RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 SERPINB3P29508 390 aa3.93□□□□□ -1.78
UBXN4-208ENST00000490163 EIF5P55010 431 aaKnown RBP3.93□□□□□ -1.78
UBXN4-208ENST00000490163 GPLD1P80108 840 aa3.93□□□□□ -1.78
UBXN4-208ENST00000490163 SETQ01105 290 aaPredicted RBP3.93□□□□□ -1.78
UBXN4-208ENST00000490163 APOBRQ0VD83 1088 aa3.93□□□□□ -1.78
UBXN4-208ENST00000490163 NTRK3Q16288 839 aa3.93□□□□□ -1.78
UBXN4-208ENST00000490163 HSF5Q4G112 596 aaPredicted RBP3.93□□□□□ -1.78
UBXN4-208ENST00000490163 CMTR2Q8IYT2 770 aaKnown RBP3.93□□□□□ -1.78
UBXN4-208ENST00000490163 TNFRSF25Q93038 417 aa3.93□□□□□ -1.78
UBXN4-208ENST00000490163 MRGPRX2Q96LB1 330 aa3.93□□□□□ -1.78
UBXN4-208ENST00000490163 TLL2Q9Y6L7 1015 aa3.93□□□□□ -1.78
UBXN4-208ENST00000490163 HMGB1P1B2RPK0 211 aaPredicted RBP3.93□□□□□ -1.78
UBXN4-208ENST00000490163 ERC2O15083 957 aa3.93□□□□□ -1.78
UBXN4-208ENST00000490163 EFCAB14O75071 495 aa3.93□□□□□ -1.78
UBXN4-208ENST00000490163 LDHAP00338 332 aaKnown RBP3.93□□□□□ -1.78
UBXN4-208ENST00000490163 EPB42P16452 691 aa3.93□□□□□ -1.78
UBXN4-208ENST00000490163 PAX3P23760 479 aa3.93□□□□□ -1.78
UBXN4-208ENST00000490163 CHMP4BP1P59074 171 aa3.93□□□□□ -1.78
UBXN4-208ENST00000490163 NNTQ13423 1086 aa3.93□□□□□ -1.78
UBXN4-208ENST00000490163 GFOD2Q3B7J2 385 aa3.93□□□□□ -1.78
UBXN4-208ENST00000490163 SLC35F1Q5T1Q4 408 aa3.93□□□□□ -1.78
UBXN4-208ENST00000490163 KRT78Q8N1N4 520 aa3.93□□□□□ -1.78
UBXN4-208ENST00000490163 TMTC2Q8N394 836 aa3.93□□□□□ -1.78
UBXN4-208ENST00000490163 KCNH4Q9UQ05 1017 aa3.93□□□□□ -1.78
UBXN4-208ENST00000490163 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.92□□□□□ -1.78
UBXN4-208ENST00000490163 KHNYNO15037 678 aaKnown RBP3.92□□□□□ -1.78
UBXN4-208ENST00000490163 POLR3DP05423 398 aaPredicted RBP3.92□□□□□ -1.78
UBXN4-208ENST00000490163 RBP3P10745 1247 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 SMPD1P17405 629 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 PHC1P78364 1004 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 PTPN11Q06124 597 aaPredicted RBP3.92□□□□□ -1.78
UBXN4-208ENST00000490163 CBX2Q14781 532 aaPredicted RBP3.92□□□□□ -1.78
UBXN4-208ENST00000490163 NBPF1Q3BBV0 1214 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 CHPFQ8IZ52 775 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 CRIPAKQ8N1N5 446 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 CCDC24Q8N4L8 307 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 OR10H5Q8NGA6 315 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 PPM1EQ8WY54 764 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 SSH1Q8WYL5 1049 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 SLC12A5Q9H2X9 1139 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 DISC1Q9NRI5 854 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 TMEM39AQ9NV64 488 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 HCSTQ9UBK5 93 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 PCDHB14Q9Y5E9 798 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 MRVI1Q9Y6F6 885 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 SOBPA7XYQ1 873 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 VCAM1P19320 739 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 CDC27P30260 824 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 NTF4P34130 210 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 RAB27AP51159 221 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 LRRC41Q15345 812 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 SNAP47Q5SQN1 464 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 MROH2BQ7Z745 1585 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 KRT77Q7Z794 578 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 SPATS2Q86XZ4 545 aaKnown RBP3.92□□□□□ -1.78
UBXN4-208ENST00000490163 AMOTL1Q8IY63 956 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 STK11IPQ8N1F8 1099 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 WIZO95785 1651 aa3.92□□□□□ -1.78
UBXN4-208ENST00000490163 SENP3-EIF4A1A0A087X0R7 540 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 TRAF5O00463 557 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 MMP20O60882 483 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 RXRGP48443 463 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 PMS1P54277 932 aaKnown RBP3.91□□□□□ -1.78
UBXN4-208ENST00000490163 MAP4K2Q12851 820 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 RSPO2Q6UXX9 243 aaPredicted RBP3.91□□□□□ -1.78
UBXN4-208ENST00000490163 C14orf80Q86SX3 495 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 LRRTM3Q86VH5 581 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 PPFIBP1Q86W92 1011 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 MTA3Q9BTC8 594 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 RAB6BQ9NRW1 208 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 G3BP2Q9UN86 482 aaKnown RBP3.91□□□□□ -1.78
UBXN4-208ENST00000490163 TBX3O15119 743 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 SHOXO15266 292 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 CNOT4O95628 575 aaKnown RBP3.91□□□□□ -1.78
UBXN4-208ENST00000490163 WASP42768 502 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 FCGRTP55899 365 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 EFR3AQ14156 821 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 CEP89Q96ST8 783 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 PBX4Q9BYU1 374 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 MUC3BQ9H195 1237 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 SLC5A4Q9NY91 659 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 CC2D2AQ9P2K1 1620 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 SETD1BQ9UPS6 1966 aaKnown RBP3.91□□□□□ -1.78
UBXN4-208ENST00000490163 A0A1W2PNR3 127 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 F5H0A9 414 aaPredicted RBP3.91□□□□□ -1.78
UBXN4-208ENST00000490163 ARVCFO00192 962 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 SLC5A1P13866 664 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 DSG1Q02413 1049 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 MTERF2Q49AM1 385 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 SEZ6Q53EL9 994 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 DGKKQ5KSL6 1271 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 STYK1Q6J9G0 422 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 ZNF598Q86UK7 904 aaKnown RBP3.91□□□□□ -1.78
UBXN4-208ENST00000490163 MRPL41Q8IXM3 137 aaKnown RBP3.91□□□□□ -1.78
UBXN4-208ENST00000490163 SCLYQ96I15 445 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 NGLY1Q96IV0 654 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 HSH2DQ96JZ2 352 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 ARPC5LQ9BPX5 153 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 TAGLN3Q9UI15 199 aa3.91□□□□□ -1.78
UBXN4-208ENST00000490163 PPEF1O14829 653 aaPredicted RBP3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms