RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 FANCIQ9NVI1 1328 aa11.19□□□□□ -0.62
TNRC6B-208ENST00000489500 YDJCA8MPS7 323 aa11.19□□□□□ -0.62
TNRC6B-208ENST00000489500 H7C1W4 665 aa11.19□□□□□ -0.62
TNRC6B-208ENST00000489500 MYCP01106 439 aaPredicted RBP11.19□□□□□ -0.62
TNRC6B-208ENST00000489500 KCNJ4P48050 445 aa11.19□□□□□ -0.62
TNRC6B-208ENST00000489500 MMP14P50281 582 aa11.19□□□□□ -0.62
TNRC6B-208ENST00000489500 CENPCQ03188 943 aa11.19□□□□□ -0.62
TNRC6B-208ENST00000489500 SRSF11Q05519 484 aaKnown RBP11.19□□□□□ -0.62
TNRC6B-208ENST00000489500 VAC14Q08AM6 782 aa11.19□□□□□ -0.62
TNRC6B-208ENST00000489500 GRM1Q13255 1194 aa11.19□□□□□ -0.62
TNRC6B-208ENST00000489500 AGBL3Q8NEM8 1001 aa11.19□□□□□ -0.62
TNRC6B-208ENST00000489500 TTLL11Q8NHH1 800 aa11.19□□□□□ -0.62
TNRC6B-208ENST00000489500 JARID2Q92833 1246 aaPredicted RBP11.19□□□□□ -0.62
TNRC6B-208ENST00000489500 GTPBP3Q969Y2 492 aaKnown RBP11.19□□□□□ -0.62
TNRC6B-208ENST00000489500 GMCL1Q96IK5 515 aa11.19□□□□□ -0.62
TNRC6B-208ENST00000489500 ESYT1Q9BSJ8 1104 aa11.19□□□□□ -0.62
TNRC6B-208ENST00000489500 ZNF408Q9H9D4 720 aa11.19□□□□□ -0.62
TNRC6B-208ENST00000489500 GDPD2Q9HCC8 539 aa11.19□□□□□ -0.62
TNRC6B-208ENST00000489500 PRDM10Q9NQV6 1147 aa11.19□□□□□ -0.62
TNRC6B-208ENST00000489500 LEMD3Q9Y2U8 911 aa11.19□□□□□ -0.62
TNRC6B-208ENST00000489500 HRH3Q9Y5N1 445 aa11.19□□□□□ -0.62
TNRC6B-208ENST00000489500 RTL9Q8NET4 1388 aa11.18□□□□□ -0.62
TNRC6B-208ENST00000489500 USP17L3A6NCW0 530 aa11.18□□□□□ -0.62
TNRC6B-208ENST00000489500 USP17L4A6NCW7 530 aa11.18□□□□□ -0.62
TNRC6B-208ENST00000489500 VAMP4O75379 141 aa11.18□□□□□ -0.62
TNRC6B-208ENST00000489500 STAU1O95793 577 aaKnown RBP11.18□□□□□ -0.62
TNRC6B-208ENST00000489500 IGKV5-2P06315 115 aa11.18□□□□□ -0.62
TNRC6B-208ENST00000489500 VIL1P09327 827 aaKnown RBP11.18□□□□□ -0.62
TNRC6B-208ENST00000489500 MAP2K2P36507 400 aa11.18□□□□□ -0.62
TNRC6B-208ENST00000489500 EXOSC9Q06265 439 aaKnown RBP11.18□□□□□ -0.62
TNRC6B-208ENST00000489500 GCKRQ14397 625 aa11.18□□□□□ -0.62
TNRC6B-208ENST00000489500 CWF19L2Q2TBE0 894 aaKnown RBP11.18□□□□□ -0.62
TNRC6B-208ENST00000489500 TAS1R3Q7RTX0 852 aa11.18□□□□□ -0.62
TNRC6B-208ENST00000489500 USP17L1Q7RTZ2 530 aa11.18□□□□□ -0.62
TNRC6B-208ENST00000489500 SLC51AQ86UW1 340 aa11.18□□□□□ -0.62
TNRC6B-208ENST00000489500 OGFOD1Q8N543 542 aa11.18□□□□□ -0.62
TNRC6B-208ENST00000489500 C2orf69Q8N8R5 385 aa11.18□□□□□ -0.62
TNRC6B-208ENST00000489500 HHIPL1Q96JK4 782 aa11.18□□□□□ -0.62
TNRC6B-208ENST00000489500 CAPNS2Q96L46 248 aa11.18□□□□□ -0.62
TNRC6B-208ENST00000489500 GPR101Q96P66 508 aaPredicted RBP11.18□□□□□ -0.62
TNRC6B-208ENST00000489500 PLA2G12BQ9BX93 195 aa11.18□□□□□ -0.62
TNRC6B-208ENST00000489500 GLIS2Q9BZE0 524 aaPredicted RBP11.18□□□□□ -0.62
TNRC6B-208ENST00000489500 PRM3Q9NNZ6 103 aa11.18□□□□□ -0.62
TNRC6B-208ENST00000489500 TIMMDC1Q9NPL8 285 aa11.18□□□□□ -0.62
TNRC6B-208ENST00000489500 MYO3BQ8WXR4 1341 aa11.17□□□□□ -0.62
TNRC6B-208ENST00000489500 ANKRD18BA2A2Z9 1011 aa11.17□□□□□ -0.62
TNRC6B-208ENST00000489500 TRAF5O00463 557 aa11.17□□□□□ -0.62
TNRC6B-208ENST00000489500 PRKCSHP14314 528 aaPredicted RBP11.17□□□□□ -0.62
TNRC6B-208ENST00000489500 KIF4BQ2VIQ3 1234 aa11.17□□□□□ -0.62
TNRC6B-208ENST00000489500 TBC1D10BQ4KMP7 808 aaPredicted RBP11.17□□□□□ -0.62
TNRC6B-208ENST00000489500 KRT26Q7Z3Y9 468 aa11.17□□□□□ -0.62
TNRC6B-208ENST00000489500 XAGE2Q96GT9 111 aa11.17□□□□□ -0.62
TNRC6B-208ENST00000489500 GREM2Q9H772 168 aa11.17□□□□□ -0.62
TNRC6B-208ENST00000489500 CHMP3Q9Y3E7 222 aa11.17□□□□□ -0.62
TNRC6B-208ENST00000489500 MED23Q9ULK4 1368 aa11.16□□□□□ -0.62
TNRC6B-208ENST00000489500 FOXN1O15353 648 aa11.16□□□□□ -0.62
TNRC6B-208ENST00000489500 CA12O43570 354 aa11.16□□□□□ -0.62
TNRC6B-208ENST00000489500 PHKA2P46019 1235 aa11.16□□□□□ -0.62
TNRC6B-208ENST00000489500 CCT4P50991 539 aaKnown RBP11.16□□□□□ -0.62
TNRC6B-208ENST00000489500 IFIT5Q13325 482 aaKnown RBP11.16□□□□□ -0.62
TNRC6B-208ENST00000489500 TAF7LQ5H9L4 462 aa11.16□□□□□ -0.62
TNRC6B-208ENST00000489500 WDR44Q5JSH3 913 aa11.16□□□□□ -0.62
TNRC6B-208ENST00000489500 CST9Q5W186 159 aa11.16□□□□□ -0.62
TNRC6B-208ENST00000489500 G2E3Q7L622 706 aa11.16□□□□□ -0.62
TNRC6B-208ENST00000489500 USP48Q86UV5 1035 aa11.16□□□□□ -0.62
TNRC6B-208ENST00000489500 TRPM4Q8TD43 1214 aa11.16□□□□□ -0.62
TNRC6B-208ENST00000489500 COA1Q9GZY4 146 aa11.16□□□□□ -0.62
TNRC6B-208ENST00000489500 C9orf78Q9NZ63 289 aaPredicted RBP11.16□□□□□ -0.62
TNRC6B-208ENST00000489500 MINPP1Q9UNW1 487 aa11.16□□□□□ -0.62
TNRC6B-208ENST00000489500 DOLKQ9UPQ8 538 aa11.16□□□□□ -0.62
TNRC6B-208ENST00000489500 CELA2BP08218 269 aaPredicted RBP11.15□□□□□ -0.62
TNRC6B-208ENST00000489500 ABL2P42684 1182 aa11.15□□□□□ -0.62
TNRC6B-208ENST00000489500 HIRAP54198 1017 aaPredicted RBP11.15□□□□□ -0.62
TNRC6B-208ENST00000489500 CCDC57Q2TAC2 916 aa11.15□□□□□ -0.62
TNRC6B-208ENST00000489500 SLFNL1Q499Z3 407 aa11.15□□□□□ -0.62
TNRC6B-208ENST00000489500 CYP4F22Q6NT55 531 aa11.15□□□□□ -0.62
TNRC6B-208ENST00000489500 FOXR1Q6PIV2 292 aa11.15□□□□□ -0.62
TNRC6B-208ENST00000489500 SAPCD2Q86UD0 394 aa11.15□□□□□ -0.62
TNRC6B-208ENST00000489500 KCTD17Q8N5Z5 321 aa11.15□□□□□ -0.62
TNRC6B-208ENST00000489500 HDAC9Q9UKV0 1011 aa11.15□□□□□ -0.62
TNRC6B-208ENST00000489500 SCN9AQ15858 1988 aa11.15□□□□□ -0.62
TNRC6B-208ENST00000489500 ZNF804BA4D1E1 1349 aa11.14□□□□□ -0.63
TNRC6B-208ENST00000489500 AKAP11Q9UKA4 1901 aa11.14□□□□□ -0.63
TNRC6B-208ENST00000489500 F11P03951 625 aa11.14□□□□□ -0.63
TNRC6B-208ENST00000489500 CSF1RP07333 972 aa11.14□□□□□ -0.63
TNRC6B-208ENST00000489500 THBS1P07996 1170 aa11.14□□□□□ -0.63
TNRC6B-208ENST00000489500 NF2P35240 595 aa11.14□□□□□ -0.63
TNRC6B-208ENST00000489500 HUNKP57058 714 aa11.14□□□□□ -0.63
TNRC6B-208ENST00000489500 NOGQ13253 232 aa11.14□□□□□ -0.63
TNRC6B-208ENST00000489500 STRIP1Q5VSL9 837 aa11.14□□□□□ -0.63
TNRC6B-208ENST00000489500 RNF135Q8IUD6 432 aa11.14□□□□□ -0.63
TNRC6B-208ENST00000489500 ZSCAN10Q96SZ4 725 aaPredicted RBP11.14□□□□□ -0.63
TNRC6B-208ENST00000489500 GBA2Q9HCG7 927 aaPredicted RBP11.14□□□□□ -0.63
TNRC6B-208ENST00000489500 ZNF609O15014 1411 aa11.14□□□□□ -0.63
TNRC6B-208ENST00000489500 ALDH1L1O75891 902 aa11.13□□□□□ -0.63
TNRC6B-208ENST00000489500 GDF11O95390 407 aa11.13□□□□□ -0.63
TNRC6B-208ENST00000489500 LBX1P52954 281 aa11.13□□□□□ -0.63
TNRC6B-208ENST00000489500 FMR1Q06787 632 aaKnown RBP eCLIP11.13□□□□□ -0.63
TNRC6B-208ENST00000489500 SLC4A10Q6U841 1118 aa11.13□□□□□ -0.63
TNRC6B-208ENST00000489500 TMEM151AQ8N4L1 468 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms