa12.92□□□□□ -0.34
PCSK9-202ENST00000490692 POLR3EQ9NVU0 708 aa12.92□□□□□ -0.34
PCSK9-202ENST00000490692 TMCO5BA8MYB1 307 aa12.91□□□□□ -0.34
PCSK9-202ENST00000490692 BTBD18B2RXH4 712 aa12.91□□□□□ -0.34
PCSK9-202ENST00000490692 MMRN2Q9H8L6 949 aa12.91□□□□□ -0.34
PCSK9-202ENST00000490692 MAN1B1Q9UKM7 699 aa12.91□□□□□ -0.34
PCSK9-202ENST00000490692 EPN1Q9Y6I3 576 aaPredicted RBP12.91□□□□□ -0.34
PCSK9-202ENST00000490692 RNF113AO15541 343 aaKnown RBP12.91□□□□□ -0.34
PCSK9-202ENST00000490692 HSPD1P10809 573 aaKnown RBP12.91□□□□□ -0.34
PCSK9-202ENST00000490692 SIRT1Q96EB6 747 aa12.91□□□□□ -0.34
PCSK9-202ENST00000490692 PLEKHG2Q9H7P9 1386 aa12.91□□□□□ -0.34
PCSK9-202ENST00000490692 PPP1R12BO60237 982 aaPredicted RBP12.91□□□□□ -0.34
PCSK9-202ENST00000490692 SF3B2Q13435 895 aaKnown RBP12.91□□□□□ -0.34
PCSK9-202ENST00000490692 RAD9BQ6WBX8 426 aa12.91□□□□□ -0.34
PCSK9-202ENST00000490692 SH2D3CQ8N5H7 860 aa12.91□□□□□ -0.34
PCSK9-202ENST00000490692 DNAJC5Q9H3Z4 198 aa12.91□□□□□ -0.34
PCSK9-202ENST00000490692 CPSF2Q9P2I0 782 aaKnown RBP12.91□□□□□ -0.34
PCSK9-202ENST00000490692 L1RE1Q9UN81 338 aa12.91□□□□□ -0.34
PCSK9-202ENST00000490692 CLTAP09496 248 aa12.9□□□□□ -0.34
PCSK9-202ENST00000490692 SCP2P22307 547 aa12.9□□□□□ -0.34
PCSK9-202ENST00000490692 KIF23Q02241 960 aaPredicted RBP12.9□□□□□ -0.34
PCSK9-202ENST00000490692 PPP1R7Q15435 360 aa12.9□□□□□ -0.34
PCSK9-202ENST00000490692 ZNF174Q15697 407 aa12.9□□□□□ -0.34
PCSK9-202ENST00000490692 TC2NQ8N9U0 490 aa12.9□□□□□ -0.34
PCSK9-202ENST00000490692 LRRC59Q96AG4 307 aaKnown RBP12.9□□□□□ -0.34
PCSK9-202ENST00000490692 SELENOSQ9BQE4 189 aa12.9□□□□□ -0.34
PCSK9-202ENST00000490692 TRIM10Q9UDY6 481 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms