RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 JMYQ8N9B5 988 aa20.48■□□□□ 0.87
SHROOM1-205ENST00000488072 DDRGK1Q96HY6 314 aa20.48■□□□□ 0.87
SHROOM1-205ENST00000488072 MS4A4AQ96JQ5 239 aa20.48■□□□□ 0.87
SHROOM1-205ENST00000488072 PTPN18Q99952 460 aa20.48■□□□□ 0.87
SHROOM1-205ENST00000488072 NBPF3Q9H094 633 aa20.48■□□□□ 0.87
SHROOM1-205ENST00000488072 TSKSQ9UJT2 592 aa20.48■□□□□ 0.87
SHROOM1-205ENST00000488072 ZBTB21Q9ULJ3 1066 aa20.48■□□□□ 0.87
SHROOM1-205ENST00000488072 GTF3C3Q9Y5Q9 886 aa20.48■□□□□ 0.87
SHROOM1-205ENST00000488072 SGSM2O43147 1006 aa20.47■□□□□ 0.87
SHROOM1-205ENST00000488072 TICAM2Q86XR7 235 aa20.47■□□□□ 0.87
SHROOM1-205ENST00000488072 NACAP1Q9BZK3 213 aa20.47■□□□□ 0.87
SHROOM1-205ENST00000488072 PICK1Q9NRD5 415 aa20.47■□□□□ 0.87
SHROOM1-205ENST00000488072 TRIM75PA6NK02 468 aa20.46■□□□□ 0.87
SHROOM1-205ENST00000488072 MPHOSPH10O00566 681 aaKnown RBP20.46■□□□□ 0.87
SHROOM1-205ENST00000488072 SEPT2Q15019 361 aa20.46■□□□□ 0.87
SHROOM1-205ENST00000488072 ALX1Q15699 326 aa20.46■□□□□ 0.87
SHROOM1-205ENST00000488072 BRI3BPQ8WY22 251 aa20.46■□□□□ 0.87
SHROOM1-205ENST00000488072 AFG3L2Q9Y4W6 797 aa20.46■□□□□ 0.87
SHROOM1-205ENST00000488072 TAF6LQ9Y6J9 622 aa20.46■□□□□ 0.87
SHROOM1-205ENST00000488072 UNCXA6NJT0 531 aa20.45■□□□□ 0.86
SHROOM1-205ENST00000488072 IGF2BP3O00425 579 aaKnown RBP eCLIP20.45■□□□□ 0.86
SHROOM1-205ENST00000488072 RASA1P20936 1047 aa20.45■□□□□ 0.86
SHROOM1-205ENST00000488072 MAP2K2P36507 400 aa20.45■□□□□ 0.86
SHROOM1-205ENST00000488072 PPATQ06203 517 aa20.45■□□□□ 0.86
SHROOM1-205ENST00000488072 PPIL2Q13356 520 aa20.45■□□□□ 0.86
SHROOM1-205ENST00000488072 MOGSQ13724 837 aa20.45■□□□□ 0.86
SHROOM1-205ENST00000488072 ABCB5Q2M3G0 1257 aa20.45■□□□□ 0.86
SHROOM1-205ENST00000488072 TBC1D10CQ8IV04 446 aa20.45■□□□□ 0.86
SHROOM1-205ENST00000488072 ACER1Q8TDN7 264 aa20.45■□□□□ 0.86
SHROOM1-205ENST00000488072 ESYT1Q9BSJ8 1104 aa20.45■□□□□ 0.86
SHROOM1-205ENST00000488072 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.45■□□□□ 0.86
SHROOM1-205ENST00000488072 R3HDMLQ9H3Y0 253 aa20.45■□□□□ 0.86
SHROOM1-205ENST00000488072 ZBTB48P10074 688 aaPredicted RBP20.44■□□□□ 0.86
SHROOM1-205ENST00000488072 SPP2Q13103 211 aa20.44■□□□□ 0.86
SHROOM1-205ENST00000488072 RAB3GAP1Q15042 981 aa20.44■□□□□ 0.86
SHROOM1-205ENST00000488072 FAM47AQ5JRC9 791 aa20.44■□□□□ 0.86
SHROOM1-205ENST00000488072 THSD7BQ9C0I4 1608 aa20.44■□□□□ 0.86
SHROOM1-205ENST00000488072 CCL15-CCL14A0A0B4J2E2 113 aa20.43■□□□□ 0.86
SHROOM1-205ENST00000488072 CDC45O75419 566 aa20.43■□□□□ 0.86
SHROOM1-205ENST00000488072 CCL15Q16663 113 aa20.43■□□□□ 0.86
SHROOM1-205ENST00000488072 SIAH1Q8IUQ4 282 aa20.43■□□□□ 0.86
SHROOM1-205ENST00000488072 AMOTL1Q8IY63 956 aa20.43■□□□□ 0.86
SHROOM1-205ENST00000488072 WBP1LQ9NX94 342 aa20.43■□□□□ 0.86
SHROOM1-205ENST00000488072 SWAP70Q9UH65 585 aa20.43■□□□□ 0.86
SHROOM1-205ENST00000488072 KCNH4Q9UQ05 1017 aa20.43■□□□□ 0.86
SHROOM1-205ENST00000488072 ROBO3Q96MS0 1386 aa20.43■□□□□ 0.86
SHROOM1-205ENST00000488072 DOCK1Q14185 1865 aa20.42■□□□□ 0.86
SHROOM1-205ENST00000488072 USP17L5A8MUK1 530 aa20.42■□□□□ 0.86
SHROOM1-205ENST00000488072 HSPA1AP0DMV8 641 aaKnown RBP20.42■□□□□ 0.86
SHROOM1-205ENST00000488072 HSPA1BP0DMV9 641 aaKnown RBP20.42■□□□□ 0.86
SHROOM1-205ENST00000488072 FAM43AQ8N2R8 423 aa20.42■□□□□ 0.86
SHROOM1-205ENST00000488072 DSCC1Q9BVC3 393 aa20.42■□□□□ 0.86
SHROOM1-205ENST00000488072 LSG1Q9H089 658 aaKnown RBP20.42■□□□□ 0.86
SHROOM1-205ENST00000488072 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.42■□□□□ 0.86
SHROOM1-205ENST00000488072 A0A1W2PRG0 241 aa20.41■□□□□ 0.86
SHROOM1-205ENST00000488072 FOXN1O15353 648 aa20.41■□□□□ 0.86
SHROOM1-205ENST00000488072 TM4SF4P48230 202 aa20.41■□□□□ 0.86
SHROOM1-205ENST00000488072 ZYXQ15942 572 aaKnown RBP20.41■□□□□ 0.86
SHROOM1-205ENST00000488072 RUFY2Q8WXA3 655 aa20.41■□□□□ 0.86
SHROOM1-205ENST00000488072 MKNK2Q9HBH9 465 aa20.41■□□□□ 0.86
SHROOM1-205ENST00000488072 RNF186Q9NXI6 227 aa20.41■□□□□ 0.86
SHROOM1-205ENST00000488072 RAD50Q92878 1312 aa20.41■□□□□ 0.86
SHROOM1-205ENST00000488072 TESPA1A2RU30 521 aaPredicted RBP20.4■□□□□ 0.86
SHROOM1-205ENST00000488072 MANSC4A6NHS7 340 aaPredicted RBP20.4■□□□□ 0.86
SHROOM1-205ENST00000488072 BTBD19C9JJ37 291 aa20.4■□□□□ 0.86
SHROOM1-205ENST00000488072 TRPA1O75762 1119 aa20.4■□□□□ 0.86
SHROOM1-205ENST00000488072 ASNSP08243 561 aa20.4■□□□□ 0.86
SHROOM1-205ENST00000488072 MFAP1P55081 439 aaKnown RBP20.4■□□□□ 0.86
SHROOM1-205ENST00000488072 SNAPC2Q13487 334 aa20.4■□□□□ 0.86
SHROOM1-205ENST00000488072 MTMR2Q13614 643 aa20.4■□□□□ 0.86
SHROOM1-205ENST00000488072 COL9A3Q14050 684 aaPredicted RBP20.4■□□□□ 0.86
SHROOM1-205ENST00000488072 KIAA1755Q5JYT7 1200 aa20.4■□□□□ 0.86
SHROOM1-205ENST00000488072 GPAT2Q6NUI2 795 aa20.4■□□□□ 0.86
SHROOM1-205ENST00000488072 IFNL1Q8IU54 200 aa20.4■□□□□ 0.86
SHROOM1-205ENST00000488072 ZNF280CQ8ND82 737 aa20.4■□□□□ 0.86
SHROOM1-205ENST00000488072 PHIPQ8WWQ0 1821 aa20.4■□□□□ 0.86
SHROOM1-205ENST00000488072 ANAPC4Q9UJX5 808 aa20.4■□□□□ 0.86
SHROOM1-205ENST00000488072 ATAD5Q96QE3 1844 aa20.39■□□□□ 0.86
SHROOM1-205ENST00000488072 NEDD4P46934 1319 aa20.39■□□□□ 0.85
SHROOM1-205ENST00000488072 NMT2O60551 498 aa20.39■□□□□ 0.85
SHROOM1-205ENST00000488072 TBC1D8O95759 1140 aa20.39■□□□□ 0.85
SHROOM1-205ENST00000488072 GTF2A2P52657 109 aa20.39■□□□□ 0.85
SHROOM1-205ENST00000488072 HMGCS2P54868 508 aa20.39■□□□□ 0.85
SHROOM1-205ENST00000488072 RRP12Q5JTH9 1297 aaKnown RBP20.39■□□□□ 0.85
SHROOM1-205ENST00000488072 TREML2Q5T2D2 321 aa20.39■□□□□ 0.85
SHROOM1-205ENST00000488072 GADL1Q6ZQY3 521 aa20.39■□□□□ 0.85
SHROOM1-205ENST00000488072 CABP5Q9NP86 173 aa20.39■□□□□ 0.85
SHROOM1-205ENST00000488072 LAMB1P07942 1786 aa20.39■□□□□ 0.85
SHROOM1-205ENST00000488072 ZMYM6O95789 1325 aa20.38■□□□□ 0.85
SHROOM1-205ENST00000488072 A0A0G2JLL6 359 aaPredicted RBP20.38■□□□□ 0.85
SHROOM1-205ENST00000488072 CXCL11O14625 94 aa20.38■□□□□ 0.85
SHROOM1-205ENST00000488072 PRRT2Q7Z6L0 340 aaPredicted RBP20.38■□□□□ 0.85
SHROOM1-205ENST00000488072 CHMP4CQ96CF2 233 aa20.38■□□□□ 0.85
SHROOM1-205ENST00000488072 WDR18Q9BV38 432 aa20.38■□□□□ 0.85
SHROOM1-205ENST00000488072 EMILIN3Q9NT22 766 aa20.38■□□□□ 0.85
SHROOM1-205ENST00000488072 RBM8AQ9Y5S9 174 aaKnown RBP20.38■□□□□ 0.85
SHROOM1-205ENST00000488072 TFAP4Q01664 338 aa20.37■□□□□ 0.85
SHROOM1-205ENST00000488072 ATP2B2Q01814 1243 aa20.37■□□□□ 0.85
SHROOM1-205ENST00000488072 MAP4K1Q92918 833 aa20.37■□□□□ 0.85
SHROOM1-205ENST00000488072 ANO2Q9NQ90 1003 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms