RNA–Protein interactions for RNA: ENST00000489477.1

NDUFAF4-203, Transcript of NADH:ubiquinone oxidoreductase complex assembly factor 4, humanhuman

TSL 3

Gene NDUFAF4, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF4-203ENST00000489477 NHLH1Q02575 133 aa11.33□□□□□ -0.6
NDUFAF4-203ENST00000489477 ADGRE1Q14246 886 aa11.33□□□□□ -0.6
NDUFAF4-203ENST00000489477 RAB30Q15771 203 aa11.33□□□□□ -0.6
NDUFAF4-203ENST00000489477 CCL14Q16627 93 aa11.33□□□□□ -0.6
NDUFAF4-203ENST00000489477 GPR142Q7Z601 462 aa11.33□□□□□ -0.6
NDUFAF4-203ENST00000489477 STK31Q9BXU1 1019 aa11.33□□□□□ -0.6
NDUFAF4-203ENST00000489477 PBX4Q9BYU1 374 aa11.33□□□□□ -0.6
NDUFAF4-203ENST00000489477 DAGLAQ9Y4D2 1042 aa11.33□□□□□ -0.6
NDUFAF4-203ENST00000489477 PRRC2BQ5JSZ5 2229 aaKnown RBP11.33□□□□□ -0.6
NDUFAF4-203ENST00000489477 USP34Q70CQ2 3546 aa11.33□□□□□ -0.6
NDUFAF4-203ENST00000489477 MROH5Q6ZUA9 1318 aa11.33□□□□□ -0.6
NDUFAF4-203ENST00000489477 ZNF318Q5VUA4 2279 aa11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 RIOK3O14730 519 aaKnown RBP11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 ZNF853P0CG23 659 aa11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 RAG1P15918 1043 aa11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 CNGA1P29973 690 aa11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 HOXA7P31268 230 aaPredicted RBP11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 KCNQ1P51787 676 aa11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 EPHB4P54760 987 aa11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 HMGCS2P54868 508 aa11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 GNAI1P63096 354 aa11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 FOXO4P98177 505 aa11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 CALD1Q05682 793 aaKnown RBP11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 MAP2K5Q13163 448 aa11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 SH3D19Q5HYK7 790 aa11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 GJC2Q5T442 439 aaPredicted RBP11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 CCDC129Q6ZRS4 1044 aa11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 SH3RF1Q7Z6J0 888 aa11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 PLEKHH3Q7Z736 793 aa11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 LINS1Q8NG48 757 aa11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 WDR66Q8TBY9 1149 aa11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 IDI2Q9BXS1 227 aa11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 IFT57Q9NWB7 429 aa11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 COG5Q9UP83 839 aa11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 IQSEC3Q9UPP2 1182 aaPredicted RBP11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 BRWD1Q9NSI6 2320 aa11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 KIF16BQ96L93 1317 aa11.32□□□□□ -0.6
NDUFAF4-203ENST00000489477 ZNF236Q9UL36 1845 aa11.31□□□□□ -0.6
NDUFAF4-203ENST00000489477 PI4K2BG5E9Z4 385 aa11.31□□□□□ -0.6
NDUFAF4-203ENST00000489477 ELL2O00472 640 aaPredicted RBP11.31□□□□□ -0.6
NDUFAF4-203ENST00000489477 PITPNM1O00562 1244 aa11.31□□□□□ -0.6
NDUFAF4-203ENST00000489477 CHRM1P11229 460 aaPredicted RBP11.31□□□□□ -0.6
NDUFAF4-203ENST00000489477 HERVK_113P62684 666 aa11.31□□□□□ -0.6
NDUFAF4-203ENST00000489477 ERVK-9P63128 1117 aa11.31□□□□□ -0.6
NDUFAF4-203ENST00000489477 ERVK-24P63145 666 aa11.31□□□□□ -0.6
NDUFAF4-203ENST00000489477 TFF2Q03403 129 aa11.31□□□□□ -0.6
NDUFAF4-203ENST00000489477 TLE2Q04725 743 aa11.31□□□□□ -0.6
NDUFAF4-203ENST00000489477 SPP2Q13103 211 aa11.31□□□□□ -0.6
NDUFAF4-203ENST00000489477 ZSCAN29Q8IWY8 852 aaPredicted RBP11.31□□□□□ -0.6
NDUFAF4-203ENST00000489477 EDC3Q96F86 508 aaKnown RBP11.31□□□□□ -0.6
NDUFAF4-203ENST00000489477 OSBPL5Q9H0X9 879 aaPredicted RBP11.31□□□□□ -0.6
NDUFAF4-203ENST00000489477 AS3MTQ9HBK9 375 aa11.31□□□□□ -0.6
NDUFAF4-203ENST00000489477 CWC22Q9HCG8 908 aaKnown RBP11.31□□□□□ -0.6
NDUFAF4-203ENST00000489477 MSRAQ9UJ68 235 aa11.31□□□□□ -0.6
NDUFAF4-203ENST00000489477 RFX7Q2KHR2 1363 aa11.3□□□□□ -0.6
NDUFAF4-203ENST00000489477 FAM86C2PA6NEL3 165 aa11.3□□□□□ -0.6
NDUFAF4-203ENST00000489477 TBC1D12O60347 775 aa11.3□□□□□ -0.6
NDUFAF4-203ENST00000489477 ZEB1P37275 1124 aaPredicted RBP11.3□□□□□ -0.6
NDUFAF4-203ENST00000489477 RGS3P49796 1198 aa11.3□□□□□ -0.6
NDUFAF4-203ENST00000489477 CCNA1P78396 465 aa11.3□□□□□ -0.6
NDUFAF4-203ENST00000489477 LMBR1LQ6UX01 489 aa11.3□□□□□ -0.6
NDUFAF4-203ENST00000489477 ZNF594Q96JF6 807 aaPredicted RBP11.3□□□□□ -0.6
NDUFAF4-203ENST00000489477 TSHZ2Q9NRE2 1034 aa11.3□□□□□ -0.6
NDUFAF4-203ENST00000489477 USP40Q9NVE5 1235 aa11.3□□□□□ -0.6
NDUFAF4-203ENST00000489477 HOXC6P09630 235 aa11.29□□□□□ -0.6
NDUFAF4-203ENST00000489477 CYBAP13498 195 aa11.29□□□□□ -0.6
NDUFAF4-203ENST00000489477 ITGB8P26012 769 aa11.29□□□□□ -0.6
NDUFAF4-203ENST00000489477 ATP2B2Q01814 1243 aa11.29□□□□□ -0.6
NDUFAF4-203ENST00000489477 RASIP1Q5U651 963 aa11.29□□□□□ -0.6
NDUFAF4-203ENST00000489477 ZFPM1Q8IX07 1006 aa11.29□□□□□ -0.6
NDUFAF4-203ENST00000489477 RASEFQ8IZ41 740 aa11.29□□□□□ -0.6
NDUFAF4-203ENST00000489477 RUNDC1Q96C34 613 aa11.29□□□□□ -0.6
NDUFAF4-203ENST00000489477 SLC28A3Q9HAS3 691 aa11.29□□□□□ -0.6
NDUFAF4-203ENST00000489477 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.29□□□□□ -0.6
NDUFAF4-203ENST00000489477 TXNRD2Q9NNW7 524 aa11.29□□□□□ -0.6
NDUFAF4-203ENST00000489477 SLC15A5A6NIM6 579 aa11.28□□□□□ -0.6
NDUFAF4-203ENST00000489477 USP17L5A8MUK1 530 aa11.28□□□□□ -0.6
NDUFAF4-203ENST00000489477 TLL1O43897 1013 aa11.28□□□□□ -0.6
NDUFAF4-203ENST00000489477 ST18O60284 1047 aa11.28□□□□□ -0.6
NDUFAF4-203ENST00000489477 PBX2P40425 430 aa11.28□□□□□ -0.6
NDUFAF4-203ENST00000489477 ADCYAP1R1P41586 468 aa11.28□□□□□ -0.6
NDUFAF4-203ENST00000489477 PPIGQ13427 754 aaKnown RBP eCLIP11.28□□□□□ -0.6
NDUFAF4-203ENST00000489477 DIXDC1Q155Q3 683 aa11.28□□□□□ -0.6
NDUFAF4-203ENST00000489477 C8orf58Q8NAV2 365 aa11.28□□□□□ -0.6
NDUFAF4-203ENST00000489477 PORCNQ9H237 461 aa11.28□□□□□ -0.6
NDUFAF4-203ENST00000489477 TMOD4Q9NZQ9 345 aa11.28□□□□□ -0.6
NDUFAF4-203ENST00000489477 RBPJLQ9UBG7 517 aa11.28□□□□□ -0.6
NDUFAF4-203ENST00000489477 A0A0G2JMZ2 1700 aa11.27□□□□□ -0.61
NDUFAF4-203ENST00000489477 SMCHD1A6NHR9 2005 aa11.27□□□□□ -0.61
NDUFAF4-203ENST00000489477 SEPT4O43236 478 aa11.27□□□□□ -0.61
NDUFAF4-203ENST00000489477 SKIV2LQ15477 1246 aaKnown RBP11.27□□□□□ -0.61
NDUFAF4-203ENST00000489477 PSRC1Q6PGN9 363 aaPredicted RBP11.27□□□□□ -0.61
NDUFAF4-203ENST00000489477 CCDC84Q86UT8 332 aaPredicted RBP11.27□□□□□ -0.61
NDUFAF4-203ENST00000489477 DNAAF4Q8WXU2 420 aa11.27□□□□□ -0.61
NDUFAF4-203ENST00000489477 TOX2Q96NM4 488 aa11.27□□□□□ -0.61
NDUFAF4-203ENST00000489477 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.27□□□□□ -0.615e-6■■□□□ 14
NDUFAF4-203ENST00000489477 MTIF3Q9H2K0 278 aaKnown RBP11.27□□□□□ -0.61
NDUFAF4-203ENST00000489477 TMEM39AQ9NV64 488 aa11.27□□□□□ -0.61
NDUFAF4-203ENST00000489477 FLRT1Q9NZU1 646 aa11.27□□□□□ -0.61
NDUFAF4-203ENST00000489477 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms