RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 FAM13CQ8NE31 585 aa6.13□□□□□ -1.43
ECHDC1-217ENST00000488087 GIMAP7Q8NHV1 300 aa6.13□□□□□ -1.43
ECHDC1-217ENST00000488087 CPLX3Q8WVH0 158 aa6.13□□□□□ -1.43
ECHDC1-217ENST00000488087 ACSF2Q96CM8 615 aaPredicted RBP6.13□□□□□ -1.43
ECHDC1-217ENST00000488087 SEC16BQ96JE7 1060 aa6.13□□□□□ -1.43
ECHDC1-217ENST00000488087 TMEM87BQ96K49 555 aa6.13□□□□□ -1.43
ECHDC1-217ENST00000488087 TBC1D32Q96NH3 1257 aa6.13□□□□□ -1.43
ECHDC1-217ENST00000488087 CRBNQ96SW2 442 aa6.13□□□□□ -1.43
ECHDC1-217ENST00000488087 DPH2Q9BQC3 489 aaPredicted RBP6.13□□□□□ -1.43
ECHDC1-217ENST00000488087 TJP2Q9UDY2 1190 aa6.13□□□□□ -1.43
ECHDC1-217ENST00000488087 PPT2Q9UMR5 302 aa6.13□□□□□ -1.43
ECHDC1-217ENST00000488087 PRR36Q9H6K5 1346 aa6.13□□□□□ -1.43
ECHDC1-217ENST00000488087 IMPDH2P12268 514 aa6.12□□□□□ -1.43
ECHDC1-217ENST00000488087 ATF4P18848 351 aaPredicted RBP6.12□□□□□ -1.43
ECHDC1-217ENST00000488087 ITGB7P26010 798 aa6.12□□□□□ -1.43
ECHDC1-217ENST00000488087 SOX9P48436 509 aa6.12□□□□□ -1.43
ECHDC1-217ENST00000488087 YARSP54577 528 aaKnown RBP6.12□□□□□ -1.43
ECHDC1-217ENST00000488087 SLBPQ14493 270 aaKnown RBP eCLIP6.12□□□□□ -1.43
ECHDC1-217ENST00000488087 TMEM201Q5SNT2 666 aa6.12□□□□□ -1.43
ECHDC1-217ENST00000488087 PRAMEF13Q5VWM6 474 aa6.12□□□□□ -1.43
ECHDC1-217ENST00000488087 SLC6A19Q695T7 634 aa6.12□□□□□ -1.43
ECHDC1-217ENST00000488087 ARMCX6Q7L4S7 300 aa6.12□□□□□ -1.43
ECHDC1-217ENST00000488087 MCATQ8IVS2 390 aaKnown RBP6.12□□□□□ -1.43
ECHDC1-217ENST00000488087 FBXL6Q8N531 539 aa6.12□□□□□ -1.43
ECHDC1-217ENST00000488087 SLC43A3Q8NBI5 491 aa6.12□□□□□ -1.43
ECHDC1-217ENST00000488087 XAGE3Q8WTP9 111 aa6.12□□□□□ -1.43
ECHDC1-217ENST00000488087 MFSD14AQ96MC6 490 aa6.12□□□□□ -1.43
ECHDC1-217ENST00000488087 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.12□□□□□ -1.43
ECHDC1-217ENST00000488087 FOXQ1Q9C009 403 aa6.12□□□□□ -1.43
ECHDC1-217ENST00000488087 EHMT1Q9H9B1 1298 aa6.12□□□□□ -1.43
ECHDC1-217ENST00000488087 PRKAG2Q9UGJ0 569 aa6.12□□□□□ -1.43
ECHDC1-217ENST00000488087 UPK3BL1B0FP48 263 aa6.11□□□□□ -1.43
ECHDC1-217ENST00000488087 UPK3BL2E5RIL1 263 aa6.11□□□□□ -1.43
ECHDC1-217ENST00000488087 LRIG2O94898 1065 aa6.11□□□□□ -1.43
ECHDC1-217ENST00000488087 ATE1O95260 518 aa6.11□□□□□ -1.43
ECHDC1-217ENST00000488087 SSBP05455 408 aaKnown RBP eCLIP6.11□□□□□ -1.43
ECHDC1-217ENST00000488087 RSPO4Q2I0M5 234 aaPredicted RBP6.11□□□□□ -1.43
ECHDC1-217ENST00000488087 RNF43Q68DV7 783 aa6.11□□□□□ -1.43
ECHDC1-217ENST00000488087 MRPL41Q8IXM3 137 aaKnown RBP6.11□□□□□ -1.43
ECHDC1-217ENST00000488087 SRRTQ9BXP5 876 aaKnown RBP6.11□□□□□ -1.43
ECHDC1-217ENST00000488087 C1GALT1Q9NS00 363 aa6.11□□□□□ -1.43
ECHDC1-217ENST00000488087 GSC2O15499 205 aa6.1□□□□□ -1.43
ECHDC1-217ENST00000488087 DYRK3O43781 588 aa6.1□□□□□ -1.43
ECHDC1-217ENST00000488087 FSTP19883 344 aa6.1□□□□□ -1.43
ECHDC1-217ENST00000488087 EIF6P56537 245 aaKnown RBP6.1□□□□□ -1.43
ECHDC1-217ENST00000488087 NFIAQ12857 509 aa6.1□□□□□ -1.43
ECHDC1-217ENST00000488087 LRRFIP1Q32MZ4 808 aaKnown RBP6.1□□□□□ -1.43
ECHDC1-217ENST00000488087 ARSHQ5FYA8 562 aa6.1□□□□□ -1.43
ECHDC1-217ENST00000488087 NKAPLQ5M9Q1 402 aa6.1□□□□□ -1.43
ECHDC1-217ENST00000488087 SEZ6L2Q6UXD5 910 aa6.1□□□□□ -1.43
ECHDC1-217ENST00000488087 PHACTR4Q8IZ21 702 aa6.1□□□□□ -1.43
ECHDC1-217ENST00000488087 TOP6BLQ8N6T0 577 aa6.1□□□□□ -1.43
ECHDC1-217ENST00000488087 MFSD2AQ8NA29 543 aa6.1□□□□□ -1.43
ECHDC1-217ENST00000488087 MIPEPQ99797 713 aa6.1□□□□□ -1.43
ECHDC1-217ENST00000488087 DBNDD2Q9BQY9 259 aa6.1□□□□□ -1.43
ECHDC1-217ENST00000488087 PRDM10Q9NQV6 1147 aa6.1□□□□□ -1.43
ECHDC1-217ENST00000488087 GMIPQ9P107 970 aa6.1□□□□□ -1.43
ECHDC1-217ENST00000488087 ZNRF3Q9ULT6 936 aa6.1□□□□□ -1.43
ECHDC1-217ENST00000488087 SLC22A31A6NKX4 558 aa6.09□□□□□ -1.43
ECHDC1-217ENST00000488087 CHURC1-FNTBB4DL54 471 aa6.09□□□□□ -1.43
ECHDC1-217ENST00000488087 DNAJA2O60884 412 aa6.09□□□□□ -1.43
ECHDC1-217ENST00000488087 CST3P01034 146 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-217ENST00000488087 IGLV1-40P01703 118 aa6.09□□□□□ -1.43
ECHDC1-217ENST00000488087 FAM87AP0C7U9 286 aa6.09□□□□□ -1.43
ECHDC1-217ENST00000488087 RAG1P15918 1043 aa6.09□□□□□ -1.43
ECHDC1-217ENST00000488087 ADMP35318 185 aa6.09□□□□□ -1.43
ECHDC1-217ENST00000488087 CAP2P40123 477 aa6.09□□□□□ -1.43
ECHDC1-217ENST00000488087 OVOS1Q6IE37 1185 aa6.09□□□□□ -1.43
ECHDC1-217ENST00000488087 ZAR1Q86SH2 424 aa6.09□□□□□ -1.43
ECHDC1-217ENST00000488087 NBPF11Q86T75 865 aa6.09□□□□□ -1.43
ECHDC1-217ENST00000488087 TMEM40Q8WWA1 233 aa6.09□□□□□ -1.43
ECHDC1-217ENST00000488087 ANAPC16Q96DE5 110 aa6.09□□□□□ -1.43
ECHDC1-217ENST00000488087 TANGO6Q9C0B7 1094 aa6.09□□□□□ -1.43
ECHDC1-217ENST00000488087 ANTXR1Q9H6X2 564 aa6.09□□□□□ -1.43
ECHDC1-217ENST00000488087 STRIP2Q9ULQ0 834 aa6.09□□□□□ -1.43
ECHDC1-217ENST00000488087 WDR64B1ANS9 1081 aa6.08□□□□□ -1.44
ECHDC1-217ENST00000488087 CHMP4BP1P59074 171 aa6.08□□□□□ -1.44
ECHDC1-217ENST00000488087 CYP27C1Q4G0S4 372 aa6.08□□□□□ -1.44
ECHDC1-217ENST00000488087 NLRC3Q7RTR2 1065 aa6.08□□□□□ -1.44
ECHDC1-217ENST00000488087 SLFN12Q8IYM2 578 aa6.08□□□□□ -1.44
ECHDC1-217ENST00000488087 DUSP23Q9BVJ7 150 aa6.08□□□□□ -1.44
ECHDC1-217ENST00000488087 OSBPL1AQ9BXW6 950 aa6.08□□□□□ -1.44
ECHDC1-217ENST00000488087 ZFP64Q9NPA5 681 aa6.08□□□□□ -1.44
ECHDC1-217ENST00000488087 ATG3Q9NT62 314 aa6.08□□□□□ -1.44
ECHDC1-217ENST00000488087 MRVI1Q9Y6F6 885 aa6.08□□□□□ -1.44
ECHDC1-217ENST00000488087 FAM170BA6NMN3 283 aa6.07□□□□□ -1.44
ECHDC1-217ENST00000488087 LEFTY1O75610 366 aa6.07□□□□□ -1.44
ECHDC1-217ENST00000488087 F13BP05160 661 aa6.07□□□□□ -1.44
ECHDC1-217ENST00000488087 FGRP09769 529 aa6.07□□□□□ -1.44
ECHDC1-217ENST00000488087 GBP1P32455 592 aa6.07□□□□□ -1.44
ECHDC1-217ENST00000488087 CYP27A1Q02318 531 aa6.07□□□□□ -1.44
ECHDC1-217ENST00000488087 SF3A1Q15459 793 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-217ENST00000488087 DUSP27Q5VZP5 1158 aa6.07□□□□□ -1.44
ECHDC1-217ENST00000488087 LETMD1Q6P1Q0 360 aa6.07□□□□□ -1.44
ECHDC1-217ENST00000488087 MCF2L2Q86YR7 1114 aa6.07□□□□□ -1.44
ECHDC1-217ENST00000488087 SHKBP1Q8TBC3 707 aa6.07□□□□□ -1.44
ECHDC1-217ENST00000488087 CYB5D2Q8WUJ1 264 aa6.07□□□□□ -1.44
ECHDC1-217ENST00000488087 ATG4CQ96DT6 458 aa6.07□□□□□ -1.44
ECHDC1-217ENST00000488087 CCDC74BQ96LY2 380 aa6.07□□□□□ -1.44
ECHDC1-217ENST00000488087 GMLQ99445 158 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms