RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 MAST2Q6P0Q8 1798 aa9.2□□□□□ -0.94
PDLIM1-203ENST00000490391 WDFY4Q6ZS81 3184 aa9.2□□□□□ -0.94
PDLIM1-203ENST00000490391 TNPO2O14787 897 aaKnown RBP9.2□□□□□ -0.94
PDLIM1-203ENST00000490391 FOSL2P15408 326 aa9.2□□□□□ -0.94
PDLIM1-203ENST00000490391 IGHMBP2P38935 993 aaKnown RBP9.2□□□□□ -0.94
PDLIM1-203ENST00000490391 TNNI2P48788 182 aa9.2□□□□□ -0.94
PDLIM1-203ENST00000490391 CHRNDQ07001 517 aa9.2□□□□□ -0.94
PDLIM1-203ENST00000490391 TRIM32Q13049 653 aa9.2□□□□□ -0.94
PDLIM1-203ENST00000490391 LRRC26Q2I0M4 334 aa9.2□□□□□ -0.94
PDLIM1-203ENST00000490391 KMT5BQ4FZB7 885 aa9.2□□□□□ -0.94
PDLIM1-203ENST00000490391 PHAXQ9H814 394 aaKnown RBP9.2□□□□□ -0.94
PDLIM1-203ENST00000490391 ARIH1Q9Y4X5 557 aaPredicted RBP9.2□□□□□ -0.94
PDLIM1-203ENST00000490391 PTPRFP10586 1907 aa9.2□□□□□ -0.94
PDLIM1-203ENST00000490391 HMGCRP04035 888 aa9.19□□□□□ -0.94
PDLIM1-203ENST00000490391 IGKV5-2P06315 115 aa9.19□□□□□ -0.94
PDLIM1-203ENST00000490391 CRKP46108 304 aa9.19□□□□□ -0.94
PDLIM1-203ENST00000490391 RPIAP49247 311 aa9.19□□□□□ -0.94
PDLIM1-203ENST00000490391 CACNB3P54284 484 aa9.19□□□□□ -0.94
PDLIM1-203ENST00000490391 RIPK4P57078 832 aa9.19□□□□□ -0.94
PDLIM1-203ENST00000490391 ZNF804AQ7Z570 1209 aa9.19□□□□□ -0.94
PDLIM1-203ENST00000490391 METTL22Q9BUU2 404 aaPredicted RBP9.19□□□□□ -0.94
PDLIM1-203ENST00000490391 TTF2Q9UNY4 1162 aaKnown RBP9.19□□□□□ -0.94
PDLIM1-203ENST00000490391 MAPK8IP3Q9UPT6 1336 aa9.19□□□□□ -0.94
PDLIM1-203ENST00000490391 RPAP1Q9BWH6 1393 aaPredicted RBP9.19□□□□□ -0.94
PDLIM1-203ENST00000490391 PLXNB2O15031 1838 aa9.18□□□□□ -0.94
PDLIM1-203ENST00000490391 NR1I2O75469 434 aa9.18□□□□□ -0.94
PDLIM1-203ENST00000490391 TAF5LO75529 589 aa9.18□□□□□ -0.94
PDLIM1-203ENST00000490391 SNRPBP14678 240 aaKnown RBP9.18□□□□□ -0.94
PDLIM1-203ENST00000490391 ITGA6P23229 1130 aa9.18□□□□□ -0.94
PDLIM1-203ENST00000490391 KCNJ4P48050 445 aa9.18□□□□□ -0.94
PDLIM1-203ENST00000490391 GRIK5Q16478 980 aa9.18□□□□□ -0.94
PDLIM1-203ENST00000490391 MFSD14BQ5SR56 506 aa9.18□□□□□ -0.94
PDLIM1-203ENST00000490391 MAP3K21Q5TCX8 1036 aa9.18□□□□□ -0.94
PDLIM1-203ENST00000490391 FAM83AQ86UY5 434 aa9.18□□□□□ -0.94
PDLIM1-203ENST00000490391 SNX27Q96L92 541 aa9.18□□□□□ -0.94
PDLIM1-203ENST00000490391 HMX1Q9NP08 348 aaPredicted RBP9.18□□□□□ -0.94
PDLIM1-203ENST00000490391 ZNF112Q9UJU3 913 aa9.18□□□□□ -0.94
PDLIM1-203ENST00000490391 CLSPNQ9HAW4 1339 aa9.17□□□□□ -0.94
PDLIM1-203ENST00000490391 A0A0G2JLL6 359 aaPredicted RBP9.17□□□□□ -0.94
PDLIM1-203ENST00000490391 SMAD3P84022 425 aaKnown RBP9.17□□□□□ -0.94
PDLIM1-203ENST00000490391 NOL9Q5SY16 702 aaKnown RBP9.17□□□□□ -0.94
PDLIM1-203ENST00000490391 C9orf50Q5SZB4 431 aa9.17□□□□□ -0.94
PDLIM1-203ENST00000490391 FKBP1CQ5VVH2 108 aa9.17□□□□□ -0.94
PDLIM1-203ENST00000490391 PRRT2Q7Z6L0 340 aaPredicted RBP9.17□□□□□ -0.94
PDLIM1-203ENST00000490391 MPHOSPH8Q99549 860 aa9.17□□□□□ -0.94
PDLIM1-203ENST00000490391 ZNF341Q9BYN7 854 aa9.17□□□□□ -0.94
PDLIM1-203ENST00000490391 GJD2Q9UKL4 321 aa9.17□□□□□ -0.94
PDLIM1-203ENST00000490391 AK9Q5TCS8 1911 aa9.17□□□□□ -0.94
PDLIM1-203ENST00000490391 CXCL11O14625 94 aa9.16□□□□□ -0.94
PDLIM1-203ENST00000490391 CSF1RP07333 972 aa9.16□□□□□ -0.94
PDLIM1-203ENST00000490391 TMPOP42166 694 aaKnown RBP9.16□□□□□ -0.94
PDLIM1-203ENST00000490391 SUZ12Q15022 739 aaKnown RBP9.16□□□□□ -0.94
PDLIM1-203ENST00000490391 SHHQ15465 462 aa9.16□□□□□ -0.94
PDLIM1-203ENST00000490391 DUSP27Q5VZP5 1158 aa9.16□□□□□ -0.94
PDLIM1-203ENST00000490391 DCAF15Q66K64 600 aa9.16□□□□□ -0.94
PDLIM1-203ENST00000490391 MIGA2Q7L4E1 593 aa9.16□□□□□ -0.94
PDLIM1-203ENST00000490391 TDRD7Q8NHU6 1098 aaKnown RBP9.16□□□□□ -0.94
PDLIM1-203ENST00000490391 ADAMTS19Q8TE59 1207 aa9.16□□□□□ -0.94
PDLIM1-203ENST00000490391 COA7Q96BR5 231 aa9.16□□□□□ -0.94
PDLIM1-203ENST00000490391 PLA2G12BQ9BX93 195 aa9.16□□□□□ -0.94
PDLIM1-203ENST00000490391 ATP13A2Q9NQ11 1180 aa9.16□□□□□ -0.94
PDLIM1-203ENST00000490391 SLC45A1Q9Y2W3 748 aa9.16□□□□□ -0.94
PDLIM1-203ENST00000490391 USP34Q70CQ2 3546 aa9.16□□□□□ -0.94
PDLIM1-203ENST00000490391 CFAP54Q96N23 3096 aa9.16□□□□□ -0.94
PDLIM1-203ENST00000490391 FRMPD3Q5JV73 1810 aa9.15□□□□□ -0.94
PDLIM1-203ENST00000490391 H7C1W4 665 aa9.15□□□□□ -0.94
PDLIM1-203ENST00000490391 CD2BP2O95400 341 aaKnown RBP9.15□□□□□ -0.94
PDLIM1-203ENST00000490391 DNAJB2P25686 324 aa9.15□□□□□ -0.94
PDLIM1-203ENST00000490391 HDLBPQ00341 1268 aaKnown RBP9.15□□□□□ -0.94
PDLIM1-203ENST00000490391 LMOD3Q0VAK6 560 aa9.15□□□□□ -0.94
PDLIM1-203ENST00000490391 TRIB2Q92519 343 aa9.15□□□□□ -0.94
PDLIM1-203ENST00000490391 HOOK2Q96ED9 719 aa9.15□□□□□ -0.94
PDLIM1-203ENST00000490391 LBHD1Q9BQE6 289 aaPredicted RBP9.15□□□□□ -0.94
PDLIM1-203ENST00000490391 PHIPQ8WWQ0 1821 aa9.15□□□□□ -0.95
PDLIM1-203ENST00000490391 CFHP08603 1231 aa9.14□□□□□ -0.95
PDLIM1-203ENST00000490391 CASP7P55210 303 aa9.14□□□□□ -0.95
PDLIM1-203ENST00000490391 GRIN2CQ14957 1233 aa9.14□□□□□ -0.95
PDLIM1-203ENST00000490391 FAM110CQ1W6H9 321 aa9.14□□□□□ -0.95
PDLIM1-203ENST00000490391 CWF19L2Q2TBE0 894 aaKnown RBP9.14□□□□□ -0.95
PDLIM1-203ENST00000490391 APOBEC3HQ6NTF7 200 aaKnown RBP9.14□□□□□ -0.95
PDLIM1-203ENST00000490391 UBE3BQ7Z3V4 1068 aa9.14□□□□□ -0.95
PDLIM1-203ENST00000490391 ANKRD13CQ8N6S4 541 aa9.14□□□□□ -0.95
PDLIM1-203ENST00000490391 ATXN2LQ8WWM7 1075 aaKnown RBP9.14□□□□□ -0.95
PDLIM1-203ENST00000490391 ASB2Q96Q27 587 aa9.14□□□□□ -0.95
PDLIM1-203ENST00000490391 UHRF1Q96T88 793 aaPredicted RBP9.14□□□□□ -0.95
PDLIM1-203ENST00000490391 SENP2Q9HC62 589 aa9.14□□□□□ -0.95
PDLIM1-203ENST00000490391 MAP3K2Q9Y2U5 619 aa9.14□□□□□ -0.95
PDLIM1-203ENST00000490391 ZDBF2Q9HCK1 2354 aa9.14□□□□□ -0.95
PDLIM1-203ENST00000490391 SPTBN4Q9H254 2564 aa9.14□□□□□ -0.95
PDLIM1-203ENST00000490391 ATRNL1Q5VV63 1379 aa9.13□□□□□ -0.95
PDLIM1-203ENST00000490391 NEURL1BA8MQ27 555 aa9.13□□□□□ -0.95
PDLIM1-203ENST00000490391 FASTKD5Q7L8L6 764 aaKnown RBP9.13□□□□□ -0.95
PDLIM1-203ENST00000490391 SMCR8Q8TEV9 937 aaPredicted RBP9.13□□□□□ -0.95
PDLIM1-203ENST00000490391 ZDHHC15Q96MV8 337 aa9.13□□□□□ -0.95
PDLIM1-203ENST00000490391 C1QTNF1Q9BXJ1 281 aa9.13□□□□□ -0.95
PDLIM1-203ENST00000490391 PNNQ9H307 717 aaKnown RBP9.13□□□□□ -0.95
PDLIM1-203ENST00000490391 TMEM134Q9H6X4 195 aa9.13□□□□□ -0.95
PDLIM1-203ENST00000490391 TCF20Q9UGU0 1960 aaKnown RBP9.12□□□□□ -0.95
PDLIM1-203ENST00000490391 PI4KAP2A4QPH2 592 aa9.12□□□□□ -0.95
PDLIM1-203ENST00000490391 LORP23490 312 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms