RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 ORC4O43929 436 aa17.24■□□□□ 0.35
COL9A1-208ENST00000489611 DDAH1O94760 285 aa17.24■□□□□ 0.35
COL9A1-208ENST00000489611 SLC15A2Q16348 729 aa17.24■□□□□ 0.35
COL9A1-208ENST00000489611 RESP18Q5W5W9 173 aa17.24■□□□□ 0.35
COL9A1-208ENST00000489611 CATIPQ7Z7H3 387 aa17.24■□□□□ 0.35
COL9A1-208ENST00000489611 CCDC144CPQ8IYA2 1237 aa17.24■□□□□ 0.35
COL9A1-208ENST00000489611 SPC24Q8NBT2 197 aa17.24■□□□□ 0.35
COL9A1-208ENST00000489611 AIFM3Q96NN9 605 aa17.24■□□□□ 0.35
COL9A1-208ENST00000489611 INCENPQ9NQS7 918 aa17.24■□□□□ 0.35
COL9A1-208ENST00000489611 GJB4Q9NTQ9 266 aa17.24■□□□□ 0.35
COL9A1-208ENST00000489611 ARPP21Q9UBL0 812 aaPredicted RBP17.24■□□□□ 0.35
COL9A1-208ENST00000489611 MYH6P13533 1939 aa17.24■□□□□ 0.35
COL9A1-208ENST00000489611 RGPD3A6NKT7 1758 aaPredicted RBP17.24■□□□□ 0.35
COL9A1-208ENST00000489611 RGPD4Q7Z3J3 1758 aa17.24■□□□□ 0.35
COL9A1-208ENST00000489611 NLRP12P59046 1061 aa17.23■□□□□ 0.35
COL9A1-208ENST00000489611 SBK1Q52WX2 424 aa17.23■□□□□ 0.35
COL9A1-208ENST00000489611 MSL1Q68DK7 614 aa17.23■□□□□ 0.35
COL9A1-208ENST00000489611 CERS3Q8IU89 383 aa17.23■□□□□ 0.35
COL9A1-208ENST00000489611 DHX40Q8IX18 779 aaKnown RBP17.23■□□□□ 0.35
COL9A1-208ENST00000489611 KRI1Q8N9T8 703 aaKnown RBP17.23■□□□□ 0.35
COL9A1-208ENST00000489611 SDR42E1Q8WUS8 393 aa17.23■□□□□ 0.35
COL9A1-208ENST00000489611 ZNF830Q96NB3 372 aaPredicted RBP17.23■□□□□ 0.35
COL9A1-208ENST00000489611 MYL10Q9BUA6 226 aa17.23■□□□□ 0.35
COL9A1-208ENST00000489611 IQSEC3Q9UPP2 1182 aaPredicted RBP17.23■□□□□ 0.35
COL9A1-208ENST00000489611 NLGN1Q8N2Q7 840 aa17.23■□□□□ 0.35
COL9A1-208ENST00000489611 ZNF579Q8NAF0 562 aaKnown RBP17.23■□□□□ 0.35
COL9A1-208ENST00000489611 LEMD3Q9Y2U8 911 aa17.23■□□□□ 0.35
COL9A1-208ENST00000489611 IKBKBO14920 756 aa17.22■□□□□ 0.35
COL9A1-208ENST00000489611 WDHD1O75717 1129 aaPredicted RBP17.22■□□□□ 0.35
COL9A1-208ENST00000489611 BMP15O95972 392 aa17.22■□□□□ 0.35
COL9A1-208ENST00000489611 ST5P78524 1137 aa17.22■□□□□ 0.35
COL9A1-208ENST00000489611 IFIT1BQ5T764 474 aaKnown RBP17.22■□□□□ 0.35
COL9A1-208ENST00000489611 DIS3L2Q8IYB7 885 aaKnown RBP17.22■□□□□ 0.35
COL9A1-208ENST00000489611 KCNF1Q9H3M0 494 aa17.22■□□□□ 0.35
COL9A1-208ENST00000489611 STK32BQ9NY57 414 aa17.22■□□□□ 0.35
COL9A1-208ENST00000489611 TUBE1Q9UJT0 475 aa17.22■□□□□ 0.35
COL9A1-208ENST00000489611 TNRC6CQ9HCJ0 1690 aaKnown RBP17.22■□□□□ 0.35
COL9A1-208ENST00000489611 DYNC1I1O14576 645 aa17.21■□□□□ 0.35
COL9A1-208ENST00000489611 MECOMQ03112 1051 aa17.21■□□□□ 0.35
COL9A1-208ENST00000489611 CHAF1AQ13111 956 aaPredicted RBP17.21■□□□□ 0.35
COL9A1-208ENST00000489611 CCDC186Q7Z3E2 898 aa17.21■□□□□ 0.35
COL9A1-208ENST00000489611 CCDC34Q96HJ3 373 aa17.21■□□□□ 0.35
COL9A1-208ENST00000489611 IMPACTQ9P2X3 320 aa17.21■□□□□ 0.35
COL9A1-208ENST00000489611 BAZ2AQ9UIF9 1905 aaKnown RBP17.21■□□□□ 0.35
COL9A1-208ENST00000489611 MYH2Q9UKX2 1941 aa17.21■□□□□ 0.35
COL9A1-208ENST00000489611 PRPF3O43395 683 aaKnown RBP17.21■□□□□ 0.35
COL9A1-208ENST00000489611 GSDMDP57764 484 aa17.21■□□□□ 0.35
COL9A1-208ENST00000489611 PDE4BQ07343 736 aa17.21■□□□□ 0.35
COL9A1-208ENST00000489611 CCDC178Q5BJE1 867 aa17.21■□□□□ 0.35
COL9A1-208ENST00000489611 CTR9Q6PD62 1173 aa17.21■□□□□ 0.35
COL9A1-208ENST00000489611 ENAHQ8N8S7 591 aaPredicted RBP17.21■□□□□ 0.35
COL9A1-208ENST00000489611 WDR66Q8TBY9 1149 aa17.21■□□□□ 0.35
COL9A1-208ENST00000489611 ZKSCAN3Q9BRR0 538 aa17.21■□□□□ 0.35
COL9A1-208ENST00000489611 FAM13BQ9NYF5 915 aa17.21■□□□□ 0.35
COL9A1-208ENST00000489611 PTGS1P23219 599 aa17.2■□□□□ 0.34
COL9A1-208ENST00000489611 MARCKSP29966 332 aaPredicted RBP17.2■□□□□ 0.34
COL9A1-208ENST00000489611 GSTO1P78417 241 aa17.2■□□□□ 0.34
COL9A1-208ENST00000489611 KANK3Q6NY19 840 aa17.2■□□□□ 0.34
COL9A1-208ENST00000489611 SHC4Q6S5L8 630 aa17.2■□□□□ 0.34
COL9A1-208ENST00000489611 C15orf52Q6ZUT6 534 aaKnown RBP17.2■□□□□ 0.34
COL9A1-208ENST00000489611 NUP133Q8WUM0 1156 aa17.2■□□□□ 0.34
COL9A1-208ENST00000489611 BRMS1Q9HCU9 246 aa17.2■□□□□ 0.34
COL9A1-208ENST00000489611 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.2■□□□□ 0.34
COL9A1-208ENST00000489611 WTIPA6NIX2 430 aaPredicted RBP17.19■□□□□ 0.34
COL9A1-208ENST00000489611 BTBD18B2RXH4 712 aa17.19■□□□□ 0.34
COL9A1-208ENST00000489611 MMP10P09238 476 aa17.19■□□□□ 0.34
COL9A1-208ENST00000489611 AOPEPQ8N6M6 819 aa17.19■□□□□ 0.34
COL9A1-208ENST00000489611 MROH7-TTC4A0A0A0MT08 1334 aa17.19■□□□□ 0.34
COL9A1-208ENST00000489611 PTPREP23469 700 aa17.19■□□□□ 0.34
COL9A1-208ENST00000489611 SLC51AQ86UW1 340 aa17.19■□□□□ 0.34
COL9A1-208ENST00000489611 DCP1AQ9NPI6 582 aaPredicted RBP17.19■□□□□ 0.34
COL9A1-208ENST00000489611 KCNH3Q9ULD8 1083 aa17.19■□□□□ 0.34
COL9A1-208ENST00000489611 USP17L12C9JPN9 530 aa17.18■□□□□ 0.34
COL9A1-208ENST00000489611 USP17L21D6R901 530 aa17.18■□□□□ 0.34
COL9A1-208ENST00000489611 DYNLL1P63167 89 aaKnown RBP17.18■□□□□ 0.34
COL9A1-208ENST00000489611 GRAPQ13588 217 aa17.18■□□□□ 0.34
COL9A1-208ENST00000489611 GRAPLQ8TC17 118 aaPredicted RBP17.18■□□□□ 0.34
COL9A1-208ENST00000489611 ZNF384Q8TF68 577 aa17.18■□□□□ 0.34
COL9A1-208ENST00000489611 PDGFDQ9GZP0 370 aaPredicted RBP17.18■□□□□ 0.34
COL9A1-208ENST00000489611 XDHP47989 1333 aa17.18■□□□□ 0.34
COL9A1-208ENST00000489611 IRS2Q9Y4H2 1338 aa17.18■□□□□ 0.34
COL9A1-208ENST00000489611 RRP9O43818 475 aaKnown RBP17.17■□□□□ 0.34
COL9A1-208ENST00000489611 TROAPQ12815 778 aa17.17■□□□□ 0.34
COL9A1-208ENST00000489611 DPCR1Q3MIW9 517 aa17.17■□□□□ 0.34
COL9A1-208ENST00000489611 KRBA2Q6ZNG9 492 aa17.17■□□□□ 0.34
COL9A1-208ENST00000489611 MTERF4Q7Z6M4 381 aaKnown RBP17.17■□□□□ 0.34
COL9A1-208ENST00000489611 DZIP1Q86YF9 867 aaKnown RBP17.17■□□□□ 0.34
COL9A1-208ENST00000489611 AMOTL1Q8IY63 956 aa17.17■□□□□ 0.34
COL9A1-208ENST00000489611 MPNDQ8N594 471 aa17.17■□□□□ 0.34
COL9A1-208ENST00000489611 MYRIPQ8NFW9 859 aa17.17■□□□□ 0.34
COL9A1-208ENST00000489611 CTCFLQ8NI51 663 aaPredicted RBP17.17■□□□□ 0.34
COL9A1-208ENST00000489611 SRPRBQ9Y5M8 271 aaKnown RBP17.17■□□□□ 0.34
COL9A1-208ENST00000489611 UQCRHLA0A096LP55 91 aa17.17■□□□□ 0.34
COL9A1-208ENST00000489611 UQCRHP07919 91 aa17.17■□□□□ 0.34
COL9A1-208ENST00000489611 GUCY1A2P33402 732 aa17.17■□□□□ 0.34
COL9A1-208ENST00000489611 CRY2Q49AN0 593 aa17.17■□□□□ 0.34
COL9A1-208ENST00000489611 ZNF804AQ7Z570 1209 aa17.17■□□□□ 0.34
COL9A1-208ENST00000489611 CNNM3Q8NE01 707 aa17.17■□□□□ 0.34
COL9A1-208ENST00000489611 RPGRQ92834 1020 aaKnown RBP17.17■□□□□ 0.34
COL9A1-208ENST00000489611 MAP7D2Q96T17 732 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms