RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 MAP2K5Q13163 448 aa11.52□□□□□ -0.57
COL17A1-207ENST00000488320 MTMR2Q13614 643 aa11.52□□□□□ -0.57
COL17A1-207ENST00000488320 MORN1Q5T089 497 aa11.52□□□□□ -0.57
COL17A1-207ENST00000488320 WDR63Q8IWG1 891 aa11.52□□□□□ -0.57
COL17A1-207ENST00000488320 PPM1EQ8WY54 764 aa11.52□□□□□ -0.57
COL17A1-207ENST00000488320 LPAR1Q92633 364 aa11.52□□□□□ -0.57
COL17A1-207ENST00000488320 USP6NLQ92738 828 aa11.52□□□□□ -0.57
COL17A1-207ENST00000488320 FAM163AQ96GL9 167 aaPredicted RBP11.52□□□□□ -0.57
COL17A1-207ENST00000488320 SIL1Q9H173 461 aa11.52□□□□□ -0.57
COL17A1-207ENST00000488320 PORCNQ9H237 461 aa11.52□□□□□ -0.57
COL17A1-207ENST00000488320 RBPJLQ9UBG7 517 aa11.52□□□□□ -0.57
COL17A1-207ENST00000488320 DDX20Q9UHI6 824 aaKnown RBP11.52□□□□□ -0.57
COL17A1-207ENST00000488320 DNAH12Q6ZR08 3092 aa11.51□□□□□ -0.57
COL17A1-207ENST00000488320 C19orf81C9J6K1 198 aa11.51□□□□□ -0.57
COL17A1-207ENST00000488320 DNM1LO00429 736 aa11.51□□□□□ -0.57
COL17A1-207ENST00000488320 GJC2Q5T442 439 aaPredicted RBP11.51□□□□□ -0.57
COL17A1-207ENST00000488320 SLC39A5Q6ZMH5 540 aa11.51□□□□□ -0.57
COL17A1-207ENST00000488320 ERICH6Q7L0X2 663 aa11.51□□□□□ -0.57
COL17A1-207ENST00000488320 ARRDC4Q8NCT1 418 aa11.51□□□□□ -0.57
COL17A1-207ENST00000488320 GTF3C2Q8WUA4 911 aaPredicted RBP11.51□□□□□ -0.57
COL17A1-207ENST00000488320 WDR18Q9BV38 432 aa11.51□□□□□ -0.57
COL17A1-207ENST00000488320 NDUFB9Q9Y6M9 179 aa11.51□□□□□ -0.57
COL17A1-207ENST00000488320 MROH7-TTC4A0A0A0MT08 1334 aa11.51□□□□□ -0.57
COL17A1-207ENST00000488320 MAST2Q6P0Q8 1798 aa11.51□□□□□ -0.57
COL17A1-207ENST00000488320 FRMPD3Q5JV73 1810 aa11.51□□□□□ -0.57
COL17A1-207ENST00000488320 GPR75-ASB3A0A0A6YYF3 556 aa11.5□□□□□ -0.57
COL17A1-207ENST00000488320 USP17L10C9JJH3 530 aa11.5□□□□□ -0.57
COL17A1-207ENST00000488320 KBTBD13C9JR72 458 aa11.5□□□□□ -0.57
COL17A1-207ENST00000488320 LDHCP07864 332 aa11.5□□□□□ -0.57
COL17A1-207ENST00000488320 RRP1BQ14684 758 aaKnown RBP11.5□□□□□ -0.57
COL17A1-207ENST00000488320 CCDC102BQ68D86 513 aa11.5□□□□□ -0.57
COL17A1-207ENST00000488320 ATG9AQ7Z3C6 839 aa11.5□□□□□ -0.57
COL17A1-207ENST00000488320 RNPC3Q96LT9 517 aaKnown RBP11.5□□□□□ -0.57
COL17A1-207ENST00000488320 TRIM34Q9BYJ4 488 aa11.5□□□□□ -0.57
COL17A1-207ENST00000488320 RFX7Q2KHR2 1363 aa11.5□□□□□ -0.57
COL17A1-207ENST00000488320 LTBP2Q14767 1821 aa11.49□□□□□ -0.57
COL17A1-207ENST00000488320 NPM3O75607 178 aaKnown RBP11.49□□□□□ -0.57
COL17A1-207ENST00000488320 ASNSP08243 561 aa11.49□□□□□ -0.57
COL17A1-207ENST00000488320 RFX5P48382 616 aaPredicted RBP11.49□□□□□ -0.57
COL17A1-207ENST00000488320 RHBDL3P58872 404 aa11.49□□□□□ -0.57
COL17A1-207ENST00000488320 CCNA1P78396 465 aa11.49□□□□□ -0.57
COL17A1-207ENST00000488320 GSTO1P78417 241 aa11.49□□□□□ -0.57
COL17A1-207ENST00000488320 MECOMQ03112 1051 aa11.49□□□□□ -0.57
COL17A1-207ENST00000488320 GRIN2CQ14957 1233 aa11.49□□□□□ -0.57
COL17A1-207ENST00000488320 USP38Q8NB14 1042 aa11.49□□□□□ -0.57
COL17A1-207ENST00000488320 IL27Q8NEV9 243 aa11.49□□□□□ -0.57
COL17A1-207ENST00000488320 FLRT1Q9NZU1 646 aa11.49□□□□□ -0.57
COL17A1-207ENST00000488320 HERC5Q9UII4 1024 aaKnown RBP11.49□□□□□ -0.57
COL17A1-207ENST00000488320 IVNS1ABPQ9Y6Y0 642 aa11.49□□□□□ -0.57
COL17A1-207ENST00000488320 CDH23Q9H251 3354 aa11.49□□□□□ -0.57
COL17A1-207ENST00000488320 SLC15A5A6NIM6 579 aa11.48□□□□□ -0.57
COL17A1-207ENST00000488320 MAP4K4O95819 1239 aaPredicted RBP11.48□□□□□ -0.57
COL17A1-207ENST00000488320 ADORA1P30542 326 aa11.48□□□□□ -0.57
COL17A1-207ENST00000488320 CYP2C19P33261 490 aa11.48□□□□□ -0.57
COL17A1-207ENST00000488320 MAP3K12Q12852 859 aa11.48□□□□□ -0.57
COL17A1-207ENST00000488320 TRIM60Q495X7 471 aa11.48□□□□□ -0.57
COL17A1-207ENST00000488320 ANO1Q5XXA6 986 aa11.48□□□□□ -0.57
COL17A1-207ENST00000488320 TEX11Q8IYF3 940 aa11.48□□□□□ -0.57
COL17A1-207ENST00000488320 USP44Q9H0E7 712 aa11.48□□□□□ -0.57
COL17A1-207ENST00000488320 PI4KBQ9UBF8 816 aa11.48□□□□□ -0.57
COL17A1-207ENST00000488320 CIAO1O76071 339 aa11.47□□□□□ -0.57
COL17A1-207ENST00000488320 PTPREP23469 700 aa11.47□□□□□ -0.57
COL17A1-207ENST00000488320 IL15P40933 162 aaPredicted RBP11.47□□□□□ -0.57
COL17A1-207ENST00000488320 TIMM10P62072 90 aa11.47□□□□□ -0.57
COL17A1-207ENST00000488320 RASGRF1Q13972 1273 aa11.47□□□□□ -0.57
COL17A1-207ENST00000488320 USP17L2Q6R6M4 530 aa11.47□□□□□ -0.57
COL17A1-207ENST00000488320 SH3RF1Q7Z6J0 888 aa11.47□□□□□ -0.57
COL17A1-207ENST00000488320 DPP9Q86TI2 863 aa11.47□□□□□ -0.57
COL17A1-207ENST00000488320 CRACR2BQ8N4Y2 399 aaPredicted RBP11.47□□□□□ -0.57
COL17A1-207ENST00000488320 ATXN2LQ8WWM7 1075 aaKnown RBP11.47□□□□□ -0.57
COL17A1-207ENST00000488320 FERMT2Q96AC1 680 aa11.47□□□□□ -0.57
COL17A1-207ENST00000488320 GAS2L1Q99501 681 aaPredicted RBP11.47□□□□□ -0.57
COL17A1-207ENST00000488320 NOL10Q9BSC4 688 aaKnown RBP11.47□□□□□ -0.57
COL17A1-207ENST00000488320 PDLIM7Q9NR12 457 aa11.47□□□□□ -0.57
COL17A1-207ENST00000488320 FBXO3Q9UK99 471 aa11.47□□□□□ -0.57
COL17A1-207ENST00000488320 RABGAP1Q9Y3P9 1069 aa11.47□□□□□ -0.57
COL17A1-207ENST00000488320 RLFQ13129 1914 aa11.47□□□□□ -0.57
COL17A1-207ENST00000488320 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.46□□□□□ -0.57
COL17A1-207ENST00000488320 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.46□□□□□ -0.57
COL17A1-207ENST00000488320 TRIM43BA6NCK2 446 aa11.46□□□□□ -0.57
COL17A1-207ENST00000488320 GDF11O95390 407 aa11.46□□□□□ -0.57
COL17A1-207ENST00000488320 RAG1P15918 1043 aa11.46□□□□□ -0.57
COL17A1-207ENST00000488320 ADCYAP1R1P41586 468 aa11.46□□□□□ -0.57
COL17A1-207ENST00000488320 TRPV1Q8NER1 839 aa11.46□□□□□ -0.57
COL17A1-207ENST00000488320 NPLOC4Q8TAT6 608 aa11.46□□□□□ -0.57
COL17A1-207ENST00000488320 ADAMTS19Q8TE59 1207 aa11.46□□□□□ -0.57
COL17A1-207ENST00000488320 TRIM43Q96BQ3 446 aaPredicted RBP11.46□□□□□ -0.57
COL17A1-207ENST00000488320 UHRF1Q96T88 793 aaPredicted RBP11.46□□□□□ -0.57
COL17A1-207ENST00000488320 DHX36Q9H2U1 1008 aaKnown RBP11.46□□□□□ -0.57
COL17A1-207ENST00000488320 ZNF576Q9H609 170 aa11.46□□□□□ -0.57
COL17A1-207ENST00000488320 EMILIN3Q9NT22 766 aa11.46□□□□□ -0.57
COL17A1-207ENST00000488320 RAI14Q9P0K7 980 aa11.46□□□□□ -0.57
COL17A1-207ENST00000488320 TACC3Q9Y6A5 838 aa11.46□□□□□ -0.57
COL17A1-207ENST00000488320 TTC28Q96AY4 2481 aa11.46□□□□□ -0.58
COL17A1-207ENST00000488320 MUC3AQ02505 3323 aa11.45□□□□□ -0.58
COL17A1-207ENST00000488320 USP17L15C9J2P7 530 aa11.45□□□□□ -0.58
COL17A1-207ENST00000488320 USP17L13C9JLJ4 530 aa11.45□□□□□ -0.58
COL17A1-207ENST00000488320 USP17L11C9JVI0 530 aa11.45□□□□□ -0.58
COL17A1-207ENST00000488320 USP17L18D6R9N7 530 aa11.45□□□□□ -0.58
COL17A1-207ENST00000488320 USP17L22D6RA61 530 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms