RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 PDE6AP16499 860 aa23.48■■□□□ 1.35
CD55-209ENST00000488171 MTMR2Q13614 643 aa23.48■■□□□ 1.35
CD55-209ENST00000488171 SLC9C2Q5TAH2 1124 aa23.48■■□□□ 1.35
CD55-209ENST00000488171 PRPF38BQ5VTL8 546 aaKnown RBP23.48■■□□□ 1.35
CD55-209ENST00000488171 ANKRD13CQ8N6S4 541 aa23.48■■□□□ 1.35
CD55-209ENST00000488171 DNAJC2Q99543 621 aaKnown RBP23.48■■□□□ 1.35
CD55-209ENST00000488171 GINM1Q9NU53 330 aa23.48■■□□□ 1.35
CD55-209ENST00000488171 ZBTB21Q9ULJ3 1066 aa23.48■■□□□ 1.35
CD55-209ENST00000488171 GABRQQ9UN88 632 aa23.48■■□□□ 1.35
CD55-209ENST00000488171 GRK4P32298 578 aa23.47■■□□□ 1.35
CD55-209ENST00000488171 BACE1P56817 501 aa23.47■■□□□ 1.35
CD55-209ENST00000488171 EDC3Q96F86 508 aaKnown RBP23.47■■□□□ 1.35
CD55-209ENST00000488171 MAGEB6P1A0A0J9YX57 407 aa23.46■■□□□ 1.35
CD55-209ENST00000488171 TCRBV5S4A2TA0A5A2 114 aa23.46■■□□□ 1.35
CD55-209ENST00000488171 MTFR1Q15390 333 aa23.46■■□□□ 1.35
CD55-209ENST00000488171 ASCC2Q9H1I8 757 aaPredicted RBP23.46■■□□□ 1.35
CD55-209ENST00000488171 EHD4Q9H223 541 aa23.46■■□□□ 1.35
CD55-209ENST00000488171 PABPC4Q13310 644 aaKnown RBP eCLIP23.45■■□□□ 1.344e-9■■■■□ 23.2
CD55-209ENST00000488171 FAM110CQ1W6H9 321 aa23.45■■□□□ 1.34
CD55-209ENST00000488171 TATDN1Q6P1N9 297 aa23.45■■□□□ 1.34
CD55-209ENST00000488171 SERPINB13Q9UIV8 391 aa23.45■■□□□ 1.34
CD55-209ENST00000488171 ZNF532Q9HCE3 1301 aa23.45■■□□□ 1.34
CD55-209ENST00000488171 NAV1Q8NEY1 1877 aa23.44■■□□□ 1.34
CD55-209ENST00000488171 ATP5JP18859 108 aa23.44■■□□□ 1.34
CD55-209ENST00000488171 GCLCP48506 637 aaPredicted RBP23.44■■□□□ 1.34
CD55-209ENST00000488171 BOLA2Q9H3K6 86 aa23.44■■□□□ 1.34
CD55-209ENST00000488171 USP17L10C9JJH3 530 aa23.43■■□□□ 1.34
CD55-209ENST00000488171 TNPO2O14787 897 aaKnown RBP23.43■■□□□ 1.34
CD55-209ENST00000488171 GH2P01242 217 aa23.43■■□□□ 1.34
CD55-209ENST00000488171 FLT3LGP49771 235 aa23.43■■□□□ 1.34
CD55-209ENST00000488171 PLCD1P51178 756 aa23.43■■□□□ 1.34
CD55-209ENST00000488171 TTC6Q86TZ1 520 aa23.43■■□□□ 1.34
CD55-209ENST00000488171 PAG1Q9NWQ8 432 aa23.43■■□□□ 1.34
CD55-209ENST00000488171 C19orf81C9J6K1 198 aa23.42■■□□□ 1.34
CD55-209ENST00000488171 HOXA7P31268 230 aaPredicted RBP23.42■■□□□ 1.34
CD55-209ENST00000488171 LRRCC1Q9C099 1032 aa23.42■■□□□ 1.34
CD55-209ENST00000488171 TMOD4Q9NZQ9 345 aa23.42■■□□□ 1.34
CD55-209ENST00000488171 SMARCA5O60264 1052 aaPredicted RBP23.41■■□□□ 1.34
CD55-209ENST00000488171 LCORLQ8N3X6 602 aa23.41■■□□□ 1.34
CD55-209ENST00000488171 SLAIN1Q8ND83 568 aa23.41■■□□□ 1.34
CD55-209ENST00000488171 HAUS7Q99871 368 aa23.41■■□□□ 1.34
CD55-209ENST00000488171 CRNKL1Q9BZJ0 848 aaKnown RBP23.41■■□□□ 1.34
CD55-209ENST00000488171 SHMT1P34896 483 aa23.4■■□□□ 1.34
CD55-209ENST00000488171 SLFNL1Q499Z3 407 aa23.4■■□□□ 1.34
CD55-209ENST00000488171 EMILIN3Q9NT22 766 aa23.4■■□□□ 1.34
CD55-209ENST00000488171 ADCY3O60266 1144 aa23.4■■□□□ 1.34
CD55-209ENST00000488171 CCL5P13501 91 aa23.4■■□□□ 1.34
CD55-209ENST00000488171 ADD2P35612 726 aa23.4■■□□□ 1.34
CD55-209ENST00000488171 IRX3P78415 501 aaPredicted RBP23.4■■□□□ 1.34
CD55-209ENST00000488171 EVX2Q03828 476 aa23.4■■□□□ 1.34
CD55-209ENST00000488171 GABPAQ06546 454 aa23.4■■□□□ 1.34
CD55-209ENST00000488171 IRF5Q13568 498 aa23.4■■□□□ 1.34
CD55-209ENST00000488171 CERKLQ49MI3 558 aaPredicted RBP23.4■■□□□ 1.34
CD55-209ENST00000488171 SDR42E1Q8WUS8 393 aa23.4■■□□□ 1.34
CD55-209ENST00000488171 COA7Q96BR5 231 aa23.4■■□□□ 1.34
CD55-209ENST00000488171 SHISA4Q96DD7 197 aa23.4■■□□□ 1.34
CD55-209ENST00000488171 P2RX7Q99572 595 aaKnown RBP23.4■■□□□ 1.34
CD55-209ENST00000488171 MORF4L1Q9UBU8 362 aa23.4■■□□□ 1.34
CD55-209ENST00000488171 BIN2Q9UBW5 565 aaPredicted RBP23.4■■□□□ 1.34
CD55-209ENST00000488171 POLR3DP05423 398 aaPredicted RBP23.39■■□□□ 1.33
CD55-209ENST00000488171 ELNP15502 786 aa23.39■■□□□ 1.33
CD55-209ENST00000488171 UBXN2AP68543 259 aa23.39■■□□□ 1.33
CD55-209ENST00000488171 PXYLP1Q8TE99 480 aa23.39■■□□□ 1.33
CD55-209ENST00000488171 DCP1AQ9NPI6 582 aaPredicted RBP23.39■■□□□ 1.33
CD55-209ENST00000488171 DOCK3Q8IZD9 2030 aa23.38■■□□□ 1.33
CD55-209ENST00000488171 CHGBP05060 677 aa23.38■■□□□ 1.33
CD55-209ENST00000488171 ABCB5Q2M3G0 1257 aa23.38■■□□□ 1.33
CD55-209ENST00000488171 USP17L2Q6R6M4 530 aa23.38■■□□□ 1.33
CD55-209ENST00000488171 ARMT1Q9H993 441 aa23.38■■□□□ 1.33
CD55-209ENST00000488171 MCM9Q9NXL9 1143 aa23.38■■□□□ 1.33
CD55-209ENST00000488171 PEX10O60683 326 aa23.37■■□□□ 1.33
CD55-209ENST00000488171 GJB1P08034 283 aa23.37■■□□□ 1.33
CD55-209ENST00000488171 HERVK_113P62684 666 aa23.37■■□□□ 1.33
CD55-209ENST00000488171 RAB3GAP1Q15042 981 aa23.37■■□□□ 1.33
CD55-209ENST00000488171 C12orf42Q96LP6 360 aa23.37■■□□□ 1.33
CD55-209ENST00000488171 RNF208Q9H0X6 261 aa23.37■■□□□ 1.33
CD55-209ENST00000488171 DCTPP1Q9H773 170 aa23.37■■□□□ 1.33
CD55-209ENST00000488171 MYH7P12883 1935 aa23.36■■□□□ 1.33
CD55-209ENST00000488171 MBD4O95243 580 aa23.36■■□□□ 1.33
CD55-209ENST00000488171 SLC34A2O95436 690 aa23.36■■□□□ 1.33
CD55-209ENST00000488171 GUCY1A2P33402 732 aa23.36■■□□□ 1.33
CD55-209ENST00000488171 GJA8P48165 433 aa23.36■■□□□ 1.33
CD55-209ENST00000488171 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.36■■□□□ 1.33
CD55-209ENST00000488171 TXNRD2Q9NNW7 524 aa23.36■■□□□ 1.33
CD55-209ENST00000488171 PRKAB2O43741 272 aa23.35■■□□□ 1.33
CD55-209ENST00000488171 INHAP05111 366 aa23.35■■□□□ 1.33
CD55-209ENST00000488171 CYP2D6P10635 497 aa23.35■■□□□ 1.33
CD55-209ENST00000488171 ZYXQ15942 572 aaKnown RBP23.35■■□□□ 1.33
CD55-209ENST00000488171 POTEEQ6S8J3 1075 aa23.35■■□□□ 1.33
CD55-209ENST00000488171 ACER1Q8TDN7 264 aa23.35■■□□□ 1.33
CD55-209ENST00000488171 UNC93B1Q9H1C4 597 aa23.35■■□□□ 1.33
CD55-209ENST00000488171 CABP5Q9NP86 173 aa23.35■■□□□ 1.33
CD55-209ENST00000488171 GJD2Q9UKL4 321 aa23.35■■□□□ 1.33
CD55-209ENST00000488171 PLXNB2O15031 1838 aa23.35■■□□□ 1.33
CD55-209ENST00000488171 UBE3CQ15386 1083 aa23.34■■□□□ 1.33
CD55-209ENST00000488171 NKX2-3Q8TAU0 364 aa23.34■■□□□ 1.33
CD55-209ENST00000488171 FEZ1Q99689 392 aa23.34■■□□□ 1.33
CD55-209ENST00000488171 KIAA1683Q9H0B3 1180 aa23.34■■□□□ 1.33
CD55-209ENST00000488171 ECHDC1Q9NTX5 307 aa23.34■■□□□ 1.33
CD55-209ENST00000488171 RBPJLQ9UBG7 517 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms